FC868806
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_NICSY (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana sylvestris GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.417e-15 Identity = 35/40 (87.50%), Postives = 39/40 (97.50%), Query Frame = 3 Query: 516 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 MALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK Sbjct: 3 MALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSK 42 HSP 2 Score: 26.9498 bits (58), Expect = 1.417e-15 Identity = 12/16 (75.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIV 679 K LDEIL PA CTIV Sbjct: 42 KAQLDEILGPAECTIV 57
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_TOBAC (S-adenosylmethionine decarboxylase proenzyme OS=Nicotiana tabacum GN=SAMDC PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.251e-15 Identity = 34/39 (87.18%), Postives = 38/39 (97.44%), Query Frame = 3 Query: 519 ALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 ALPVSAIGFEG+EKRLE+SFFEPG+FADP G+GLRSLSK Sbjct: 4 ALPVSAIGFEGFEKRLEISFFEPGLFADPNGKGLRSLSK 42 HSP 2 Score: 26.9498 bits (58), Expect = 5.251e-15 Identity = 12/16 (75.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIV 679 K LDEIL PA CTIV Sbjct: 42 KAQLDEILGPAECTIV 57
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_SOLTU (S-adenosylmethionine decarboxylase proenzyme OS=Solanum tuberosum GN=SAMDC PE=1 SV=1) HSP 1 Score: 72.0182 bits (175), Expect = 3.283e-14 Identity = 33/41 (80.49%), Postives = 38/41 (92.68%), Query Frame = 3 Query: 513 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 +M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSLSK Sbjct: 2 EMDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLSK 42 HSP 2 Score: 26.9498 bits (58), Expect = 3.283e-14 Identity = 12/16 (75.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIV 679 K LDEIL PA CTIV Sbjct: 42 KAQLDEILGPAECTIV 57
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_IPONI (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea nil GN=SAMDC PE=3 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 5.540e-14 Identity = 32/40 (80.00%), Postives = 36/40 (90.00%), Query Frame = 3 Query: 516 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 MAL SAIGFEGYEKRLE+SFFE G+F+DP GRGLR+LSK Sbjct: 1 MALSTSAIGFEGYEKRLEISFFEAGIFSDPEGRGLRALSK 40 HSP 2 Score: 28.8758 bits (63), Expect = 5.540e-14 Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIVS 682 K LD++LKPA CTIVS Sbjct: 40 KEQLDKVLKPAECTIVS 56
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_DATST (S-adenosylmethionine decarboxylase proenzyme OS=Datura stramonium GN=SAMDC PE=2 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 7.197e-14 Identity = 32/41 (78.05%), Postives = 38/41 (92.68%), Query Frame = 3 Query: 513 KMALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 +M LPVSAIGFEG+EKRLE+SF EPG+F+DP G+GLRSLSK Sbjct: 2 EMDLPVSAIGFEGFEKRLEISFVEPGLFSDPNGKGLRSLSK 42 HSP 2 Score: 26.9498 bits (58), Expect = 7.197e-14 Identity = 12/16 (75.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIV 679 K LDEIL PA CTIV Sbjct: 42 KAQLDEILGPAECTIV 57
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_SOLCI (S-adenosylmethionine decarboxylase proenzyme OS=Solanum chilense GN=SAMDC PE=2 SV=1) HSP 1 Score: 70.4774 bits (171), Expect = 9.354e-14 Identity = 32/40 (80.00%), Postives = 37/40 (92.50%), Query Frame = 3 Query: 516 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 M LPVSAIGFEG+EKRLE+SF EPG+FADP G+GLRSL+K Sbjct: 1 MDLPVSAIGFEGFEKRLEISFVEPGLFADPNGKGLRSLTK 40 HSP 2 Score: 26.9498 bits (58), Expect = 9.354e-14 Identity = 12/16 (75.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIV 679 K LDEIL PA CTIV Sbjct: 40 KAQLDEILGPAECTIV 55
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_IPOBA (S-adenosylmethionine decarboxylase proenzyme OS=Ipomoea batatas GN=SAMDC PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 2.049e-13 Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 516 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 MAL SAIGFEGYE RLE+SFFE G+F+DP GRGLR+LSK Sbjct: 1 MALSTSAIGFEGYENRLEISFFEAGIFSDPEGRGLRALSK 40 HSP 2 Score: 28.8758 bits (63), Expect = 2.049e-13 Identity = 12/17 (70.59%), Postives = 14/17 (82.35%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIVS 682 K LD++LKPA CTIVS Sbjct: 40 KEQLDKVLKPAECTIVS 56
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM_CATRO (S-adenosylmethionine decarboxylase proenzyme OS=Catharanthus roseus GN=SAMDC PE=1 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 3.459e-13 Identity = 31/40 (77.50%), Postives = 35/40 (87.50%), Query Frame = 3 Query: 516 MALPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 MALP SAIGFEGYEKRLE+SFFE FADP G+GLR+L+K Sbjct: 1 MALPASAIGFEGYEKRLEISFFESSFFADPDGKGLRALNK 40 HSP 2 Score: 27.7202 bits (60), Expect = 3.459e-13 Identity = 11/16 (68.75%), Postives = 14/16 (87.50%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIV 679 K+ +DEIL+PA CTIV Sbjct: 40 KSQIDEILEPAECTIV 55
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM2_DIACA (S-adenosylmethionine decarboxylase proenzyme 2 OS=Dianthus caryophyllus GN=SAMDC2 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 4.485e-13 Identity = 29/40 (72.50%), Postives = 36/40 (90.00%), Query Frame = 3 Query: 522 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSKHH 641 + +SAIGFEG+EKRLE+SFFEPG+F DP G+GLR+LSK H Sbjct: 16 MTISAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSKAH 55 HSP 2 Score: 26.5646 bits (57), Expect = 4.485e-13 Identity = 12/16 (75.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIV 679 K LDEIL PA CTIV Sbjct: 53 KAHLDEILGPAECTIV 68
BLAST of FC868806 vs. ExPASy Swiss-Prot
Match: DCAM1_DIACA (S-adenosylmethionine decarboxylase proenzyme 1 OS=Dianthus caryophyllus GN=SAMDC1 PE=2 SV=1) HSP 1 Score: 65.4698 bits (158), Expect = 2.794e-12 Identity = 28/38 (73.68%), Postives = 35/38 (92.11%), Query Frame = 3 Query: 522 LPVSAIGFEGYEKRLEVSFFEPGVFADPGGRGLRSLSK 635 + +SAIGFEG+EKRLE+SFFEPG+F DP G+GLR+LSK Sbjct: 25 MALSAIGFEGFEKRLEISFFEPGIFVDPEGKGLRALSK 62 HSP 2 Score: 26.9498 bits (58), Expect = 2.794e-12 Identity = 12/16 (75.00%), Postives = 12/16 (75.00%), Query Frame = 2 Query: 632 KTSLDEILKPAXCTIV 679 K LDEIL PA CTIV Sbjct: 62 KAQLDEILGPAECTIV 77 The following BLAST results are available for this feature:
BLAST of FC868806 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 16
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868806 ID=FC868806; Name=FC868806; organism=Citrus clementina; type=EST; length=682bpback to top |