FC868631

Overview
NameFC868631
Unique NameFC868631
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868631 vs. ExPASy Swiss-Prot
Match: PHB1_DICDI (Prohibitin-1, mitochondrial OS=Dictyostelium discoideum GN=phbA PE=3 SV=1)

HSP 1 Score: 224.172 bits (570), Expect = 4.949e-58
Identity = 107/206 (51.94%), Postives = 151/206 (73.30%), Query Frame = 2
Query:   50 SFLTNIXXXXXXXXXXXTVLNSSLYTVDGGERAVLFDRFRGVIDETIGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLDDVAITHLSYGAEFSRXXXXXXXXXXXXXRSKFVVMKADXERRA 667
            SFL  +           ++  SS+YTVDGG+RAV+FDR  GV ++++GEGTHF++PWLQKP IFDIR+ P    S +G+KDLQ V++T+RVL RP+V  LP IF  LGL+YDE++LPS+GNEVLK+VVAQ++A +L+T+R  VS  +RESL+KRA++FN++LDDV+ITHLS+  +F+              RSK++VMK + E++A
Sbjct:    3 SFLNKLIPLALTVGTGLSLAQSSMYTVDGGQRAVIFDRISGVKEKSVGEGTHFIMPWLQKPIIFDIRSSPRNIKSDTGSKDLQTVSVTVRVLFRPDVEHLPSIFSKLGLDYDERILPSLGNEVLKSVVAQYDATELITQREVVSKEIRESLMKRAKEFNLLLDDVSITHLSFSQDFTNAIEHKQVAQQEAERSKYIVMKNEQEKKA 208          
BLAST of FC868631 vs. ExPASy Swiss-Prot
Match: PHB1_SCHPO (Prohibitin-1 OS=Schizosaccharomyces pombe GN=phb1 PE=2 SV=1)

HSP 1 Score: 218.394 bits (555), Expect = 2.716e-56
Identity = 104/189 (55.03%), Postives = 146/189 (77.25%), Query Frame = 2
Query:  101 TVLNSSLYTVDGGERAVLFDRFRGVIDETIGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLDDVAITHLSYGAEFSRXXXXXXXXXXXXXRSKFVVMKADXERRA 667
            T+L SS+Y V GG+RAVLFDR  GV  + + EGTHFLIPWLQK  ++D+RTRP   ++ +G+KDLQMV+LTLRVL RPEV  LP I+Q+LGL+YDE+VLPSIGNE+LK+VVAQF+A +L+T+R  VSA +R+ L++RA +F I L+DV+ITH+++G EF++             R++F+V +++ ER+A
Sbjct:   20 TLLQSSIYDVPGGKRAVLFDRLSGVQKQVVQEGTHFLIPWLQKAIVYDVRTRPRNIATTTGSKDLQMVSLTLRVLHRPEVGMLPQIYQNLGLDYDERVLPSIGNEILKSVVAQFDAAELITQREVVSAKIRQELVQRATEFGIRLEDVSITHMTFGKEFTKAVERKQIAQQEAERARFLVEQSEQERQA 208          
BLAST of FC868631 vs. ExPASy Swiss-Prot
Match: PHB1_YEAST (Prohibitin-1 OS=Saccharomyces cerevisiae GN=PHB1 PE=1 SV=2)

HSP 1 Score: 212.616 bits (540), Expect = 1.490e-54
Identity = 101/185 (54.59%), Postives = 141/185 (76.22%), Query Frame = 2
Query:  116 SLYTVDGGERAVLFDRFRGVIDETIGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLDDVAITHLSYGAEFSRXXXXXXXXXXXXXRSKFVVMKADXERRAA 670
            S+Y V GG R V+FDR  GV  + +GEGTHFL+PWLQK  I+D+RT+P + ++ +GTKDLQMV+LTLRVL RPEV +LP I+Q+LGL+YDE+VLPSIGNEVLK++VAQF+A +L+T+R  +S  +R+ L  RA +F I L+DV+ITH+++G EF++             R+KF+V KA+ ER+A+
Sbjct:   28 SMYDVKGGSRGVIFDRINGVKQQVVGEGTHFLVPWLQKAIIYDVRTKPKSIATNTGTKDLQMVSLTLRVLHRPEVLQLPAIYQNLGLDYDERVLPSIGNEVLKSIVAQFDAAELITQREIISQKIRKELSTRANEFGIKLEDVSITHMTFGPEFTKAVEQKQIAQQDAERAKFLVEKAEQERQAS 212          
BLAST of FC868631 vs. ExPASy Swiss-Prot
Match: PHB_CHICK (Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 1.648e-53
Identity = 100/189 (52.91%), Postives = 138/189 (73.02%), Query Frame = 2
Query:  104 VLNSSLYTVDGGERAVLFDRFRGVIDETIGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLDDVAITHLSYGAEFSRXXXXXXXXXXXXXRSKFVVMKADXERRAA 670
            V+NS+LY VD G RAV+FDRFRGV D  +GEGTHFLIPW+QKP IFD R+RP     ++G+KDLQ VN+TLR+L RP  ++LP IF  +G +YDE+VLPSI  E+LK+VVA+F+A +L+T+R  VS  V E L +RA  F ++LDDV++THL++G EF+              R++F+V KA+ +++AA
Sbjct:   22 VVNSALYNVDAGHRAVIFDRFRGVQDTVVGEGTHFLIPWVQKPIIFDCRSRPRNIPVITGSKDLQNVNITLRILFRPVTAQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSEDLTERAATFGLILDDVSLTHLTFGKEFTEAVEMKQVAQQEAERARFIVEKAEQQKKAA 210          
BLAST of FC868631 vs. ExPASy Swiss-Prot
Match: PHB_HUMAN (Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.810e-53
Identity = 101/189 (53.44%), Postives = 138/189 (73.02%), Query Frame = 2
Query:  104 VLNSSLYTVDGGERAVLFDRFRGVIDETIGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLDDVAITHLSYGAEFSRXXXXXXXXXXXXXRSKFVVMKADXERRAA 670
            V+NS+LY VD G RAV+FDRFRGV D  +GEGTHFLIPW+QKP IFD R+RP     ++G+KDLQ VN+TLR+L RP  S+LP IF  +G +YDE+VLPSI  E+LK+VVA+F+A +L+T+R  VS  V + L +RA  F ++LDDV++THL++G EF+              R++FVV KA+ +++AA
Sbjct:   22 VVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210          
BLAST of FC868631 vs. ExPASy Swiss-Prot
Match: PHB_BOVIN (Prohibitin OS=Bos taurus GN=PHB PE=2 SV=1)

HSP 1 Score: 208.379 bits (529), Expect = 2.810e-53
Identity = 101/189 (53.44%), Postives = 138/189 (73.02%), Query Frame = 2
Query:  104 VLNSSLYTVDGGERAVLFDRFRGVIDETIGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLDDVAITHLSYGAEFSRXXXXXXXXXXXXXRSKFVVMKADXERRAA 670
            V+NS+LY VD G RAV+FDRFRGV D  +GEGTHFLIPW+QKP IFD R+RP     ++G+KDLQ VN+TLR+L RP  S+LP IF  +G +YDE+VLPSI  E+LK+VVA+F+A +L+T+R  VS  V + L +RA  F ++LDDV++THL++G EF+              R++FVV KA+ +++AA
Sbjct:   22 VVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIFTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210          
BLAST of FC868631 vs. ExPASy Swiss-Prot
Match: PHB_RAT (Prohibitin OS=Rattus norvegicus GN=Phb PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.261e-53
Identity = 100/189 (52.91%), Postives = 138/189 (73.02%), Query Frame = 2
Query:  104 VLNSSLYTVDGGERAVLFDRFRGVIDETIGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLDDVAITHLSYGAEFSRXXXXXXXXXXXXXRSKFVVMKADXERRAA 670
            V+NS+LY VD G RAV+FDRFRGV D  +GEGTHFLIPW+QKP IFD R+RP     ++G+KDLQ VN+TLR+L RP  S+LP I+  +G +YDE+VLPSI  E+LK+VVA+F+A +L+T+R  VS  V + L +RA  F ++LDDV++THL++G EF+              R++FVV KA+ +++AA
Sbjct:   22 VVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIYTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210          
BLAST of FC868631 vs. ExPASy Swiss-Prot
Match: PHB_MOUSE (Prohibitin OS=Mus musculus GN=Phb PE=1 SV=1)

HSP 1 Score: 207.223 bits (526), Expect = 6.261e-53
Identity = 100/189 (52.91%), Postives = 138/189 (73.02%), Query Frame = 2
Query:  104 VLNSSLYTVDGGERAVLFDRFRGVIDETIGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLDDVAITHLSYGAEFSRXXXXXXXXXXXXXRSKFVVMKADXERRAA 670
            V+NS+LY VD G RAV+FDRFRGV D  +GEGTHFLIPW+QKP IFD R+RP     ++G+KDLQ VN+TLR+L RP  S+LP I+  +G +YDE+VLPSI  E+LK+VVA+F+A +L+T+R  VS  V + L +RA  F ++LDDV++THL++G EF+              R++FVV KA+ +++AA
Sbjct:   22 VVNSALYNVDAGHRAVIFDRFRGVQDIVVGEGTHFLIPWVQKPIIFDCRSRPRNVPVITGSKDLQNVNITLRILFRPVASQLPRIYTSIGEDYDERVLPSITTEILKSVVARFDAGELITQRELVSRQVSDDLTERAATFGLILDDVSLTHLTFGKEFTEAVEAKQVAQQEAERARFVVEKAEQQKKAA 210          
BLAST of FC868631 vs. ExPASy Swiss-Prot
Match: PHB2_YEAST (Prohibitin-2 OS=Saccharomyces cerevisiae GN=PHB2 PE=1 SV=2)

HSP 1 Score: 204.912 bits (520), Expect = 3.107e-52
Identity = 98/186 (52.69%), Postives = 135/186 (72.58%), Query Frame = 2
Query:  107 LNSSLYTVDGGERAVLFDRFRGVIDETIGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLDDVAITHLSYGAEFSRXXXXXXXXXXXXXRSKFVVMKADXERR 664
            +N++L+ VDGG RA+++ R  GV      EGTHF+ PWL  P I+D+R +P   +S++GTKDLQMVN+T RVLSRP+V +LP I++ LG +YDE+VLPSI NEVLKAVVAQFNA QL+T+R  VS L+RE+L++RA  FNI+LDDV+IT++++  EF+              R+ FVV KA  E++
Sbjct:   54 INNALFNVDGGHRAIVYSRIHGVSSRIFNEGTHFIFPWLDTPIIYDVRAKPRNVASLTGTKDLQMVNITCRVLSRPDVVQLPTIYRTLGQDYDERVLPSIVNEVLKAVVAQFNASQLITQREKVSRLIRENLVRRASKFNILLDDVSITYMTFSPEFTNAVEAKQIAQQDAQRAAFVVDKARQEKQ 239          
BLAST of FC868631 vs. ExPASy Swiss-Prot
Match: PHB2_DICDI (Prohibitin-2 OS=Dictyostelium discoideum GN=phbB PE=3 SV=1)

HSP 1 Score: 202.216 bits (513), Expect = 2.014e-51
Identity = 94/185 (50.81%), Postives = 141/185 (76.22%), Query Frame = 2
Query:  113 SSLYTVDGGERAVLFDRFRGVIDETIGEGTHFLIPWLQKPFIFDIRTRPHTFSSVSGTKDLQMVNLTLRVLSRPEVSRLPYIFQHLGLEYDEKVLPSIGNEVLKAVVAQFNADQLLTERPHVSALVRESLIKRARDFNIVLDDVAITHLSYGAEFSRXXXXXXXXXXXXXRSKFVVMKADXERRA 667
            SSL  V+GG RA++F+RF G+ ++   EGTHF++PW ++  I+D+R +P + SS++G+KDLQMVN+T+RVLS+P+VS+LP I++ LG +YDE+VLPSI NE+LK++VAQFNA QL+T+R  VS L+ + L+ RA+DFNI LDDV+ITHL++G E++              R++F+V KA  ++R+
Sbjct:   39 SSLVNVEGGHRAIVFNRFVGIKNKVYNEGTHFIVPWFERAEIYDVRAKPRSISSLTGSKDLQMVNITIRVLSKPKVSQLPAIYRTLGKDYDERVLPSIVNEILKSIVAQFNASQLITQREQVSRLIFKRLVDRAKDFNIELDDVSITHLNFGREYAAAIEAKQVAQQEAERARFLVEKALQDKRS 223          
The following BLAST results are available for this feature:
BLAST of FC868631 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 21
Match NameE-valueIdentityDescription
PHB1_DICDI4.949e-5851.94Prohibitin-1, mitochondrial OS=Dictyostelium disco... [more]
PHB1_SCHPO2.716e-5655.03Prohibitin-1 OS=Schizosaccharomyces pombe GN=phb1 ... [more]
PHB1_YEAST1.490e-5454.59Prohibitin-1 OS=Saccharomyces cerevisiae GN=PHB1 P... [more]
PHB_CHICK1.648e-5352.91Prohibitin OS=Gallus gallus GN=PHB PE=1 SV=1[more]
PHB_HUMAN2.810e-5353.44Prohibitin OS=Homo sapiens GN=PHB PE=1 SV=1[more]
PHB_BOVIN2.810e-5353.44Prohibitin OS=Bos taurus GN=PHB PE=2 SV=1[more]
PHB_RAT6.261e-5352.91Prohibitin OS=Rattus norvegicus GN=Phb PE=1 SV=1[more]
PHB_MOUSE6.261e-5352.91Prohibitin OS=Mus musculus GN=Phb PE=1 SV=1[more]
PHB2_YEAST3.107e-5252.69Prohibitin-2 OS=Saccharomyces cerevisiae GN=PHB2 P... [more]
PHB2_DICDI2.014e-5150.81Prohibitin-2 OS=Dictyostelium discoideum GN=phbB P... [more]

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Properties
Property NameValue
Genbank descriptionC31002H03EF AbioticL1 Citrus clementina cDNA clone C31002H03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868631 ID=FC868631; Name=FC868631; organism=Citrus clementina; type=EST; length=671bp
AGTTCCTTTTCTCTCTGACACCAAAATGGGCAGCAGTCAAGCCGCAGTTT
CATTCTTAACCAACATAGCTCGTGCGGCCTTCGGGCTCGGCGCCGCCGCC
ACCGTGCTAAACTCCTCGCTTTACACTGTAGACGGAGGAGAGCGAGCTGT
TCTCTTTGACAGGTTCCGTGGTGTGATCGATGAAACCATCGGTGAAGGGA
CCCACTTCCTCATCCCCTGGCTCCAGAAGCCCTTTATCTTCGACATCCGT
ACCCGGCCCCACACCTTCTCTTCCGTTTCAGGGACCAAAGATCTTCAGAT
GGTTAACCTAACACTCCGTGTGCTTTCTCGCCCTGAGGTATCACGGCTGC
CTTACATTTTCCAACATCTTGGACTCGAGTATGATGAGAAGGTGCTTCCA
TCGATTGGGAATGAGGTGCTGAAGGCCGTGGTAGCACAATTTAATGCTGA
TCAGCTTCTTACCGAGCGTCCACATGTTTCTGCACTAGTCCGAGAGTCTC
TGATCAAACGTGCTAGGGACTTCAACATTGTGTTGGACGATGTGGCCATC
ACGCATTTGTCATATGGAGCAGAGTTTTCTAGGGCAGTCGAGCAAAAGCA
AGTGGCACAGCAGGAGGCTGAAAGGTCTAAGTTTGTGGTGATGAAGGCCG
ATCANGAAAGGAGGGCTGCAA
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