FC868570
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868570 vs. ExPASy Swiss-Prot
Match: VATH_ARATH (V-type proton ATPase subunit H OS=Arabidopsis thaliana GN=VHA-H PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 6.678e-64 Identity = 116/152 (76.32%), Postives = 129/152 (84.87%), Query Frame = 2 Query: 149 MDHAELTTEQVLKRDIPWETYMTTKLISGTGLQLLRRYDNRSESHRAQLLDDDGPSYVRVFVSILRDIYKEETVEYVLALIDEMLTANPKRARLFHDKSLASEDTYEPFLRLLRKGNWFIQEKSCKILASIVSARPKPQDRFFANGEASIQK 604 MD AEL+ EQVLKRDIPWETYM TKL+S GLQLLRRYD + ES RAQLLD+DGP+YV +FVSILRDI+KEETVEYVLALI EML+ANP RARLFHD+SLA+EDTYEPFLRLL KGNWFIQEKSCKILA I+SARPK + NG + K Sbjct: 1 MDQAELSIEQVLKRDIPWETYMNTKLVSAKGLQLLRRYDKKPESARAQLLDEDGPAYVHLFVSILRDIFKEETVEYVLALIYEMLSANPTRARLFHDESLANEDTYEPFLRLLWKGNWFIQEKSCKILAWIISARPKAGNAVIGNGIDDVLK 152 HSP 2 Score: 33.8834 bits (76), Expect = 6.678e-64 Identity = 14/16 (87.50%), Postives = 15/16 (93.75%), Query Frame = 3 Query: 633 KILVEWLCAQLKKPSH 680 K LVEWLCAQLK+PSH Sbjct: 152 KGLVEWLCAQLKQPSH 167
BLAST of FC868570 vs. ExPASy Swiss-Prot
Match: VATH_ORYSJ (Probable V-type proton ATPase subunit H OS=Oryza sativa subsp. japonica GN=Os07g0549700 PE=2 SV=1) HSP 1 Score: 231.876 bits (590), Expect = 2.527e-62 Identity = 114/153 (74.51%), Postives = 129/153 (84.31%), Query Frame = 2 Query: 149 MDHAELTTEQVLKRDIPWETYMTTKLISGTGLQLLRRYDNRSESHRAQLLDDDGPSYVRVFVSILRDIYKEETVEYVLALIDEMLTANPKRARLFHDKSLASEDTYEPFLRLLRKGNWFIQEKSCKILASIVSARPKPQDRFFANGEASIQKA 607 MDHAELTTEQVLKRDIPWE+YM KLISGT LQLLRRYD++ ES R LLD+DGPSYVRVF++ILR+I KE+TVEYVLALIDEML NPKRA LF+D SL+ ED Y+PFLRLL KGNWF+QEKSCKIL I+SARPK Q+ NGEAS K+ Sbjct: 1 MDHAELTTEQVLKRDIPWESYMANKLISGTCLQLLRRYDHKPESQRGPLLDEDGPSYVRVFLNILRNISKEDTVEYVLALIDEMLAVNPKRAALFYDNSLSGEDIYDPFLRLLLKGNWFVQEKSCKILTQIISARPKMQNGIVPNGEASNSKS 153 HSP 2 Score: 28.4906 bits (62), Expect = 2.527e-62 Identity = 9/14 (64.29%), Postives = 13/14 (92.86%), Query Frame = 3 Query: 639 LVEWLCAQLKKPSH 680 LV+WLC+QL+ P+H Sbjct: 165 LVDWLCSQLRNPTH 178 HSP 3 Score: 21.1718 bits (43), Expect = 2.527e-62 Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1 Query: 595 NSKSKSTTIDDVLK 636 NSKSK T+ DVL+ Sbjct: 150 NSKSKLTSTQDVLR 163
BLAST of FC868570 vs. ExPASy Swiss-Prot
Match: VATH_HUMAN (V-type proton ATPase subunit H OS=Homo sapiens GN=ATP6V1H PE=1 SV=1) HSP 1 Score: 72.7886 bits (177), Expect = 2.010e-12 Identity = 34/126 (26.98%), Postives = 74/126 (58.73%), Query Frame = 2 Query: 176 QVLKRDIPWETYMTTKLISGTGLQLLRRYD-NRSESHRAQLLDDDGPSYVRVFVSILRDIYKEETVEYVLALIDEMLTANPKRARLFHDKSLASEDTYEP-FLRLLRKGNWFIQEKSCKILASIVS 547 +V + W++Y+ ++IS + ++R++ RS + ++L +G + F++++ I KE+TV+Y+L ++D+ML N +R +F D + S++T P FL +L + + F + +I+A + + Sbjct: 25 EVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTFINLMTHICKEQTVQYILTMVDDMLQENHQRVSIFFDYARCSKNTAWPYFLPMLNRQDPFTVHMAARIIAKLAA 150
BLAST of FC868570 vs. ExPASy Swiss-Prot
Match: VATH_MOUSE (V-type proton ATPase subunit H OS=Mus musculus GN=Atp6v1h PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.429e-12 Identity = 34/126 (26.98%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 176 QVLKRDIPWETYMTTKLISGTGLQLLRRYD-NRSESHRAQLLDDDGPSYVRVFVSILRDIYKEETVEYVLALIDEMLTANPKRARLFHDKSLASEDTYEP-FLRLLRKGNWFIQEKSCKILASIVS 547 +V + W++Y+ ++IS + ++R++ RS + ++L +G + F++++ I KE+TV+Y+L ++D+ML N +R +F D + S+ T P FL +L + + F + +I+A + + Sbjct: 25 EVRANKVNWQSYLQGQMISAEDCEFIQRFEMKRSSEDKQEMLQTEGSQCAKTFINLMTHISKEQTVQYILTMVDDMLQENHQRVSIFFDYAKRSKSTAWPYFLPMLNRQDPFTVHMAARIIAKLAA 150
BLAST of FC868570 vs. ExPASy Swiss-Prot
Match: VATH_MANSE (V-type proton ATPase subunit H OS=Manduca sexta PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 35/147 (23.81%), Postives = 80/147 (54.42%), Query Frame = 2 Query: 131 LSILASMDHAELTTEQVLKRDIPWETYMTTKLISGTGLQLLRRYDNRSESHRAQLLDDDGPSYVRVFVSILRDIYKEETVEYVLALIDEMLTANPKRARLFHDKSLASEDTYEPFLRLLRKGNWFIQEKSCKILASIVSARPKPQDR 571 + ++A+ ++ ++ + I W++Y+ ++I+ + D R + L D + + VF+++L I K+ T++Y+L LID++L+ + R ++F + S + ++PFL LL + + F+Q + +I+A + P+ D+ Sbjct: 21 IDMIAATSVLQIRASEIRQTQINWQSYLQGQMITQRDHDFIVNLDQRGQK---DLPDKNPDACADVFLNLLTHISKDHTIQYILVLIDDILSEDKSRVKIFRETKY-SGNIWQPFLNLLNRQDEFVQHMTARIIAKLACWHPQLMDK 163
BLAST of FC868570 vs. ExPASy Swiss-Prot
Match: VATH_BOVIN (V-type proton ATPase subunit H OS=Bos taurus GN=ATP6V1H PE=2 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 9.977e-12 Identity = 33/126 (26.19%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 176 QVLKRDIPWETYMTTKLISGTGLQLLRRYD-NRSESHRAQLLDDDGPSYVRVFVSILRDIYKEETVEYVLALIDEMLTANPKRARLFHDKSLASEDT-YEPFLRLLRKGNWFIQEKSCKILASIVS 547 +V + W++Y+ ++IS + ++R++ RS + ++L +G + F++++ I KE+TV+Y+L L+D+ L N +R +F D + S++T + FL +L + + F + +I+A + + Sbjct: 25 EVRANKVNWQSYLQGQMISSEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTFINLMTHISKEQTVQYILTLVDDTLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLFTVHMAARIIAKLAA 150
BLAST of FC868570 vs. ExPASy Swiss-Prot
Match: VATH_PIG (V-type proton ATPase subunit H OS=Sus scrofa GN=ATP6V1H PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.702e-11 Identity = 32/126 (25.40%), Postives = 73/126 (57.94%), Query Frame = 2 Query: 176 QVLKRDIPWETYMTTKLISGTGLQLLRRYD-NRSESHRAQLLDDDGPSYVRVFVSILRDIYKEETVEYVLALIDEMLTANPKRARLFHDKSLASEDT-YEPFLRLLRKGNWFIQEKSCKILASIVS 547 +V + W++Y+ ++IS + ++R++ RS + ++L +G + F++++ I KE+TV+Y+L ++D+ L N +R +F D + S++T + FL +L + + F + +I+A + + Sbjct: 25 EVRANKVNWQSYLQGQMISSEDCEFIQRFEMKRSPEEKQEMLQTEGSQCAKTFINLMTHISKEQTVQYILTMVDDTLQENHQRVSIFFDYAKRSKNTAWSYFLPMLNRQDLFTVHMAARIIAKLAA 150 The following BLAST results are available for this feature:
BLAST of FC868570 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868570 ID=FC868570; Name=FC868570; organism=Citrus clementina; type=EST; length=700bpback to top |