FC868590

Overview
NameFC868590
Unique NameFC868590
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length386
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868590 vs. ExPASy Swiss-Prot
Match: RETOL_ARATH (Reticuline oxidase-like protein OS=Arabidopsis thaliana GN=At4g20830 PE=1 SV=2)

HSP 1 Score: 114.005 bits (284), Expect = 2.407e-25
Identity = 53/130 (40.77%), Postives = 84/130 (64.62%), Query Frame = 3
Query:    3 ESMGQDLFWAIRGGGGATFGIIVSWKIKLVAVPPTVTVFNVPRTLEQNATKLLFKWQCIADKAHEDLF----ISPLLLRVNSTMVSVFTALFLGGVDRLLPLMQDSFPELGLTRKDCREMTFVESIVYLD 380
            ++MG+DLFWAI GGGG ++G+++ +K+KLV VP  VTVF V + ++  A  ++ KWQ +  K   +LF    I P+  +   T+ +   ALFLG  D ++ L+   FPELGL +++C EMT+ +S ++ D
Sbjct:  226 KAMGEDLFWAITGGGGGSYGVVLGYKVKLVPVPSVVTVFRVEQYMDSGAVDMVHKWQSVGPKTDPNLFMRMLIQPVTRKKVKTVRASVVALFLGRADEVVALLSKEFPELGLKKENCSEMTWFQSALWWD 355          
BLAST of FC868590 vs. ExPASy Swiss-Prot
Match: RETO_PAPSO (Reticuline oxidase OS=Papaver somniferum GN=BBE1 PE=3 SV=1)

HSP 1 Score: 107.071 bits (266), Expect = 2.942e-23
Identity = 56/128 (43.75%), Postives = 80/128 (62.50%), Query Frame = 3
Query:    3 ESMGQDLFWAIRGGGGATFGIIVSWKIKLVAVPPTVTVFNVPRTLE-QNATKLLFKWQCIADKAHEDLFISPLLLRVNSTMVSVFTALFLGGVDRLLPLMQDSFPELGLTRKDCREMTFVESIVYLDG 383
            E MG D+FWAIRGGGG  +G I +WKIKL+ VP  +TVF V + +  ++A+ LL KWQ +AD+  ED  +S L     +    +F  L LG  D    ++ + FPELGL  K+ +EM++ ES+ +L G
Sbjct:  214 EKMGDDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKLTVFRVTKNVGIEDASSLLHKWQYVADELDEDFTVSVLGGVNGNDAWLMFLGLHLGRKDAAKTIIDEKFPELGLVDKEFQEMSWGESMAFLSG 341          
BLAST of FC868590 vs. ExPASy Swiss-Prot
Match: RETO_ESCCA (Reticuline oxidase OS=Eschscholzia californica GN=BBE1 PE=1 SV=1)

HSP 1 Score: 95.1301 bits (235), Expect = 1.157e-19
Identity = 56/129 (43.41%), Postives = 77/129 (59.69%), Query Frame = 3
Query:    3 ESMGQDLFWAIRGGGGATFGIIVSWKIKLVAVPPTVTVFNVPRTLE-QNATKLLFKWQCIADKAHEDLFISPLLLRVNSTMVSVFTALFLGGVDRLLPLMQD-SFPELGLTRKDCREMTFVESIVYLDG 383
            ++MG+D+FWAIRGGGG  +G I +WKIKL+ VP  VTVF V + +    AT LL KWQ +A++  ED  +S +L   +   V +    F  G+  +     D  FPELGL  +D  EM++ ES  YL G
Sbjct:  210 QAMGEDVFWAIRGGGGGVWGAIYAWKIKLLPVPEKVTVFRVTKNVAIDEATSLLHKWQFVAEELEEDFTLS-VLGGADEKQVWLTMLGFHFGLKTVAKSTFDLLFPELGLVEEDYLEMSWGESFAYLAG 337          
The following BLAST results are available for this feature:
BLAST of FC868590 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
RETOL_ARATH2.407e-2540.77Reticuline oxidase-like protein OS=Arabidopsis tha... [more]
RETO_PAPSO2.942e-2343.75Reticuline oxidase OS=Papaver somniferum GN=BBE1 P... [more]
RETO_ESCCA1.157e-1943.41Reticuline oxidase OS=Eschscholzia californica GN=... [more]
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Properties
Property NameValue
Genbank descriptionC31002C10EF AbioticL1 Citrus clementina cDNA clone C31002C10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868590 ID=FC868590; Name=FC868590; organism=Citrus clementina; type=EST; length=386bp
GAGAATCAATGGGACAAGATCTATTTTGGGCCATTCGCGGAGGCGGAGGA
GCTACCTTTGGAATCATTGTTTCGTGGAAAATAAAACTAGTTGCTGTTCC
ACCAACTGTGACGGTATTCAACGTCCCGAGAACCTTAGAACAAAATGCAA
CAAAACTACTTTTCAAATGGCAGTGCATTGCAGACAAGGCTCATGAAGAT
TTATTCATCTCACCCTTGTTATTACGAGTGAATTCCACTATGGTCTCTGT
ATTCACGGCCTTGTTTCTTGGTGGGGTTGACAGGCTGCTTCCATTGATGC
AAGACAGTTTTCCTGAGCTCGGTTTGACTAGAAAAGACTGCAGAGAAATG
ACTTTTGTTGAATCTATCGTCTATCTTGATGGATAT
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