FC868594

Overview
NameFC868594
Unique NameFC868594
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length656
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9346 contig Ccv1_Contig9346:138..793. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868594 vs. ExPASy Swiss-Prot
Match: DHGY_CUCSA (Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-A PE=2 SV=1)

HSP 1 Score: 378.252 bits (970), Expect = 1.984e-104
Identity = 186/218 (85.32%), Postives = 197/218 (90.37%), Query Frame = 2
Query:    2 PMPGTRWISLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDGWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKVVTAYGQFLKAHGEHPVTWKRASSMDEVLREADVI 655
            PMPGTRWI+LLIEQDCRVEICT+KKTILSVEDI+ALIGDKCDGVIGQLTEDWGE LF+ALSRAGGKAFSNMAVGYNNVDVNAANKYG+AVGNTPGV                 RRIVEADEFMRAG YDGWLPNLFVGNLLKGQT+GVIGAGRIGSAYARMMVEGFKMNLIY+DLYQ+TRLEK VTAYG+FLKA+GE PVTW+RASSMDEVLREADVI
Sbjct:   23 PMPGTRWINLLIEQDCRVEICTEKKTILSVEDILALIGDKCDGVIGQLTEDWGEVLFSALSRAGGKAFSNMAVGYNNVDVNAANKYGVAVGNTPGVLTETTAELAASLSLAAARRIVEADEFMRAGRYDGWLPNLFVGNLLKGQTVGVIGAGRIGSAYARMMVEGFKMNLIYFDLYQSTRLEKFVTAYGEFLKANGEAPVTWRRASSMDEVLREADVI 240          
BLAST of FC868594 vs. ExPASy Swiss-Prot
Match: GYAR_KORCO (Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8) GN=gyaR PE=3 SV=1)

HSP 1 Score: 92.8189 bits (229), Expect = 1.665e-18
Identity = 53/144 (36.81%), Postives = 78/144 (54.17%), Query Frame = 2
Query:  122 CDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD-GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEK 550
            CD ++  LT+     +F A  +   +  +  AVGY+N+DV  A K GI V NTPGV                 RR+VEAD ++R G +   W P + +G  + G+T+G++G GRIG+A AR   +GF M ++YYD  +    EK
Sbjct:   46 CDALVSLLTDPIDAEVFEAAPKL--RIVAQYAVGYDNIDVKEATKRGIYVTNTPGVLTETTADFAFALLMAAARRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVAR-RAKGFGMRILYYDSIRREDFEK 186          
BLAST of FC868594 vs. ExPASy Swiss-Prot
Match: GYAR_THELI (Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1)

HSP 1 Score: 92.0485 bits (227), Expect = 2.840e-18
Identity = 52/126 (41.27%), Postives = 71/126 (56.35%), Query Frame = 2
Query:  197 KAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKVVTA 562
            K  +  AVGY+N+D+  A K GI V NTPGV                 RRIVEAD F+R+G +     GW P +F+G  LKG+T+G++G GRIG A A+   +GF M +IYY   +    E+ + A
Sbjct:   69 KIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLAFALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAK-RAKGFGMKIIYYSRTRKPEAEEEIGA 193          
BLAST of FC868594 vs. ExPASy Swiss-Prot
Match: GYAR_PYRFU (Glyoxylate reductase OS=Pyrococcus furiosus GN=gyaR PE=3 SV=1)

HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18
Identity = 63/212 (29.72%), Postives = 106/212 (50.00%), Query Frame = 2
Query:   32 LIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKVVTAYGQFLKAHGEHPVTWKRASSMDEVLREADVI 655
            ++E++  VE+  +++ I   E ++  + D  D ++  L+E   + +F    R   +  +N AVGY+N+DV  A + GI V NTP V                 R +V+ D+F+R+G +      W P  F+G  L G+TIG++G GRIG A AR   +GF M ++YY   + ++ EK + A                    ++EVL+E+D +
Sbjct:   18 MLEEEFEVEVWEEEREIPR-EKLLEKVKD-VDALVTMLSERIDQEVFENAPRL--RIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTNATADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTIGIVGFGRIGQAIAR-RAKGFNMRILYYSRTRKSQAEKELGA----------------EYRPLEEVLKESDFV 208          
BLAST of FC868594 vs. ExPASy Swiss-Prot
Match: GYAR_PYRAB (Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR PE=3 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 8.264e-18
Identity = 65/212 (30.66%), Postives = 102/212 (48.11%), Query Frame = 2
Query:   32 LIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKVVTAYGQFLKAHGEHPVTWKRASSMDEVLREADVI 655
            ++E++  VE+   ++ I   E ++  + D  D ++  L+E     +F    R   +  +N AVGY+N+DV  A K GI V NTPGV                 R +V+ D+F R+G +      W P  F+G  + G+TIG+IG GRIG A A+    GF M ++YY   +   +EK + A                    +DE+LRE+D +
Sbjct:   19 MLEKEFEVEVWEDEREIPR-EILLEKVKD-VDALVTMLSERIDREVFERAPRL--RIVANYAVGYDNIDVEEATKRGIYVTNTPGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGFGRIGQAIAK-RARGFDMRILYYSRTRKPEVEKELNA----------------EFKPLDELLRESDFV 209          
BLAST of FC868594 vs. ExPASy Swiss-Prot
Match: GYAR_THEON (Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1) GN=gyaR PE=3 SV=1)

HSP 1 Score: 88.9669 bits (219), Expect = 2.405e-17
Identity = 64/212 (30.19%), Postives = 107/212 (50.47%), Query Frame = 2
Query:   32 LIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKVVTAYGQFLKAHGEHPVTWKRASSMDEVLREADVI 655
            ++ +   VE+   +  I S E ++  + D  D ++  L+E     +F A  R   K  +N AVGY+N+D+  A K G+ + NTP V                 RR++EAD+F+R+G +      W P +F+G  + G+TIG++G GRIG A AR   +GF M ++Y    +   +EK + A  +F+               +DE+L+E+D +
Sbjct:   18 MLREHFEVEVWEDEHEI-SREVLLEKVRD-VDALVTMLSERIDAEVFDAAPRL--KIVANYAVGYDNIDIEEATKMGVYITNTPDVLTNATADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGRTIGIVGFGRIGQAIAR-RAKGFGMRILYNSRTRKPEVEKELGA--EFM--------------PLDELLKESDFV 208          
BLAST of FC868594 vs. ExPASy Swiss-Prot
Match: GYAR_PYRKO (Glyoxylate reductase OS=Pyrococcus kodakaraensis GN=gyaR PE=3 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 3.140e-17
Identity = 64/212 (30.19%), Postives = 103/212 (48.58%), Query Frame = 2
Query:   32 LIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKVVTAYGQFLKAHGEHPVTWKRASSMDEVLREADVI 655
            ++++   VE+  +++ I   E ++  + D  D ++  L+E     +F A  R   +  +N AVGY+N+DV  A + GI V NTP V                 RR++EAD F R+G +      W P  F+G  + G+TIG++G GRIG A AR    GF M ++YY   +    EK + A                   S++++LRE+D +
Sbjct:   18 MLKEHFEVEVWPEEREIPR-EVLLKKVRD-VDALVTMLSERIDSEVFDAAPRL--RIVANYAVGYDNIDVEEATRRGIYVTNTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIGIVGFGRIGQAVAR-RARGFGMRILYYSRSRKPEAEKELGA----------------EFRSLEDLLRESDFV 208          
BLAST of FC868594 vs. ExPASy Swiss-Prot
Match: GYAR_THEPD (Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR PE=3 SV=1)

HSP 1 Score: 87.4261 bits (215), Expect = 6.996e-17
Identity = 61/186 (32.80%), Postives = 95/186 (51.08%), Query Frame = 2
Query:    2 PMPGTRWISLLIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYDG-WLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKVV 556
            P PG      ++++ C V +   K    S E+++  I DK D ++  LT+     +  A      K  S  +VG++++D+  A K GI V +TPGV                 RRIVEAD+ +R G +D  W P    G  LKG+TIG++G GRIG A A+ +   F + ++YYD+ +   +E V+
Sbjct:   13 PEPGLS----MLKECCDVVVHESKDWPPSREELLRNIRDK-DALLCLLTDKIDAEVMDAAPNL--KVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTDAVAEFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKRL-SSFDVKILYYDIERRWDVETVI 190          
BLAST of FC868594 vs. ExPASy Swiss-Prot
Match: GYAR_AERPE (Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR PE=3 SV=2)

HSP 1 Score: 86.6557 bits (213), Expect = 1.193e-16
Identity = 53/154 (34.42%), Postives = 81/154 (52.60%), Query Frame = 2
Query:  206 SNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAG----LYDGWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKVVTAYGQFLKAHGEHPVTWKRASSMDEVLREADVI 655
            + MAVG++N+DV  A + GI V NTPGV                 RR+VEAD F+R G    L  GW P + +G  L+G+T+G++G GRIGS  A  + + F M +IY+   +   +EK + A                   S++++LRE+D++
Sbjct:   73 AQMAVGFDNIDVECATRLGIYVTNTPGVLTEATAEFTWALILAAARRVVEADHFVRWGEWWRLRTGWHPMMMLGVELRGKTLGILGMGRIGSRVAE-IGKAFGMRIIYHSRSRKREIEKELGA----------------EYRSLEDLLRESDIL 209          
BLAST of FC868594 vs. ExPASy Swiss-Prot
Match: GYAR_PYRHO (Glyoxylate reductase OS=Pyrococcus horikoshii GN=gyaR PE=1 SV=2)

HSP 1 Score: 85.5001 bits (210), Expect = 2.659e-16
Identity = 55/181 (30.39%), Postives = 91/181 (50.28%), Query Frame = 2
Query:   32 LIEQDCRVEICTQKKTILSVEDIIALIGDKCDGVIGQLTEDWGETLFAALSRAGGKAFSNMAVGYNNVDVNAANKYGIAVGNTPGVXXXXXXXXXXXXXXXXXRRIVEADEFMRAGLYD----GWLPNLFVGNLLKGQTIGVIGAGRIGSAYARMMVEGFKMNLIYYDLYQATRLEKVVTA 562
            ++E +  VE+   +K I    +I+     + D ++  L+E   + +F    +   +  +N AVGY+N+D+  A K GI V NTP V                 R +V+ D F+R+G +      W P  F+G  + G+TIG+IG GRIG A A+   +GF M ++YY   +   +E+ + A
Sbjct:   18 MLEDEFEVEVWGDEKEI--PREILLKKVKEVDALVTMLSERIDKEVFENAPKL--RIVANYAVGYDNIDIEEATKRGIYVTNTPDVLTDATADLAFALLLATARHVVKGDRFVRSGEWKKRGVAWHPKWFLGYDVYGKTIGIIGLGRIGQAIAK-RAKGFNMRILYYSRTRKEEVERELNA 193          
The following BLAST results are available for this feature:
BLAST of FC868594 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 26
Match NameE-valueIdentityDescription
DHGY_CUCSA1.984e-10485.32Glycerate dehydrogenase OS=Cucumis sativus GN=HPR-... [more]
GYAR_KORCO1.665e-1836.81Glyoxylate reductase OS=Korarchaeum cryptofilum (s... [more]
GYAR_THELI2.840e-1841.27Glyoxylate reductase OS=Thermococcus litoralis GN=... [more]
GYAR_PYRFU6.328e-1829.72Glyoxylate reductase OS=Pyrococcus furiosus GN=gya... [more]
GYAR_PYRAB8.264e-1830.66Glyoxylate reductase OS=Pyrococcus abyssi GN=gyaR ... [more]
GYAR_THEON2.405e-1730.19Glyoxylate reductase OS=Thermococcus onnurineus (s... [more]
GYAR_PYRKO3.140e-1730.19Glyoxylate reductase OS=Pyrococcus kodakaraensis G... [more]
GYAR_THEPD6.996e-1732.80Glyoxylate reductase OS=Thermofilum pendens (strai... [more]
GYAR_AERPE1.193e-1634.42Glyoxylate reductase OS=Aeropyrum pernix GN=gyaR P... [more]
GYAR_PYRHO2.659e-1630.39Glyoxylate reductase OS=Pyrococcus horikoshii GN=g... [more]

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Properties
Property NameValue
Genbank descriptionC31002D05EF AbioticL1 Citrus clementina cDNA clone C31002D05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868594 ID=FC868594; Name=FC868594; organism=Citrus clementina; type=EST; length=656bp
GCCTATGCCTGGAACCCGCTGGATCAGTCTCTTAATCGAACAAGATTGCC
GTGTTGAAATATGCACCCAGAAGAAAACTATACTCTCTGTTGAAGATATC
ATTGCTTTGATTGGTGACAAGTGCGATGGAGTCATTGGACAGTTGACAGA
GGACTGGGGAGAGACTTTGTTTGCTGCACTGAGTAGAGCAGGAGGAAAGG
CTTTTAGTAACATGGCTGTTGGTTACAACAATGTTGACGTTAATGCTGCT
AACAAATATGGTATTGCTGTTGGAAACACTCCTGGAGTACTTACAGAAAC
AACAGCAGAGTTAGCAGCTTCGCTCTCTCTAGCGGCTGCAAGAAGAATTG
TTGAAGCAGATGAGTTTATGAGAGCTGGCTTATACGATGGATGGCTTCCA
AATCTGTTCGTTGGGAACTTGCTCAAGGGACAGACTATTGGTGTGATTGG
AGCTGGTCGTATAGGATCTGCCTATGCTAGAATGATGGTTGAAGGGTTCA
AAATGAACCTCATTTACTATGATCTTTACCAAGCTACACGCTTGGAAAAG
GTTGTCACAGCTTATGGTCAGTTTCTAAAAGCCCATGGTGAACACCCTGT
CACTTGGAAAAGAGCCTCGTCCATGGATGAGGTGCTTCGAGAAGCAGATG
TGATAA
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