FC868535
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYNC1_ARATH (Asparaginyl-tRNA synthetase, cytoplasmic 1 OS=Arabidopsis thaliana GN=SYNC1 PE=2 SV=1) HSP 1 Score: 238.81 bits (608), Expect = 2.012e-62 Identity = 124/191 (64.92%), Postives = 153/191 (80.10%), Query Frame = 3 Query: 126 MADNELP-VDQVATMDLNDDA--VQRHQFSDRVLIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVPTGTCVYVEGMLKNPP--EGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 MAD +P Q+A + L +D VQR QFS+RVLI++IL RPDGGAGLAGQ VR+GGWVK+GR+QGK +F+FL VNDGSCPANLQV+VD + D+ LV TGTCV V+G+LK PP +GT+Q+IEL V KV+DVG VD +KYP+PKTKLTLE LRD + R RTN+I+AVARIRNALA+ATH+F Q+ FL Sbjct: 1 MADEIVPPATQLAAVSLENDGSTVQRAQFSNRVLIRTILDRPDGGAGLAGQTVRIGGWVKSGRDQGKRTFSFLAVNDGSCPANLQVMVDPSLYDVSNLVATGTCVTVDGVLKVPPKGKGTQQQIELNVVKVIDVGTVDASKYPLPKTKLTLETLRDVLHLRSRTNSISAVARIRNALAFATHSFFQEHSFL 191
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYNC3_ARATH (Asparaginyl-tRNA synthetase, cytoplasmic 3 OS=Arabidopsis thaliana GN=SYNC3 PE=2 SV=1) HSP 1 Score: 231.491 bits (589), Expect = 3.213e-60 Identity = 122/184 (66.30%), Postives = 145/184 (78.80%), Query Frame = 3 Query: 144 PVDQVATMDLNDDA--VQRHQFSDRVLIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVPTGTCVYVEGMLKNPPE--GTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 P +Q+A +L +D VQ+ QFSDRVLI+SIL GGA LAGQ+VR+GGWVKTGR+QGKG+FAFLEVNDGSCPANLQV+VD + DL +LV TGTCV V+G+LK PPE G KQ IEL V+ V+ VG VDP YP+PKTKLT EFLRD + R RTN I+AVARIRNALA+ATH+F Q+ FL Sbjct: 8 PANQLAADNLENDGSTVQKAQFSDRVLIRSIL---GGGAKLAGQKVRIGGWVKTGRQQGKGTFAFLEVNDGSCPANLQVMVDSSLYDLSRLVATGTCVTVDGVLKIPPEGKGLKQSIELSVETVIAVGTVDPTTYPLPKTKLTPEFLRDVLHLRSRTNLISAVARIRNALAFATHSFFQEHSFL 188
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYNO_ARATH (Asparaginyl-tRNA synthetase, chloroplastic/mitochondrial OS=Arabidopsis thaliana GN=SYNO PE=2 SV=3) HSP 1 Score: 132.494 bits (332), Expect = 2.031e-30 Identity = 72/166 (43.37%), Postives = 102/166 (61.45%), Query Frame = 3 Query: 198 QFSDRVLIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL----VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 +F ++ I + D G GQ + + GWV+T R Q S F+E+NDGSC +NLQ ++ D Q+ + TG V V+G + +GTKQK+EL+V+K++ VG D + YPI K +++ EFLR + RPRTNT AVAR+RN LAYATH F Q+ GF+ Sbjct: 87 EFRKKLRIAEVKGGADEGLSRVGQSLNIMGWVRTLRSQS--SVTFIEINDGSCLSNLQCVMTSDAEGYDQVESGSILTGASVSVQGTIV-ASQGTKQKVELKVEKIIVVGECD-SSYPIQKKRVSREFLRTKAHLRPRTNTFGAVARVRNTLAYATHKFFQESGFV 248
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_DESPS (Asparaginyl-tRNA synthetase OS=Desulfotalea psychrophila GN=asnS PE=3 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 3.585e-27 Identity = 67/141 (47.52%), Postives = 88/141 (62.41%), Query Frame = 3 Query: 267 QQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVP---TGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 Q V V GW++T R+ G F+FLEVNDGS N+QVI DK + + + V TG V VEG+LK P Q +E+ V VG DP YP+ K + +LEFLR+ RPRTN I+AVAR+R+ L+YA H F Q++GF Sbjct: 16 QVVTVAGWIRTRRDTG--DFSFLEVNDGSTLINMQVIADKSLGNYEEEVKKLSTGCSVMVEGVLKESP-AKGQSVEVHASSVTVVGWADPETYPLQKKRHSLEFLREISHLRPRTNAISAVARVRSRLSYAVHNFFQEKGF 153
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_SYNFM (Asparaginyl-tRNA synthetase OS=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) GN=asnS PE=3 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 7.987e-27 Identity = 66/142 (46.48%), Postives = 87/142 (61.27%), Query Frame = 3 Query: 264 GQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL---VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 G+ VR GWV+T R+ K +F+E+NDGSC NLQV+ D+ + QL + TG V VEG + P G Q IEL+ ++ G DPA YP+ K + + EFLR RPRTNTI AV+R+RN L+YA H F Q +GF Sbjct: 19 GKTVRAQGWVRTKRDS-KAGVSFIELNDGSCLRNLQVVADQGHPEYRQLLESITTGCAVMVEGSIAYSP-GKGQTIELKADRITLYGTADPAVYPLQKKRHSFEFLRQIGHLRPRTNTIGAVSRVRNRLSYAIHQFFQDRGF 158
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_PARUW (Asparaginyl-tRNA synthetase OS=Protochlamydia amoebophila (strain UWE25) GN=asnS PE=3 SV=1) HSP 1 Score: 119.783 bits (299), Expect = 1.362e-26 Identity = 68/161 (42.24%), Postives = 91/161 (56.52%), Query Frame = 3 Query: 210 RVLIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLV---PTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 R IKS+ L G + + GWV+T R Q +F F+E+NDGS +N Q+I D+A QL+ TG V G + P G +Q +E++ + +G DP Y + K + T EFLR RPRTNTI AV R+RNALA+ATH F QK+GFL Sbjct: 2 RTKIKSLRGTTPEVRALIGHDITLKGWVRTVRNQK--TFTFIEINDGSTLSNFQIIATPDIAGYDQLINQLSTGVSVSAIGTIVESP-GKEQNLEMQATAITIIGKCDPEVYLLQKKRHTFEFLRSIAHLRPRTNTIGAVTRVRNALAFATHQFFQKRGFL 159
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_SYNY3 (Asparaginyl-tRNA synthetase OS=Synechocystis sp. (strain PCC 6803) GN=asnS PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 3.035e-26 Identity = 69/146 (47.26%), Postives = 90/146 (61.64%), Query Frame = 3 Query: 255 GLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQLVP---TGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 G A QV V GW++T R F+F+EVNDGS ANLQV++D +AD +L+ TG + VEG L P G Q++EL+ K+ +G DP YP+ K + + EFLR RPRTNTI AV R+RNA A A H F Q++GFL Sbjct: 13 GQADDQVMVQGWLRTKRTLK--DFSFVEVNDGSSLANLQVVLDGSLADYDRLLSQLQTGAALVVEGKLA-PSPGKGQRVELKATKLELLGGADPGSYPLQKKRHSFEFLRTIGHLRPRTNTIGAVMRVRNACATAIHQFFQERGFL 155
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_TREDE (Asparaginyl-tRNA synthetase OS=Treponema denticola GN=asnS PE=3 SV=1) HSP 1 Score: 108.997 bits (271), Expect = 2.405e-23 Identity = 68/161 (42.24%), Postives = 89/161 (55.28%), Query Frame = 3 Query: 216 LIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVA------DLGQLVPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 LIK ILT GQ + V GWV+T RE + F+E+NDGSC A++Q D+D L + TG V V G L P Q++EL+ + G D KYP+ K + ++EFLRD R RTNT AVARIR+ +AYA HTF Q++GF Sbjct: 4 LIKDILTSEP-----KGQAIDVYGWVRTKRETK--NLVFIEINDGSCFASIQATFDRDTGLDNNTEALLKKAGTGVSVKVSGNLV-PSPAAGQRVELQANNIHIFGDADQEKYPLQKKRHSMEFLRDIAHLRARTNTFGAVARIRSQMAYAIHTFFQERGF 156
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_PORGI (Asparaginyl-tRNA synthetase OS=Porphyromonas gingivalis GN=asnS PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.102e-23 Identity = 58/144 (40.28%), Postives = 83/144 (57.64%), Query Frame = 3 Query: 255 GLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGF 680 GL GQ++ + GWV+T R G + F+ +NDGS N+Q++ D D Q+ + TG C+ V G L +G Q +E++ + G DPA YP+ K TLEFLR+ RPRTNT A+ RIR+ +A A HTF +G+ Sbjct: 17 GLVGQEINIKGWVRTKR--GNKAVNFIALNDGSTIHNMQIVADLASFDAAQMSQITTGACIGVIGTLVES-QGAGQSVEVQASAIEIYGTADPATYPLQKKGHTLEFLREIAHLRPRTNTFGAIYRIRHHMAIAIHTFFHNKGY 157
BLAST of FC868535 vs. ExPASy Swiss-Prot
Match: SYN_GEOSL (Asparaginyl-tRNA synthetase OS=Geobacter sulfurreducens GN=asnS PE=3 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 4.102e-23 Identity = 70/162 (43.21%), Postives = 96/162 (59.26%), Query Frame = 3 Query: 204 SDRVLIKSILTRPDGGAGLAGQQVRVGGWVKTGREQGKGSFAFLEVNDGSCPANLQVIVDKDVADLGQL--VPTGTCVYVEGMLKNPPEGTKQKIELRVQKVVDVGMVDPAKYPIPKTKLTLEFLRDRIPFRPRTNTIAAVARIRNALAYATHTFLQKQGFL 683 ++R+ I+ IL AG +V V GWV+T R GKG AFL VNDGSC A+LQV+ + +A+ +L + TG V V G++ P Q +EL KVV VG D +YP+ K + T E+LR RPR+NT AV R+R++LA A H F ++GFL Sbjct: 2 NERIRIREILAGTP-----AGTEVIVKGWVRTSRV-GKG-VAFLAVNDGSCLASLQVVAEPGLANYHELRGIGTGAAVAVRGIVAESP-AAGQAVELHATKVVVVGGADE-QYPLQKKRHTFEYLRTIAHLRPRSNTFGAVFRVRSSLAQAVHRFFAERGFL 154 The following BLAST results are available for this feature:
BLAST of FC868535 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 168
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868535 ID=FC868535; Name=FC868535; organism=Citrus clementina; type=EST; length=683bpback to top |