FC868791

Overview
NameFC868791
Unique NameFC868791
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length714
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9479 contig Ccv1_Contig9479:10..724. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868791 vs. ExPASy Swiss-Prot
Match: RD22_ARATH (Dehydration-responsive protein RD22 OS=Arabidopsis thaliana GN=RD22 PE=2 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.875e-31
Identity = 89/231 (38.53%), Postives = 111/231 (48.05%), Query Frame = 1
Query:  112 VASHAAISPELYWKTVLPNSPMPKAVKDLLQPDVLEDKSTSVNVGKGGVN----------------------VDAGKXXXXXXXXXXXXXXXXXXXXXXXD-----KRXXXXXXXXXXXXXXXXXXXPVYAGV----SPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTS--NGAT-FLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 702
            VA  A ++PE YW T LPN+P+P ++ +LL  D  ++KST+V VGKGGVN                      VD GK                             KR                   P+Y GV    +PF Y YAA E QLHDDPN ALFFLEKDL  G +MN+ F       G T FL R  A++ PF S+K  E   +FSV+ GS EAE+M+ TI+ECE
Sbjct:   17 VAIAADLTPERYWSTALPNTPIPNSLHNLLTFDFTDEKSTNVQVGKGGVNVNTHKGKTGSGTAVNVGKGGVRVDTGKGKPGGGTHVSVGSGKGHGGGVAVHTGKPGKRTDVGVGKGGVTVHTRHKGRPIYVGVKPGANPFVYNYAAKETQLHDDPNAALFFLEKDLVRGKEMNVRFNAEDGYGGKTAFLPRGEAETVPFGSEKFSETLKRFSVEAGSEEAEMMKKTIEECE 247          
BLAST of FC868791 vs. ExPASy Swiss-Prot
Match: BURP3_ORYSJ (BURP domain-containing protein 3 OS=Oryza sativa subsp. japonica GN=BURP3 PE=2 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 4.901e-30
Identity = 62/99 (62.63%), Postives = 74/99 (74.75%), Query Frame = 1
Query:  412 PVYAGVSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDP 708
            PV+  V+PF Y YAA E QLHDDPN ALFFLEKDLHPG  M +HFT T+ G  FL R  A + PFSS+K+PEI ++FSVKPGSVEA  M  T+++CE P
Sbjct:  185 PVHVNVAPFIYNYAATETQLHDDPNVALFFLEKDLHPGKTMAVHFTATTAGEKFLPRSEADAMPFSSEKVPEILSRFSVKPGSVEAAEMAQTLRDCEAP 283          
BLAST of FC868791 vs. ExPASy Swiss-Prot
Match: BURP6_ORYSJ (BURP domain-containing protein 6 OS=Oryza sativa subsp. japonica GN=BURP6 PE=2 SV=1)

HSP 1 Score: 83.9593 bits (206), Expect = 8.973e-16
Identity = 41/76 (53.95%), Postives = 52/76 (68.42%), Query Frame = 1
Query:  475 DDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 702
            +D    +FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q SV  GS  A+ M++T+ ECE
Sbjct:   21 EDTVNNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSVPAGSPAADAMRSTLAECE 96          
BLAST of FC868791 vs. ExPASy Swiss-Prot
Match: BURP2_ORYSJ (BURP domain-containing protein 2 OS=Oryza sativa subsp. japonica GN=BURP2 PE=2 SV=1)

HSP 1 Score: 83.1889 bits (204), Expect = 1.531e-15
Identity = 41/84 (48.81%), Postives = 57/84 (67.86%), Query Frame = 1
Query:  451 AANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 702
            AA+ ++  +D   ++FFLEKDL PG KM LHFT+ + GA  L R  A S PF+S+KLPEI +Q S+  GS  A+ M++T+  CE
Sbjct:   52 AASASKDKEDTVGSVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRADSVPFASEKLPEILSQLSIPAGSPTADAMRSTLAVCE 135          
BLAST of FC868791 vs. ExPASy Swiss-Prot
Match: BURP1_ORYSJ (BURP domain-containing protein 1 OS=Oryza sativa subsp. japonica GN=BURP1 PE=2 SV=1)

HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14
Identity = 42/92 (45.65%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  427 VSPFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 702
            +SP + V +A++    +D    +FFLEKDL PG KM LHFT+ + GA  L R  A+S PF+S++LPEI +Q S+   S  A+ M +T+ ECE
Sbjct:   46 ISPASSVGSASK----EDTVGNVFFLEKDLFPGSKMTLHFTRATAGAALLPRGRAESVPFASERLPEILSQLSIPAVSPTADAMWSTLAECE 133          
BLAST of FC868791 vs. ExPASy Swiss-Prot
Match: BURP8_ORYSJ (BURP domain-containing protein 8 OS=Oryza sativa subsp. japonica GN=BURP8 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.433e-13
Identity = 43/85 (50.59%), Postives = 55/85 (64.71%), Query Frame = 1
Query:  451 AANENQLHDDPNT-ALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECE 702
            A+ E+   D+ +T A+FFLEKDL PG K+ LHFT+    A  L R  A + PF+S+KLPEI  Q SV  GS  AE M+ T+ ECE
Sbjct:   82 ASQEDTDMDEVSTDAVFFLEKDLFPGSKITLHFTRGGACAMVLLRGRADAIPFASEKLPEILTQLSVPAGSRAAEDMRTTLAECE 166          
BLAST of FC868791 vs. ExPASy Swiss-Prot
Match: BURP5_ORYSJ (BURP domain-containing protein 5 OS=Oryza sativa subsp. japonica GN=BURP5 PE=2 SV=2)

HSP 1 Score: 76.6406 bits (187), Expect = 1.433e-13
Identity = 41/92 (44.57%), Postives = 53/92 (57.61%), Query Frame = 1
Query:  433 PFNYVYAANENQLHDDPNTALFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDP 708
            P  Y  AA++ Q   DP   LFFLE +L     + LHF     G  FL R  A + PFSS  L EI  +F V+PGSV+A +++NT+ ECE P
Sbjct:   89 PNIYGLAASQ-QFFKDPTMGLFFLETNLQSSKSIKLHFANMMAGTKFLPRGEADAVPFSSKDLQEILARFGVRPGSVDASVVKNTLLECELP 179          
BLAST of FC868791 vs. ExPASy Swiss-Prot
Match: BURPH_ORYSJ (BURP domain-containing protein 17 OS=Oryza sativa subsp. japonica GN=BURP17 PE=2 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13
Identity = 41/85 (48.24%), Postives = 55/85 (64.71%), Query Frame = 1
Query:  466 QLHDDPNTALFFLEKDLHPGMKMN--LHFTQ--TSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIMQNTIKECEDP 708
            +L  DP+ ALFFLEK+L  G K+N  LHF     +  + FL R  A S PFSS +LPEI ++F V+PGS +A  M  T+++CE P
Sbjct:  353 ELLKDPDMALFFLEKNLQQGKKINNALHFANLLATTNSKFLPRGKADSIPFSSKELPEILDRFGVRPGSDDAAEMSATLQDCELP 437          
BLAST of FC868791 vs. ExPASy Swiss-Prot
Match: BURP7_ORYSJ (BURP domain-containing protein 7 OS=Oryza sativa subsp. japonica GN=BURP7 PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 5.095e-11
Identity = 33/62 (53.23%), Postives = 42/62 (67.74%), Query Frame = 1
Query:  493 LFFLEKDLHPGMKMNLHFTQTSNGATFLSRQAAKSTPFSSDKLPEIFNQFSVKPGSVEAEIM 678
            +FFLEKDL PG K+ LHFT+ + GA  L R  A S P +++KLPEI +Q SV  GS  A+ M
Sbjct:   64 VFFLEKDLFPGSKLTLHFTRATAGAALLPRGRADSVPLATEKLPEILSQLSVPAGSPAADAM 125          
The following BLAST results are available for this feature:
BLAST of FC868791 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 9
Match NameE-valueIdentityDescription
RD22_ARATH9.875e-3138.53Dehydration-responsive protein RD22 OS=Arabidopsis... [more]
BURP3_ORYSJ4.901e-3062.63BURP domain-containing protein 3 OS=Oryza sativa s... [more]
BURP6_ORYSJ8.973e-1653.95BURP domain-containing protein 6 OS=Oryza sativa s... [more]
BURP2_ORYSJ1.531e-1548.81BURP domain-containing protein 2 OS=Oryza sativa s... [more]
BURP1_ORYSJ2.210e-1445.65BURP domain-containing protein 1 OS=Oryza sativa s... [more]
BURP8_ORYSJ1.433e-1350.59BURP domain-containing protein 8 OS=Oryza sativa s... [more]
BURP5_ORYSJ1.433e-1344.57BURP domain-containing protein 5 OS=Oryza sativa s... [more]
BURPH_ORYSJ7.110e-1348.24BURP domain-containing protein 17 OS=Oryza sativa ... [more]
BURP7_ORYSJ5.095e-1153.23BURP domain-containing protein 7 OS=Oryza sativa s... [more]
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Properties
Property NameValue
Genbank descriptionC31004G12EF AbioticL1 Citrus clementina cDNA clone C31004G12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868791 ID=FC868791; Name=FC868791; organism=Citrus clementina; type=EST; length=714bp
CTAGATTTTAGATCCATACTATCTTGTATTCTGAGTGTCTTTTGAAACAT
ACTCAAAGCTATAATGGAGTTTCGCTTGTTGCCCATCCTTGCTTTCCTCA
GTCTAGCACTGGTGGCAAGTCATGCTGCCATTTCTCCTGAGCTTTACTGG
AAAACTGTATTGCCAAATTCCCCGATGCCAAAAGCTGTCAAAGATCTTCT
ACAGCCAGATGTGCTGGAAGACAAAAGCACCTCTGTCAACGTAGGGAAGG
GTGGTGTCAATGTGGATGCAGGGAAAGGAAAGCCCGGTGGTGGCACCCAT
GTGAATGTTGGGGGTAAGGGCGTTGGTGTAAACACTGGAAAGCCTGACAA
AAGAACCAGTGTTGGTGTTGGCAAAGGAGGAGTATCCGTAAGTACAGGAC
ACAAGGGAAAGCCAGTTTATGCTGGAGTAAGCCCATTCAACTATGTATAT
GCTGCAAATGAGAACCAACTCCATGATGACCCGAATACAGCTCTTTTCTT
CTTGGAAAAGGACTTGCATCCTGGGATGAAGATGAACTTGCACTTCACTC
AAACTTCAAATGGAGCAACTTTCTTATCTCGCCAAGCTGCCAAATCAACT
CCTTTCTCGTCTGACAAATTGCCTGAGATCTTTAACCAGTTTTCCGTGAA
ACCTGGATCAGTTGAAGCTGAAATAATGCAGAACACAATCAAAGAGTGTG
AAGACCCTGGCATT
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