FC868821

Overview
NameFC868821
Unique NameFC868821
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length710
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868821 vs. ExPASy Swiss-Prot
Match: SAPK8_ORYSJ (Serine/threonine-protein kinase SAPK8 OS=Oryza sativa subsp. japonica GN=SAPK8 PE=2 SV=1)

HSP 1 Score: 143.665 bits (361), Expect = 9.506e-34
Identity = 68/83 (81.93%), Postives = 77/83 (92.77%), Query Frame = 2
Query:  461 AMDRSAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAV*YIERGDKIDENXAREIYHHRSLRHPNIVRF 709
            A DR+A+TVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRD++T ELVAV YIERG+KID+N  REI +HRSL+HPNI+RF
Sbjct:   10 APDRAALTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDRRTMELVAVKYIERGEKIDDNVQREIINHRSLKHPNIIRF 92          
BLAST of FC868821 vs. ExPASy Swiss-Prot
Match: SAPKA_ORYSJ (Serine/threonine-protein kinase SAPK10 OS=Oryza sativa subsp. japonica GN=SAPK10 PE=2 SV=1)

HSP 1 Score: 140.198 bits (352), Expect = 1.051e-32
Identity = 67/82 (81.71%), Postives = 73/82 (89.02%), Query Frame = 2
Query:  464 MDRSAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAV*YIERGDKIDENXAREIYHHRSLRHPNIVRF 709
            MDR+A+TVGPGMDMPIMHD DRYELVRDIGSGNFGVARLMR +   +LVAV YIERGDKIDEN  REI +HRSLRHPNI+RF
Sbjct:    1 MDRAALTVGPGMDMPIMHDGDRYELVRDIGSGNFGVARLMRSRADGQLVAVKYIERGDKIDENVQREIINHRSLRHPNIIRF 82          
BLAST of FC868821 vs. ExPASy Swiss-Prot
Match: SRK2I_ARATH (Serine/threonine-protein kinase SRK2I OS=Arabidopsis thaliana GN=SRK2I PE=1 SV=1)

HSP 1 Score: 134.035 bits (336), Expect = 7.532e-31
Identity = 66/82 (80.49%), Postives = 73/82 (89.02%), Query Frame = 2
Query:  464 MDRSAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAV*YIERGDKIDENXAREIYHHRSLRHPNIVRF 709
            MDR+ +T GP +DMPIMHDSDRY+ V+DIGSGNFGVARLMRDK T+ELVAV YIERGDKIDEN  REI +HRSLRHPNIVRF
Sbjct:    1 MDRAPVTTGP-LDMPIMHDSDRYDFVKDIGSGNFGVARLMRDKLTKELVAVKYIERGDKIDENVQREIINHRSLRHPNIVRF 81          
BLAST of FC868821 vs. ExPASy Swiss-Prot
Match: SRK2E_ARATH (Serine/threonine-protein kinase SRK2E OS=Arabidopsis thaliana GN=SRK2E PE=1 SV=1)

HSP 1 Score: 129.413 bits (324), Expect = 1.855e-29
Identity = 66/82 (80.49%), Postives = 74/82 (90.24%), Query Frame = 2
Query:  464 MDRSAMTVGPGMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAV*YIERGDKIDENXAREIYHHRSLRHPNIVRF 709
            MDR A++ GP MD+PIMHDSDRYELV+DIGSGNFGVARLMRDK++ ELVAV YIERG+KIDEN  REI +HRSLRHPNIVRF
Sbjct:    1 MDRPAVS-GP-MDLPIMHDSDRYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRF 80          
BLAST of FC868821 vs. ExPASy Swiss-Prot
Match: SAPK9_ORYSJ (Serine/threonine-protein kinase SAPK9 OS=Oryza sativa subsp. japonica GN=SAPK9 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 2.507e-26
Identity = 59/83 (71.08%), Postives = 72/83 (86.75%), Query Frame = 2
Query:  464 MDRSAMTVGP-GMDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAV*YIERGDKIDENXAREIYHHRSLRHPNIVRF 709
            M+R+A   GP GM+MPIMHD DRYELV++IGSGNFGVARLMR++ + +LVAV YI+RG+KIDEN  REI +HRSLRHPNI+RF
Sbjct:    1 MERAA--AGPLGMEMPIMHDGDRYELVKEIGSGNFGVARLMRNRASGDLVAVKYIDRGEKIDENVQREIINHRSLRHPNIIRF 81          
BLAST of FC868821 vs. ExPASy Swiss-Prot
Match: SRK2D_ARATH (Serine/threonine-protein kinase SRK2D OS=Arabidopsis thaliana GN=SRK2D PE=1 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 3.275e-26
Identity = 56/71 (78.87%), Postives = 64/71 (90.14%), Query Frame = 2
Query:  497 MDMPIMHDSDRYELVRDIGSGNFGVARLMRDKKTEELVAV*YIERGDKIDENXAREIYHHRSLRHPNIVRF 709
            +D+PIMHDSDRY+ V+DIGSGNFGVARLM D+ T+ELVAV YIERG+KIDEN  REI +HRSLRHPNIVRF
Sbjct:   12 IDLPIMHDSDRYDFVKDIGSGNFGVARLMTDRVTKELVAVKYIERGEKIDENVQREIINHRSLRHPNIVRF 82          
BLAST of FC868821 vs. ExPASy Swiss-Prot
Match: SRK2B_ARATH (Serine/threonine-protein kinase SRK2B OS=Arabidopsis thaliana GN=SRK2B PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 7.066e-21
Identity = 48/62 (77.42%), Postives = 56/62 (90.32%), Query Frame = 2
Query:  524 DRYELVRDIGSGNFGVARLMRDKKTEELVAV*YIERGDKIDENXAREIYHHRSLRHPNIVRF 709
            D+YELV+DIG+GNFGVARLMR K ++ELVA+ YIERG KIDEN AREI +HRSLRHPNI+RF
Sbjct:    2 DKYELVKDIGAGNFGVARLMRVKNSKELVAMKYIERGPKIDENVAREIINHRSLRHPNIIRF 63          
BLAST of FC868821 vs. ExPASy Swiss-Prot
Match: SRK2H_ARATH (Serine/threonine-protein kinase SRK2H OS=Arabidopsis thaliana GN=SRK2H PE=1 SV=1)

HSP 1 Score: 100.138 bits (248), Expect = 1.205e-20
Identity = 46/62 (74.19%), Postives = 57/62 (91.94%), Query Frame = 2
Query:  524 DRYELVRDIGSGNFGVARLMRDKKTEELVAV*YIERGDKIDENXAREIYHHRSLRHPNIVRF 709
            D+YE+V+D+G+GNFGVARL+R K+T+ELVA+ YIERG KIDEN AREI +HRSLRHPNI+RF
Sbjct:    2 DKYEVVKDLGAGNFGVARLLRHKETKELVAMKYIERGRKIDENVAREIINHRSLRHPNIIRF 63          
BLAST of FC868821 vs. ExPASy Swiss-Prot
Match: SRK2A_ARATH (Serine/threonine-protein kinase SRK2A OS=Arabidopsis thaliana GN=SRK2A PE=1 SV=1)

HSP 1 Score: 99.7525 bits (247), Expect = 1.574e-20
Identity = 47/62 (75.81%), Postives = 56/62 (90.32%), Query Frame = 2
Query:  524 DRYELVRDIGSGNFGVARLMRDKKTEELVAV*YIERGDKIDENXAREIYHHRSLRHPNIVRF 709
            D+YELV+DIG+GNFGVARLM+ K ++ELVA+ YIERG KIDEN AREI +HRSLRHPNI+RF
Sbjct:    2 DKYELVKDIGAGNFGVARLMKVKNSKELVAMKYIERGPKIDENVAREIINHRSLRHPNIIRF 63          
BLAST of FC868821 vs. ExPASy Swiss-Prot
Match: SAPK7_ORYSJ (Serine/threonine-protein kinase SAPK7 OS=Oryza sativa subsp. japonica GN=SAPK7 PE=2 SV=2)

HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20
Identity = 47/62 (75.81%), Postives = 57/62 (91.94%), Query Frame = 2
Query:  524 DRYELVRDIGSGNFGVARLMRDKKTEELVAV*YIERGDKIDENXAREIYHHRSLRHPNIVRF 709
            +RYEL++DIG+GNFGVARLMR+K+T+ELVA+ YI RG KIDEN AREI +HRSLRHPNI+RF
Sbjct:    2 ERYELLKDIGAGNFGVARLMRNKETKELVAMKYIPRGLKIDENVAREIINHRSLRHPNIIRF 63          
The following BLAST results are available for this feature:
BLAST of FC868821 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 23
Match NameE-valueIdentityDescription
SAPK8_ORYSJ9.506e-3481.93Serine/threonine-protein kinase SAPK8 OS=Oryza sat... [more]
SAPKA_ORYSJ1.051e-3281.71Serine/threonine-protein kinase SAPK10 OS=Oryza sa... [more]
SRK2I_ARATH7.532e-3180.49Serine/threonine-protein kinase SRK2I OS=Arabidops... [more]
SRK2E_ARATH1.855e-2980.49Serine/threonine-protein kinase SRK2E OS=Arabidops... [more]
SAPK9_ORYSJ2.507e-2671.08Serine/threonine-protein kinase SAPK9 OS=Oryza sat... [more]
SRK2D_ARATH3.275e-2678.87Serine/threonine-protein kinase SRK2D OS=Arabidops... [more]
SRK2B_ARATH7.066e-2177.42Serine/threonine-protein kinase SRK2B OS=Arabidops... [more]
SRK2H_ARATH1.205e-2074.19Serine/threonine-protein kinase SRK2H OS=Arabidops... [more]
SRK2A_ARATH1.574e-2075.81Serine/threonine-protein kinase SRK2A OS=Arabidops... [more]
SAPK7_ORYSJ2.056e-2075.81Serine/threonine-protein kinase SAPK7 OS=Oryza sat... [more]

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Properties
Property NameValue
Genbank descriptionC31005B09EF AbioticL1 Citrus clementina cDNA clone C31005B09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868821 ID=FC868821; Name=FC868821; organism=Citrus clementina; type=EST; length=710bp
GCTCCCAAAGGTTTTCGGATAAAACGCAGAGTAAAAAATAAAAAAGAAAG
CCATAAAGAGAAGGAACAAAAACAAACCGTGTCTCGGTGTCCGTACAGTT
CTAGAGGGTGACAGAGTGAGACTTGAACGTCTCAGTTTCGTAATCACGAC
TTCACGAGCTTCTTTCTTCGTTCTAACAGTCCCTCAACCAGAAAAAAAAA
AATATTCAAAGAGAAAACTCAGTTGGACAGGTGAACTTTTCACGGGCAAA
GTCCCATCATCAGTCTCCTTTATCAACCCACCACAATCCAACCGTCCATA
CTTCGCCACGTTATCACCGCCACCGTCGCCCTGATCGCGATCGTGCTCTT
CTTTGTTCCCATCATATGATAATGTGACTGTTTGGAGTATTTTAATTTCT
TTTATATTTTTTTGGTTGCTTGTTTTGATTTACATATATATATACGCACG
CATATAGAGTGCAATGGATCGATCCGCGATGACGGTGGGTCCCGGCATGG
ACATGCCGATCATGCACGATAGCGATCGGTATGAGCTCGTTCGGGATATT
GGGTCGGGGAATTTTGGGGTGGCCAGGTTGATGAGAGATAAAAAAACTGA
GGAGCTTGTTGCTGTTTAGTATATCGAGCGAGGTGATAAGATTGATGAAA
ATGNTGCAAGAGAAATTTATCACCACAGGTCATTAAGGCATCCCAACATA
GTCAGATTCA
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