FC868588
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: SF21_HELAN (Pollen-specific protein SF21 OS=Helianthus annuus GN=SF21 PE=2 SV=1) HSP 1 Score: 303.523 bits (776), Expect = 7.322e-82 Identity = 145/218 (66.51%), Postives = 176/218 (80.73%), Query Frame = 2 Query: 59 MADSSSDSVSIDMETPPPSGKDNLIKTSHGSLSVTIYGDQDKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSRXVRGNAQVPESDIVQACRRLLDERQS 712 MADS S+S+ + GK+++I+T GS+SVT+ GDQ+KP L+TYPDLALN+MSCFQGLF PE+ SLLLHNFCIYHINPPGHE GAA+I D+PV S++DL DQI VLN+F LG+VMCMG AGAYILTLF++KY RV GLIL+SP+CKAPSWTE YNK+ S LYYYGMC +VKELL+ RYFS+ V GN ++PESD+V ACR+LLDER S Sbjct: 1 MADSGH-SISVTFPSFHSGGKEHIIRTGCGSVSVTVCGDQEKPPLITYPDLALNHMSCFQGLFVSPESASLLLHNFCIYHINPPGHELGAASIGIDDPVPSIEDLCDQILVVLNYFRLGSVMCMGAMAGAYILTLFSIKYSERVTGLILISPICKAPSWTERFYNKLTSKTLYYYGMCDLVKELLIHRYFSKEVCGNPEIPESDMVLACRKLLDERDS 217
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG2_PANTR (Protein NDRG2 OS=Pan troglodytes GN=NDRG2 PE=2 SV=1) HSP 1 Score: 105.916 bits (263), Expect = 2.241e-22 Identity = 66/200 (33.00%), Postives = 107/200 (53.50%), Query Frame = 2 Query: 107 PPSGKDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR-XVRGNAQVPESDIVQACRRLL 697 P + K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++ NF H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL +A+ + V GL+L++ A W +W +K+ G+ + E++L FS+ + GN S+++Q R ++ Sbjct: 21 PEAAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKRWMDWAAHKLT-------GLTSSIPEMILGHLFSQEELSGN-----SELIQKYRNII 207
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG2_MACFA (Protein NDRG2 OS=Macaca fascicularis GN=NDRG2 PE=2 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.822e-22 Identity = 66/200 (33.00%), Postives = 108/200 (54.00%), Query Frame = 2 Query: 107 PPSGKDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR-XVRGNAQVPESDIVQACRRLL 697 P + K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF + ++ NF H++ PG E GA S+D LAD I VL + V+ +GV AGAYIL+ +A+ + V GL+L++ A W +W +K+ G+ + E++L FS+ + GN S+++Q R ++ Sbjct: 21 PEAAKIHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFGDMQEII-QNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTVIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEELSGN-----SELIQKYRNII 207
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG2_PONAB (Protein NDRG2 OS=Pongo abelii GN=NDRG2 PE=2 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.519e-22 Identity = 65/197 (32.99%), Postives = 106/197 (53.81%), Query Frame = 2 Query: 116 GKDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR-XVRGNAQVPESDIVQACRRLL 697 G+ + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++ NF H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL +A+ + V GL+L++ A W +W +K+ G+ + E++L FS+ + GN S+++Q R ++ Sbjct: 38 GQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEELSGN-----SELIQKYRNII 221
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG2_HUMAN (Protein NDRG2 OS=Homo sapiens GN=NDRG2 PE=1 SV=2) HSP 1 Score: 104.375 bits (259), Expect = 6.519e-22 Identity = 65/197 (32.99%), Postives = 106/197 (53.81%), Query Frame = 2 Query: 116 GKDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR-XVRGNAQVPESDIVQACRRLL 697 G+ + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF E ++ NF H++ PG E GA S+D LAD I VL + ++ +GV AGAYIL +A+ + V GL+L++ A W +W +K+ G+ + E++L FS+ + GN S+++Q R ++ Sbjct: 38 GQTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQF-EDMQEIIQNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCVLQYLNFSTIIGVGVGAGAYILARYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEELSGN-----SELIQKYRNII 221
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG2_BOVIN (Protein NDRG2 OS=Bos taurus GN=NDRG2 PE=2 SV=1) HSP 1 Score: 103.99 bits (258), Expect = 8.515e-22 Identity = 63/200 (31.50%), Postives = 107/200 (53.50%), Query Frame = 2 Query: 107 PPSGKDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR-XVRGNAQVPESDIVQACRRLL 697 P K + ++T +GS++ T+YG +PA++TY D+ LNY SCFQ LF + ++ NF H++ PG E GA S+D LAD I +L + ++ +GV AGAY+L+ +A+ + V GL+L++ A W +W +K+ G+ + E++L FS+ + GN S+++Q R ++ Sbjct: 21 PEVAKTHSVETPYGSVTFTVYGTPKPKRPAILTYHDVGLNYKSCFQPLFQFADMQEII-QNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGIGVGAGAYVLSRYALTHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSISEMILGHLFSQEELSGN-----SELIQKYRNII 207
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG2_RAT (Protein NDRG2 OS=Rattus norvegicus GN=Ndrg2 PE=1 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.226e-21 Identity = 64/197 (32.49%), Postives = 105/197 (53.30%), Query Frame = 2 Query: 116 GKDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR-XVRGNAQVPESDIVQACRRLL 697 G+ + ++T +GS++ T+YG +PA+ TY D+ LNY SCFQ LF + ++ NF H++ PG E GA S D LAD I +L + ++ +GV AGAYIL+ +A+ + V GL+L++ A W +W +K+ G+ + E++L FS+ + GN S+++Q R L+ Sbjct: 38 GQTHSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFQFGDMQEII-QNFVRVHVDAPGMEEGAPVFPLGYQYPSQDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPEMILGHLFSQEELSGN-----SELIQKYRSLI 221
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG2_MOUSE (Protein NDRG2 OS=Mus musculus GN=Ndrg2 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 9.414e-21 Identity = 59/184 (32.07%), Postives = 101/184 (54.89%), Query Frame = 2 Query: 116 GKDNLIKTSHGSLSVTIYGDQD--KPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR-XVRGNAQV 658 G+ + ++T +GS++ T+YG +PA+ TY D+ LNY SCFQ LF + ++ NF H++ PG E GA S+D LAD I +L + ++ +GV AGAYIL+ +A+ + V GL+L++ A W +W +K+ G+ + +++L FS+ + GN+++ Sbjct: 38 GQTHSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEII-QNFVRVHVDAPGMEEGAPVFPLGYQYPSLDQLADMIPCILQYLNFSTIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNAKGWMDWAAHKLT-------GLTSSIPDMILGHLFSQEELSGNSEL 213
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDRG1_BOVIN (Protein NDRG1 OS=Bos taurus GN=NDRG1 PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20 Identity = 52/145 (35.86%), Postives = 84/145 (57.93%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKV 559 I+T HGS+ VT+ G ++P ++TY D+ +N+ +C+ LF + + H F + H++ PG + GAA+ S+D LA+ + VL FGL +++ MG AGAYILT FA+ V GL+L++ A W +W +K+ Sbjct: 37 IETLHGSIHVTLCGTPKGNRPVILTYHDIGMNHKTCYNPLFNSEDMQEITQH-FAVCHVDAPGQQDGAASFPTGYMYPSMDQLAEMLPGVLQQFGLKSIIGMGTGAGAYILTRFALNNPEMVEGLVLINVNPCAEGWMDWAASKI 180
BLAST of FC868588 vs. ExPASy Swiss-Prot
Match: NDR1A_XENLA (Protein NDRG1-A OS=Xenopus laevis GN=ndrg1-A PE=2 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.739e-20 Identity = 58/182 (31.87%), Postives = 98/182 (53.85%), Query Frame = 2 Query: 131 IKTSHGSLSVTIYGDQ--DKPALVTYPDLALNYMSCFQGLFFCPEACSLLLHNFCIYHINPPGHEFGAAAISDDEPVLSVDDLADQIAEVLNHFGLGAVMCMGVTAGAYILTLFAMKYRHRVLGLILVSPLCKAPSWTEWLYNKVMSNLLYYYGMCGVVKELLLKRYFSR-XVRGNAQVPES 667 I+T+HG + VT+ G ++P ++TY D+ LN+ +CF LF + + H F + H++ PG + GAA+ S+D LA+ + V+ GL VM +G+ AGAYILT FA+ + V GL+L++ A W +W K+ G + ++++ FS+ V N ++ E+ Sbjct: 38 IETAHGIVHVTMCGTPKLNRPVILTYHDIGLNHKTCFNSLFNFEDMHEISQH-FSVCHVDAPGQQEGAASFPAGYMYPSMDQLAEMLPGVVQQLGLRTVMGLGIGAGAYILTRFALNHPSMVEGLVLININPCAEGWMDWAATKIS-------GWTNALPDMVISHLFSKDEVHSNPELVET 211 The following BLAST results are available for this feature:
BLAST of FC868588 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 33
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868588 ID=FC868588; Name=FC868588; organism=Citrus clementina; type=EST; length=722bpback to top |