FC868726
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_SYNP2 (Tryptophan synthase alpha chain OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=trpA PE=3 SV=1) HSP 1 Score: 223.402 bits (568), Expect = 1.001e-57 Identity = 105/189 (55.56%), Postives = 145/189 (76.72%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 ++E F LK+ G+ ALIP+ITAGDPDL TT +ALK+LD+ G+D IELGVPYSDPLADGP IQAAATR+L+RG +L++++ V Q++ PI LFTYYNPI RG+D FM+ V G++GLV+PD+PLEE++ + A + ++L+L PT+PT+R++AI +AS+GF+YL S GVTGAR S++ V Sbjct: 4 VSERFRSLKQAGQCALIPFITAGDPDLETTEQALKILDAAGADFIELGVPYSDPLADGPTIQAAATRALSRGVTLEQVLAIVQRVHGQLTAPIILFTYYNPIFYRGIDAFMAQVAAAGVKGLVIPDLPLEESQMVLDAATSHGLDLILLVAPTSPTERIEAIAKASQGFIYLVSVTGVTGARTSVASRV 192
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_ANAVT (Tryptophan synthase alpha chain OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=trpA PE=3 SV=1) HSP 1 Score: 222.631 bits (566), Expect = 1.708e-57 Identity = 108/189 (57.14%), Postives = 138/189 (73.02%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 +++ F LK+ + ALIP+ITAGDPDL TTA ALK+LDS G+DIIELG+PYSDPLADGPVIQAAATR+L GT ++L MLK P + PI LFTYYN IL RG+DNF+ V G+ GLVVPD+PLEE L K A + I+L+L PT+ ++R++AI +S+GF+YL S GVTG R+ + G V Sbjct: 4 ISDRFETLKQNQECALIPFITAGDPDLETTAAALKILDSNGADIIELGIPYSDPLADGPVIQAAATRALQNGTKLESVLEMLKVTTPSLQAPIVLFTYYNSILHRGIDNFLEQVAAAGVAGLVVPDLPLEEAAGLLKPATERGIDLILLIAPTSSSERIEAIARSSQGFIYLVSVTGVTGMRSQVEGRV 192
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_CYAP8 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 8801) GN=trpA PE=3 SV=1) HSP 1 Score: 219.55 bits (558), Expect = 1.446e-56 Identity = 107/190 (56.32%), Postives = 142/190 (74.74%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 +++ F L+ + + ALIP+ITAGDPDL TTA+AL+LLD+ G+D+IELGVPYSDPLADGPVIQAAATR+L RG +L ++KEV P+I PI LFTYYNPI RGV+ F+ V+ G++GLVVPD+PLEE ESL K A + I + L PT+P +R++AI S+GF+YL S GVTG R+ ++ V+ Sbjct: 4 VSDCFQSLRDRRQCALIPFITAGDPDLETTAKALRLLDASGADLIELGVPYSDPLADGPVIQAAATRALGRGVKLEDVLGVVKEVSPEIKAPIILFTYYNPIFYRGVEAFLQQVKAAGVQGLVVPDLPLEEAESLLKPAHEVGIAVTLLVAPTSPIERIEAIARQSQGFIYLVSVTGVTGMRSQVTSRVK 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_MAIZE (Indole-3-glycerol phosphate lyase, chloroplastic OS=Zea mays GN=BX1 PE=1 SV=2) HSP 1 Score: 219.164 bits (557), Expect = 1.888e-56 Identity = 105/190 (55.26%), Postives = 138/190 (72.63%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 +++T L +GK A IPYITAGDPDL+TTAEAL+LLD CG+D+IELGVP SDP DGP+IQA+ R+LA GT +A+L ML+EV P++SCP+ L +YY PI+ R ++ +++ G+ GL+VPD+P SL EA N +ELVL TTP P DRMK I +ASEGFVYL S GVTG RA+++ V+ Sbjct: 90 VSDTMAALMAKGKTAFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPELSCPVVLLSYYKPIMSRS----LAEMKEAGVHGLIVPDLPYVAAHSLWSEAKNNNLELVLLTTPAIPEDRMKEITKASEGFVYLVSVNGVTGPRANVNPRVE 275
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_ACAM1 (Tryptophan synthase alpha chain OS=Acaryochloris marina (strain MBIC 11017) GN=trpA PE=3 SV=1) HSP 1 Score: 216.853 bits (551), Expect = 9.371e-56 Identity = 104/190 (54.74%), Postives = 141/190 (74.21%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 +++ F +L+ +G+ ALIP++TAGDPDL+TTA AL+ LD+ G+D+IELGVPYSDPLADGPVIQAAATR+L RGT + +L M+ E+ P+I PI LFTYYNPI RGV F+ + G+RGLVVPD+PLEE+E+L ++A IE+ L PT+ +R++ I S+GF+YL S+ GVTG R + VQ Sbjct: 4 VSDCFAQLRDRGQCALIPFLTAGDPDLATTASALRQLDASGADLIELGVPYSDPLADGPVIQAAATRALQRGTRLDQVLEMVTELSPEIRAPIILFTYYNPIYHRGVAEFLQQIAKAGVRGLVVPDLPLEESENLLQQAADLGIEVTLLVAPTSSKERIEKIALRSQGFIYLVSTTGVTGMRTKVENRVQ 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_TRIEI (Tryptophan synthase alpha chain OS=Trichodesmium erythraeum (strain IMS101) GN=trpA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.224e-55 Identity = 108/193 (55.96%), Postives = 142/193 (73.58%), Query Frame = 2 Query: 155 VGLAETFTRLKKQG-KVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 + +++ F L+ + ALIP+ITAGDPDL TTA+AL++LD G+++IELGVPYSDPLADGPVIQAAATRSL RGT ++L +++ V P++ PI LFTYYNPIL RGV+NF+ + D+G RGLVVPD+PLEE + L + A IEL L PT+P +R+KAI S+GF+YL S GVTG RA + V+ Sbjct: 2 ISVSDCFESLRNNSSQCALIPFITAGDPDLETTAKALEVLDRSGANMIELGVPYSDPLADGPVIQAAATRSLNRGTTLESVLEVVQTVSPKLRSPIILFTYYNPILYRGVENFLKKIYDVGARGLVVPDLPLEEADILLEPAKDIGIELTLLVAPTSPKERIKAIAHQSQGFIYLVSVTGVTGMRAQMQTRVE 194
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_MICAN (Tryptophan synthase alpha chain OS=Microcystis aeruginosa (strain NIES-843) GN=trpA PE=3 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.224e-55 Identity = 104/190 (54.74%), Postives = 137/190 (72.11%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 + E F L+ QG ALIP+ITAGDPDLSTTA+AL++LD G+D+IELGVPYSDPLADGPVIQ+AATR+L RG +L ++K ++ PI LFTYYNPI RG+D F+ ++ G+ GLVVPD+PLEE ESL + A IE++L PT+P +R++AI S+GF+YL S GVTG R ++ V+ Sbjct: 4 VTECFRSLRSQGNCALIPFITAGDPDLSTTAQALRILDRAGADLIELGVPYSDPLADGPVIQSAATRALNRGVKLEDVLEIVKNAQGEVKAPIILFTYYNPIYHRGIDVFLDQIKAAGVSGLVVPDLPLEEAESLLQPAAAKGIEVILLVAPTSPPERIQAIALQSQGFIYLVSVTGVTGMRKQVATRVE 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_CYAP4 (Tryptophan synthase alpha chain OS=Cyanothece sp. (strain PCC 7425 / ATCC 29141) GN=trpA PE=3 SV=1) HSP 1 Score: 214.542 bits (545), Expect = 4.651e-55 Identity = 103/191 (53.93%), Postives = 137/191 (71.73%), Query Frame = 2 Query: 155 VGLAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHV 727 V ++ F+ L+ + + ALIP+ITAGDP L TA+AL++LD G+D+IELGVPYSDPLADGP IQAAATR+L +GT +A+L M+ V P + P+ LFTYYNPI RGV+ F+ V G++GLVVPD+PLEE +++ +A IEL L PTTP R+ AI E S+GF+YL S+ GVTG R+ + G V Sbjct: 2 VSVSTCFSALRDRAQCALIPFITAGDPSLEITAKALQVLDQQGADLIELGVPYSDPLADGPTIQAAATRALQKGTRLDAVLEMISHVAPNLRSPLILFTYYNPIFHRGVEPFLQQVAQAGVQGLVVPDLPLEEADTVLTQAAAVGIELTLLVAPTTPRSRIAAIAERSQGFIYLVSTTGVTGMRSKVEGRV 192
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_SYNY3 (Tryptophan synthase alpha chain OS=Synechocystis sp. (strain PCC 6803) GN=trpA PE=3 SV=1) HSP 1 Score: 212.231 bits (539), Expect = 2.308e-54 Identity = 100/190 (52.63%), Postives = 141/190 (74.21%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 +A F L+++G+ ALIP++TAGDPDL+TTAEAL++LD G+D+IELGVPYSDPLADGPVIQAAATR+L +G + +L++++EV I+ PI LFTYYNPI +GV+ F+ ++ G++GLVVPD+PLEE++ L + + +EL+L PT+ +R AI + S+GFVYL S GVTG R + V+ Sbjct: 4 VAACFNALRQRGECALIPFLTAGDPDLATTAEALRILDRAGADLIELGVPYSDPLADGPVIQAAATRALQKGVKLDDVLAIVREVHQDIAAPIILFTYYNPIFYQGVEVFLDKIKAAGVKGLVVPDLPLEESDRLLEATAERGLELILLVAPTSSPERQTAIAKKSQGFVYLVSVTGVTGVRTEVGSRVE 193
BLAST of FC868726 vs. ExPASy Swiss-Prot
Match: TRPA_THEEB (Tryptophan synthase alpha chain OS=Thermosynechococcus elongatus (strain BP-1) GN=trpA PE=3 SV=1) HSP 1 Score: 211.46 bits (537), Expect = 3.937e-54 Identity = 102/190 (53.68%), Postives = 135/190 (71.05%), Query Frame = 2 Query: 161 LAETFTRLKKQGKVALIPYITAGDPDLSTTAEALKLLDSCGSDIIELGVPYSDPLADGPVIQAAATRSLARGTNFNAILSMLKEVVPQISCPIALFTYYNPILKRGVDNFMSTVRDIGIRGLVVPDVPLEETESLQKEAMKNKIELVLFTTPTTPTDRMKAIVEASEGFVYLCSSIGVTGARASISGHVQ 730 ++E F + + + ALIP++TAGDPDL TT ALK+LD G+D+IELG+PYSDPLADGPVIQAAATR+L RGT A+L M ++ Q++ P+ LF+YYNPI RGV +F+ V GI+GLV+PD+PLEE E + E +EL L PTT +RM+AI AS+GF+YL S+ GVTG R ++ VQ Sbjct: 6 ISERFEHCRARQRCALIPFLTAGDPDLETTVAALKILDDHGADLIELGMPYSDPLADGPVIQAAATRALQRGTRLEAVLEMTTDLHQQLTAPLILFSYYNPIYHRGVSSFLKAVAQAGIKGLVIPDLPLEEAEPVLAETANLGLELTLLIAPTTSPERMRAIATASQGFIYLVSTTGVTGMRQEMASRVQ 195 The following BLAST results are available for this feature:
BLAST of FC868726 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868726 ID=FC868726; Name=FC868726; organism=Citrus clementina; type=EST; length=736bpback to top |