FC868730

Overview
NameFC868730
Unique NameFC868730
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length722
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: NADO1_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 1 OS=Oryza sativa subsp. japonica GN=Os10g0113000 PE=1 SV=1)

HSP 1 Score: 225.713 bits (574), Expect = 3.248e-59
Identity = 111/207 (53.62%), Postives = 151/207 (72.95%), Query Frame = 2
Query:   35 MVSIPEAPLGSTGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGT-GFPYNKEDIEP-LDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLLATAKIPPAVNQVELNPVWQQKKLRDFCEKK 649
            M +IPE P     +T+P VG GTA FPF  ++E    +++ AIE+GYRHFDTA IY +E  +GEA+A+A+R GLI SR ++F+TSK+W    H   V+PA + +L+NLG++Y+DL L+H+PVSL PG   FP+ KE I P  D EGVW  MEEC  LGL ++IGVSNF+ KKLE+LL+ A + PAVNQVE+NP+WQQ+ LR+ C ++
Sbjct:    1 MATIPEVPASELIQTMPRVGMGTAAFPF-TSSEDTTAAMLRAIELGYRHFDTARIYATEGCVGEAVAEAVRRGLIASRADVFVTSKIWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPVSLTPGNYDFPFPKEVILPSFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSLAAVRPAVNQVEVNPMWQQRTLREVCRRE 206          

HSP 2 Score: 24.6386 bits (52), Expect = 3.248e-59
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  646 EGIHITAYSPLGAK 687
            EG+ +  YSPLGAK
Sbjct:  206 EGVQLCGYSPLGAK 219          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: 6DCS_SOYBN (NAD(P)H-dependent 6'-deoxychalcone synthase OS=Glycine max PE=1 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.323e-58
Identity = 113/203 (55.67%), Postives = 148/203 (72.91%), Query Frame = 2
Query:   56 PLGSTGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGT-GFPYNKEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLLATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            P  S  + +P+VG G+A  P     +  KE+++ A++ GYRHFDTAA Y SE+ LGEA+ +A+ LGL+ SR +LF+TSKLW    H  LVLPAL+ SLK L LEY+DLYLIH+P+S +PG   FP   ED+ P D +GVWE+MEECQ LGLTK+IGVSNF+ KKL+ LL+ A I P V+QVE+N  WQQKKLR+FC++   I+
Sbjct:   13 PNSSAQQRMPVVGMGSA--PDFTCKKDTKEAIIEAVKQGYRHFDTAAAYGSEQALGEALKEAIHLGLV-SRQDLFVTSKLWVTENHPHLVLPALRKSLKTLQLEYLDLYLIHWPLSSQPGKFSFPIEVEDLLPFDVKGVWESMEECQKLGLTKAIGVSNFSVKKLQNLLSVATIRPVVDQVEMNLAWQQKKLREFCKENGIIV 212          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: NADO2_ORYSJ (Probable NAD(P)H-dependent oxidoreductase 2 OS=Oryza sativa subsp. japonica GN=Os10g0113100 PE=2 SV=1)

HSP 1 Score: 218.779 bits (556), Expect = 3.848e-57
Identity = 103/207 (49.76%), Postives = 150/207 (72.46%), Query Frame = 2
Query:   35 MVSIPEAPLGSTGKTIPLVGFGTAQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGT-GFPYNKEDIEP-LDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLLATAKIPPAVNQVELNPVWQQKKLRDFCEKK 649
            M +IPE P  +   T+P +G GTA FPF  ++E    +++ AIE+GYRHFDTA +Y +E  + EA+A+A+R GL+ SR ++F+TSKLW    H   V+PA + +L+NLG++Y+DL L+H+P ++ PG+  FP+ KE++ P  D EGVW  MEEC  LGL ++IGVSNF+ KKLE+LL+ A + PA NQVE+NP+WQQ+ LR+ C ++
Sbjct:    3 MATIPEVPASALLPTMPRIGMGTAAFPF-TSSEETTAALLRAIELGYRHFDTARLYATEGCVSEAVAEAVRRGLVASRADVFVTSKLWCSDLHAGRVVPAARETLRNLGMDYVDLLLVHWPATVAPGSYDFPFPKEEMAPAFDMEGVWRGMEECHRLGLARAIGVSNFSAKKLEQLLSFAVVRPAANQVEMNPMWQQRTLREVCRRE 208          

HSP 2 Score: 24.6386 bits (52), Expect = 3.848e-57
Identity = 9/14 (64.29%), Postives = 11/14 (78.57%), Query Frame = 1
Query:  646 EGIHITAYSPLGAK 687
            EG+ +  YSPLGAK
Sbjct:  208 EGVQLCGYSPLGAK 221          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: DDBX_BOVIN (Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 168.703 bits (426), Expect = 2.815e-41
Identity = 97/206 (47.09%), Postives = 131/206 (63.59%), Query Frame = 2
Query:   71 GKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPG-TGFPYN---KEDIEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G  IP++GFGT    + P   A E  K     AIE G+RH D+A +YQ+EE +G+AI   +  G +K R+++F TSKLW      +LV PAL+ SL NL L+Y+DLY+IHFPV+LKPG T FP +   K   + +D    WEA+E+C++ GLTKSIGVSNF  K+LE++L     K  P  NQVE +P + Q KL DFC+    +L
Sbjct:   13 GHFIPVLGFGTFAPREVPKSEALEVTK----FAIEAGFRHIDSAHLYQNEEQVGQAIRSKIADGTVK-REDIFYTSKLWSTSLRPELVRPALEKSLNNLQLDYVDLYIIHFPVALKPGETLFPTDENGKPIFDSVDLCRTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYFNQSKLLDFCKSHDIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: PGFS2_BOVIN (Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1)

HSP 1 Score: 167.933 bits (424), Expect = 4.801e-41
Identity = 96/206 (46.60%), Postives = 129/206 (62.62%), Query Frame = 2
Query:   71 GKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGFPYNKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G  IP++GFGT    + P   A EA K     AIEVG+RH D+A +YQ+EE +G+AI   +  G +K R+++F TSKLW      +LV PAL+ SL+NL L+Y+DLY+IH PVSLKPG  F    E      + +D    WEA+E+C++ GLTKSIGVSNF  K+LE++L     K  P  NQVE +P   Q KL +FC+    +L
Sbjct:   13 GHFIPVLGFGTYAPEEVPKSEALEATK----FAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVK-REDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGNKFVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYLNQSKLLEFCKSHDIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: PGFS1_BOVIN (Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3)

HSP 1 Score: 167.933 bits (424), Expect = 4.801e-41
Identity = 96/206 (46.60%), Postives = 129/206 (62.62%), Query Frame = 2
Query:   71 GKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGFPYNKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G  IP++GFGT    + P   A EA K     AIEVG+RH D+A +YQ+EE +G+AI   +  G +K R+++F TSKLW      +LV PAL+ SL+NL L+Y+DLY+IH PVSLKPG  F    E      + +D    WEA+E+C++ GLTKSIGVSNF  K+LE++L     K  P  NQVE +P   Q KL +FC+    +L
Sbjct:   13 GHFIPVLGFGTYAPEEVPKSEALEATK----FAIEVGFRHVDSAHLYQNEEQVGQAIRSKIADGTVK-REDIFYTSKLWCNSLQPELVRPALEKSLQNLQLDYVDLYIIHSPVSLKPGNKFVPKDESGKLIFDSVDLCHTWEALEKCKDAGLTKSIGVSNFNHKQLEKILNKPGLKYKPVCNQVECHPYLNQSKLLEFCKSHDIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: AK1C2_HUMAN (Aldo-keto reductase family 1 member C2 OS=Homo sapiens GN=AKR1C2 PE=1 SV=3)

HSP 1 Score: 165.622 bits (418), Expect = 2.383e-40
Identity = 96/206 (46.60%), Postives = 128/206 (62.14%), Query Frame = 2
Query:   71 GKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGFPYNKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G  +P++GFGT   A+ P   A EAVK     AIE G+ H D+A +Y +EE +G AI   +  G +K R+++F TSKLW      +LV PAL+ SLKNL L+Y+DLYLIHFPVS+KPG       E+     + +D    WEAME+C++ GL KSIGVSNF  + LE +L     K  P  NQVE +P + Q+KL DFC+ K  +L
Sbjct:   13 GHFMPVLGFGTYAPAEVPKSKALEAVKL----AIEAGFHHIDSAHVYNNEEQVGLAIRSKIADGSVK-REDIFYTSKLWSNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNHRLLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFU (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fuscata fuscata GN=AKR1C1 PE=2 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.112e-40
Identity = 96/206 (46.60%), Postives = 127/206 (61.65%), Query Frame = 2
Query:   71 GKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGFPYNKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G  +P++GFGT   A+ P   A EA K     AIE G+RH D+A +Y +EE +G AI   +  G +K R+++F TSKLW      + V PAL+ SLKNL L+Y+DLYLIHFPVSLKPG       E+     + +D    WEAME+C++ GL KSIGVSNF  ++LE +L     K  P  NQVE +P   Q+KL DFC+ K  +L
Sbjct:   13 GHFMPVLGFGTYAPAEVPKNKAIEATKL----AIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVK-REDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKPGEELIPKDENGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQRKLLDFCKSKDIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: AK1C1_MACFA (Aldo-keto reductase family 1 member C1 homolog OS=Macaca fascicularis GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.112e-40
Identity = 96/206 (46.60%), Postives = 127/206 (61.65%), Query Frame = 2
Query:   71 GKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGFPYNKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G  +P++GFGT   A+ P   A EA K     AIE G+RH D+A +Y +EE +G AI   +  G +K R+++F TSKLW      + V PAL+ SLKNL L+Y+DLYLIHFPVSLKPG       E+     + +D    WEAME+C++ GL KSIGVSNF  ++LE +L     K  P  NQVE +P   Q+KL DFC+ K  +L
Sbjct:   13 GHFMPVLGFGTYAPAEVPKNKALEATKL----AIEAGFRHIDSAHLYNNEEYVGLAIRSKIADGTVK-REDIFYTSKLWCNSHRPEFVRPALERSLKNLQLDYVDLYLIHFPVSLKPGEELIPKDENGKLLFDTVDLCATWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYLNQRKLLDFCKSKDIVL 213          
BLAST of FC868730 vs. ExPASy Swiss-Prot
Match: AK1C1_HUMAN (Aldo-keto reductase family 1 member C1 OS=Homo sapiens GN=AKR1C1 PE=1 SV=1)

HSP 1 Score: 165.236 bits (417), Expect = 3.112e-40
Identity = 95/206 (46.12%), Postives = 129/206 (62.62%), Query Frame = 2
Query:   71 GKTIPLVGFGT---AQFPFGAATEAVKESVVHAIEVGYRHFDTAAIYQSEEPLGEAIAQALRLGLIKSRDELFITSKLWFGRAHRQLVLPALQTSLKNLGLEYIDLYLIHFPVSLKPGTGFPYNKED----IEPLDYEGVWEAMEECQNLGLTKSIGVSNFACKKLERLL--ATAKIPPAVNQVELNPVWQQKKLRDFCEKKAFIL 661
            G  +P++GFGT   A+ P   A EA K     AIE G+RH D+A +Y +EE +G AI   +  G +K R+++F TSKLW      +LV PAL+ SLKNL L+Y+DLYLIHFPVS+KPG       E+     + +D    WEA+E+C++ GL KSIGVSNF  ++LE +L     K  P  NQVE +P + Q+KL DFC+ K  +L
Sbjct:   13 GHFMPVLGFGTYAPAEVPKSKALEATKL----AIEAGFRHIDSAHLYNNEEQVGLAIRSKIADGSVK-REDIFYTSKLWCNSHRPELVRPALERSLKNLQLDYVDLYLIHFPVSVKPGEEVIPKDENGKILFDTVDLCATWEAVEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNQRKLLDFCKSKDIVL 213          
The following BLAST results are available for this feature:
BLAST of FC868730 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 129
Match NameE-valueIdentityDescription
NADO1_ORYSJ3.248e-5953.62Probable NAD(P)H-dependent oxidoreductase 1 OS=Ory... [more]
6DCS_SOYBN4.323e-5855.67NAD(P)H-dependent 6'-deoxychalcone synthase OS=Gly... [more]
NADO2_ORYSJ3.848e-5749.76Probable NAD(P)H-dependent oxidoreductase 2 OS=Ory... [more]
DDBX_BOVIN2.815e-4147.09Dihydrodiol dehydrogenase 3 OS=Bos taurus PE=2 SV=... [more]
PGFS2_BOVIN4.801e-4146.60Prostaglandin F synthase 2 OS=Bos taurus PE=2 SV=1[more]
PGFS1_BOVIN4.801e-4146.60Prostaglandin F synthase 1 OS=Bos taurus PE=1 SV=3[more]
AK1C2_HUMAN2.383e-4046.60Aldo-keto reductase family 1 member C2 OS=Homo sap... [more]
AK1C1_MACFU3.112e-4046.60Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1C1_MACFA3.112e-4046.60Aldo-keto reductase family 1 member C1 homolog OS=... [more]
AK1C1_HUMAN3.112e-4046.12Aldo-keto reductase family 1 member C1 OS=Homo sap... [more]

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Properties
Property NameValue
Genbank descriptionC31004B03EF AbioticL1 Citrus clementina cDNA clone C31004B03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868730 ID=FC868730; Name=FC868730; organism=Citrus clementina; type=EST; length=722bp
GGCACCTTGATTCCTCTTCGTTGTCAATGAAACAATGGTAAGCATCCCAG
AGGCTCCTTTGGGCTCCACCGGCAAAACCATACCTCTTGTTGGCTTCGGC
ACGGCCCAATTTCCGTTCGGAGCAGCCACTGAAGCAGTAAAAGAATCCGT
TGTGCATGCAATAGAAGTCGGCTACAGACACTTCGACACCGCCGCAATAT
ACCAGTCCGAGGAGCCTCTTGGGGAAGCAATAGCCCAAGCGTTGCGTCTT
GGGCTCATCAAATCACGCGATGAGCTCTTTATCACTTCAAAGCTTTGGTT
CGGCCGCGCACACCGTCAACTTGTCCTCCCTGCGCTGCAAACTTCTCTCA
AGAATCTGGGGTTGGAGTATATTGATTTGTATCTGATTCATTTTCCGGTA
AGCTTGAAGCCTGGAACAGGGTTCCCATACAATAAAGAAGATATTGAGCC
ACTTGATTATGAGGGTGTTTGGGAGGCCATGGAGGAGTGTCAAAATCTCG
GCCTCACTAAATCCATTGGAGTCAGCAACTTTGCTTGCAAGAAACTTGAG
AGGTTACTTGCTACTGCAAAAATCCCTCCTGCTGTCAATCAAGTGGAGTT
GAACCCAGTTTGGCAGCAAAAGAAGCTGAGAGATTTCTGTGAGAAGAAGG
CATTCATATTACAGCCTACTCGCCGTTAGGAGCCAAAGAACAGTATGGGG
AACTAATCGAGTCATGGAATGT
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