FC868698
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868698 vs. ExPASy Swiss-Prot
Match: TAF5_SCHPO (Transcription initiation factor TFIID subunit 5 OS=Schizosaccharomyces pombe GN=taf5 PE=1 SV=1) HSP 1 Score: 107.071 bits (266), Expect = 9.619e-23 Identity = 59/198 (29.80%), Postives = 104/198 (52.53%), Query Frame = 1 Query: 112 VATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSXK---MLGIINERINFQVSPGQPSSISD 696 V YL KKG+S E L+ E + S I E+ P Y Y+ LR W SSL+LYK EL +L+P+F+H +++L+++ H + A+ F+ F++DH +H D++ L+ + PSH+ E A R +K + + +++LLL +L + S ++ +IN+ I+ + PG+P+ + + Sbjct: 16 VLDYLAKKGYSRTEAMLRLEASGSGVSVEEKLKSI----------------EETPDAYTHTYTILRDWVDSSLELYKAELHRILFPIFVHSYLNLLSQDHYEAAKQFYELFKDDHTDLHDFDVKNLKSLSLPSHVAEDRTAQQYRQNKYQLHFSRITFDLLLHFLFENVSNGGSIIIKLINQHIDIHIVPGRPTVLEN 197
BLAST of FC868698 vs. ExPASy Swiss-Prot
Match: TAF5_ENCCU (Transcription initiation factor TFIID subunit 5 OS=Encephalitozoon cuniculi GN=TAF5 PE=1 SV=1) HSP 1 Score: 95.5153 bits (236), Expect = 2.896e-19 Identity = 42/133 (31.58%), Postives = 82/133 (61.65%), Query Frame = 1 Query: 286 QDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSXKMLGIINERINFQVSPGQPS 684 + Y L++W SLDL+K++LL +LYP+FIH + DL+ + EA+ FF +R DH ++++ E + + H+ E FA++ ++SK ++ + +Y+++LL+ +L + +L I+N+ ++ +V G S Sbjct: 20 ETSYVSLKTWIEDSLDLFKNDLLPLLYPLFIHIYFDLIQQNKTDEAKEFFEKYRGDH-YNKSEEIKQFESIYTVQHIHENNFAYTFKNSKYHLSMGRYAFDLLINFLEERNLTYILKILNQHLDIKVYVGPKS 151
BLAST of FC868698 vs. ExPASy Swiss-Prot
Match: TAF73_SCHPO (Transcription initiation factor TFIID subunit taf73 OS=Schizosaccharomyces pombe GN=taf73 PE=1 SV=1) HSP 1 Score: 94.7449 bits (234), Expect = 4.940e-19 Identity = 64/200 (32.00%), Postives = 104/200 (52.00%), Query Frame = 1 Query: 106 EFVATYLKKKGFSEAENALQAEIQRNKSSNNTNPIDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQ---SXKMLGIINERINFQVSPGQPSSISD 696 + V YL KKG+S E L+ EI SS P E + SE+ Y Y LR W +LDLYK +L VLYP+F+H ++DL+ K + A FF +FR +HE++H D++ L + S +EE+E A R +K I + +++LL+Q+L + + S ++ ++N+ I+ +++ Q D Sbjct: 17 KIVLDYLFKKGYSRTEAMLRLEI----SSVGAIP------EEQQDWHIGASET------YVQVYILLRDWIDGTLDLYKPKLQKVLYPIFVHSYLDLLQKNDPEMAIYFFESFRIEHEVLHGYDIRALAQLKIASDVEEIEIAQLYRKNKYRINFTRSTFDLLVQFLFENEVNGSGIIIRLLNQYIDIKITMPQVEGKED 200
BLAST of FC868698 vs. ExPASy Swiss-Prot
Match: TAF5_HUMAN (Transcription initiation factor TFIID subunit 5 OS=Homo sapiens GN=TAF5 PE=1 SV=3) HSP 1 Score: 93.9745 bits (232), Expect = 8.427e-19 Identity = 47/160 (29.38%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 208 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSXKMLGIINERINFQVSPGQPSS 687 + + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +++LV H EA++FF F D E + DL+ L + H++ E R SK ++I + SY+LL ++L + Q+ ++ I+ E + + G P S Sbjct: 190 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRS 348
BLAST of FC868698 vs. ExPASy Swiss-Prot
Match: TAF5_MOUSE (Transcription initiation factor TFIID subunit 5 OS=Mus musculus GN=Taf5 PE=2 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 1.101e-18 Identity = 47/160 (29.38%), Postives = 87/160 (54.37%), Query Frame = 1 Query: 208 IDILNDPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSXKMLGIINERINFQVSPGQPSS 687 + + + P++S +++ D P Y++ YS L+ + SLD ++ EL + YP+F+H +++LV H EA++FF F D E + DL+ L + H++ E R SK ++I + SY+LL ++L + Q+ ++ I+ E + + G P S Sbjct: 191 VAVEDQPDVSAVLSAYNQQGD-PTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDLRVLSSLTKKEHMKGNETMLDFRTSKFVLRIYRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDGMPRS 349
BLAST of FC868698 vs. ExPASy Swiss-Prot
Match: TAF5_YEAST (Transcription initiation factor TFIID subunit 5 OS=Saccharomyces cerevisiae GN=TAF5 PE=1 SV=1) HSP 1 Score: 89.3521 bits (220), Expect = 2.076e-17 Identity = 62/216 (28.70%), Postives = 104/216 (48.15%), Query Frame = 1 Query: 112 VATYLKKKGFSEAENALQAEIQRNKSSNN-----------------------------TNPIDILN--DPELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQS---XKMLGIINERIN 657 V YL KKG+ E L+AE R + N +NP ++ + D E E + P Y YS L++W SSL++YK EL +++YP+FI+ F++LVAK + AR FF+ F D + H ++ +L V S H++E E A + + K I + + + LLL +L++ +S ++ +IN+ ++ Sbjct: 64 VLEYLNKKGYHRTEAMLRAESGRTLTPQNKQSPANTKTGKFPEQSSIPPNPGKTAKPISNPTNLSSKRDAEGGIVSSGRLEGLNAPENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKNPVY-ARRFFDRFSPDFKDFHGSEINRLFSVNSIDHIKENEVASAFQSHKYRITMSKTTLNLLLYFLNENESIGGSLIISVINQHLD 278
BLAST of FC868698 vs. ExPASy Swiss-Prot
Match: TAF5_DROME (Transcription initiation factor TFIID subunit 5 OS=Drosophila melanogaster GN=Taf5 PE=1 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.791e-11 Identity = 37/149 (24.83%), Postives = 75/149 (50.34%), Query Frame = 1 Query: 229 ELSKFFRTFSESEDGPARYQDEYSKLRSWTYSSLDLYKHELLHVLYPVFIHCFMDLVAKGHIQEARTFFNNFREDHEMMHLRDLQKLEGVLSPSHLEEMEFAHSLRHSKVNIKICQYSYELLLQYLHKTQSXKMLGIINERINFQVSPG 675 EL+KF + Y+ Y +LR++ SLD+YKHEL VLYP+ + + ++A G ++A+ F ++ D + ++ L L + P L E + ++ K I++ + S+ L +++ + + I+++ ++F G Sbjct: 101 ELAKFI---DDDSFDAQHYEQAYKELRTFVEDSLDIYKHELSMVLYPILVQIYFKILASGLREKAKEFIEKYKCDLDGYYIEGLFNLLLLSKPEELLENDLVVAMEQDKFVIRMSRDSHSLFKRHIQDRRQEVVADIVSKYLHFDTYEG 246 The following BLAST results are available for this feature:
BLAST of FC868698 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC868698 ID=FC868698; Name=FC868698; organism=Citrus clementina; type=EST; length=700bpback to top |