FC868844

Overview
NameFC868844
Unique NameFC868844
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length695
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868844 vs. ExPASy Swiss-Prot
Match: BCAT5_ARATH (Branched-chain-amino-acid aminotransferase 5, chloroplastic OS=Arabidopsis thaliana GN=BCAT5 PE=1 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 2.760e-52
Identity = 110/200 (55.00%), Postives = 141/200 (70.50%), Query Frame = 1
Query:   58 MERSSSAVMAGLQPNSLICPFASSRNGCTLF-LPIPNSFSSAAGQSRHCLPPLSLKLQKQTAFTPYHVNQTDSPFKLFSVSSHTLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLA 654
            MERS  AV +G   N ++C   ++ +   L  L    +F S++ + RHC  P+S         + + V++     +  +VSS T   +  +LA+IDWD + FG  PTDYMY MKC RDG FS+G+LQ FGNI+++P++GVLNYGQGLFEGLKAYRKQDGNILLFRPEENA+RM+ GAERMCMPSP+VEQFVEAVK TVLA
Sbjct:    1 MERS--AVASGFHRNYILCASRAATSTTRLHSLSSLRNFPSSSLRIRHCPSPIS---------SNFIVSEVSRNRRCDAVSSST--TDVTELAEIDWDKIDFGLKPTDYMYAMKCSRDGEFSQGQLQPFGNIDINPAAGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAIRMRNGAERMCMPSPTVEQFVEAVKTTVLA 187          

HSP 2 Score: 23.0978 bits (48), Expect = 2.760e-52
Identity = 8/15 (53.33%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  651 SNKRWIPPLVRXLIY 695
            +NKRWIPP  +  +Y
Sbjct:  187 ANKRWIPPPGKGSLY 201          
BLAST of FC868844 vs. ExPASy Swiss-Prot
Match: BCAT3_ARATH (Branched-chain-amino-acid aminotransferase 3, chloroplastic OS=Arabidopsis thaliana GN=BCAT3 PE=1 SV=1)

HSP 1 Score: 199.134 bits (505), Expect = 8.659e-51
Identity = 112/201 (55.72%), Postives = 136/201 (67.66%), Query Frame = 1
Query:   58 MERSSSAVMAGLQPNSLICPFASSRNGCTLFLPIPNSFSSAAGQS-RHCLPPLSLKLQKQTAFTPYHVNQTDSPFKLFSVSSHTLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDG-NILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLA 654
            MER+  A++  +  N L+CP                +FS+    S R+  PP    ++ Q + +    N   S  +  +VSS++ S    +LADIDWD +GFG  P DYMYVMKC  DG FSKGELQRFGNIE+SPS+GVLNYGQGLFEGLKAYRK+DG NILLFRPEENA RM+ GAERMCMP+P+VEQFVEAV  TVLA
Sbjct:    1 MERA--AILPSVNQNYLLCP--------------SRAFSTRLHSSTRNLSPPSFASIKLQHSSSSVSSNGGISLTRCNAVSSNSSSTLVTELADIDWDTVGFGLKPADYMYVMKCNIDGEFSKGELQRFGNIEISPSAGVLNYGQGLFEGLKAYRKKDGNNILLFRPEENAKRMRNGAERMCMPAPTVEQFVEAVTETVLA 185          

HSP 2 Score: 22.7126 bits (47), Expect = 8.659e-51
Identity = 7/15 (46.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  651 SNKRWIPPLVRXLIY 695
            +NKRW+PP  +  +Y
Sbjct:  185 ANKRWVPPPGKGSLY 199          
BLAST of FC868844 vs. ExPASy Swiss-Prot
Match: BCAT2_ARATH (Branched-chain-amino-acid aminotransferase 2, chloroplastic OS=Arabidopsis thaliana GN=BCAT2 PE=1 SV=1)

HSP 1 Score: 169.859 bits (429), Expect = 2.165e-42
Identity = 76/108 (70.37%), Postives = 93/108 (86.11%), Query Frame = 1
Query:  331 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLA 654
            AD+DWDNLGFG  P DYMYVMKC +DG F++GEL  +GNI+LSPS+GVLNYGQ ++EG KAYRK++G +LLFRP+ NA+RM++GAERM MPSPSV+QFV AVK T LA
Sbjct:   54 ADLDWDNLGFGLNPADYMYVMKCSKDGEFTQGELSPYGNIQLSPSAGVLNYGQAIYEGTKAYRKENGKLLLFRPDHNAIRMKLGAERMLMPSPSVDQFVNAVKQTALA 161          

HSP 2 Score: 23.8682 bits (50), Expect = 2.165e-42
Identity = 7/15 (46.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  651 SNKRWIPPLVRXLIY 695
            +NKRW+PP  +  +Y
Sbjct:  161 ANKRWVPPAGKGTLY 175          
BLAST of FC868844 vs. ExPASy Swiss-Prot
Match: BCAT1_ARATH (Branched-chain-amino-acid aminotransferase 1, mitochondrial OS=Arabidopsis thaliana GN=BCAT1 PE=1 SV=2)

HSP 1 Score: 167.933 bits (424), Expect = 3.980e-41
Identity = 81/154 (52.60%), Postives = 103/154 (66.88%), Query Frame = 1
Query:  193 RHCLPPLSLKLQKQTAFTPYHVNQTDSPFKLFSVSSHTLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLA 654
            R CLP  S      +    + ++ T +   +          E  + AD+DWDNLGF    TD+M+  K  RDGNF +G L R+GNIEL+P++G+LNYGQGL EG+KAYR +DG +LLFRPE NAMRM++GAERMCM SPSV QF+E VK TVLA
Sbjct:    4 RRCLPQYSTTSSYLSKIWGFRMHGTKAAASVVEEHVSGAEREDEEYADVDWDNLGFSLVRTDFMFATKSCRDGNFEQGYLSRYGNIELNPAAGILNYGQGLIEGMKAYRGEDGRVLLFRPELNAMRMKIGAERMCMHSPSVHQFIEGVKQTVLA 157          

HSP 2 Score: 21.557 bits (44), Expect = 3.980e-41
Identity = 6/15 (40.00%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  651 SNKRWIPPLVRXLIY 695
            +N+RW+PP  +  +Y
Sbjct:  157 ANRRWVPPPGKGSLY 171          
BLAST of FC868844 vs. ExPASy Swiss-Prot
Match: BCAT7_ARATH (Putative branched-chain-amino-acid aminotransferase 7 OS=Arabidopsis thaliana GN=BCAT7 PE=5 SV=1)

HSP 1 Score: 155.606 bits (392), Expect = 2.319e-37
Identity = 71/110 (64.55%), Postives = 87/110 (79.09%), Query Frame = 1
Query:  331 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLATN 660
            A++ WD LGF   PTDYMYV KC +  +FS GE+  +G+I +SP +G+LNYGQGLFEGLKAYR +DG I LFRP++NA+RMQ GA+R+CM  PS EQFVEAVK TVLA N
Sbjct:   22 ANVKWDELGFALVPTDYMYVAKCKQGESFSTGEIVPYGDISISPCAGILNYGQGLFEGLKAYRTEDGRITLFRPDQNAIRMQTGADRLCMTPPSPEQFVEAVKQTVLANN 131          
BLAST of FC868844 vs. ExPASy Swiss-Prot
Match: BCAT6_ARATH (Branched-chain-amino-acid aminotransferase 6 OS=Arabidopsis thaliana GN=BCAT6 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 3.103e-34
Identity = 66/117 (56.41%), Postives = 88/117 (75.21%), Query Frame = 1
Query:  304 TLSNETIQLADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLA 654
            T S    + A++ W+ LGF   P DYMYV KC +  +F++G++  +G+I +SP S +LNYGQGLFEGLKAYR +D  I +FRP++NA+RMQ GAER+CM  P++EQFVEAVK TVLA
Sbjct:   10 TTSETDEKYANVKWEELGFALTPIDYMYVAKCRQGESFTQGKIVPYGDISISPCSPILNYGQGLFEGLKAYRTEDDRIRIFRPDQNALRMQTGAERLCMTPPTLEQFVEAVKQTVLA 126          

HSP 2 Score: 21.9422 bits (45), Expect = 3.103e-34
Identity = 6/15 (40.00%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  651 SNKRWIPPLVRXLIY 695
            +NK+W+PP  +  +Y
Sbjct:  126 ANKKWVPPPGKGTLY 140          
BLAST of FC868844 vs. ExPASy Swiss-Prot
Match: BCAT4_ARATH (Probable branched-chain-amino-acid aminotransferase 4 OS=Arabidopsis thaliana GN=BCAT4 PE=2 SV=1)

HSP 1 Score: 132.109 bits (331), Expect = 1.117e-30
Identity = 58/108 (53.70%), Postives = 80/108 (74.07%), Query Frame = 1
Query:  331 ADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLA 654
            A++ W+ L F F  TDYMYV KC    +F +G++  F +++L+P + VL YGQGL+EGLKAYR +DG ILLFRP++N +R+Q GA+R+ MP PSV+QFV A+K   LA
Sbjct:   18 ANVKWEELAFKFVRTDYMYVAKCNHGESFQEGKILPFADLQLNPCAAVLQYGQGLYEGLKAYRTEDGRILLFRPDQNGLRLQAGADRLYMPYPSVDQFVSAIKQVALA 125          

HSP 2 Score: 22.3274 bits (46), Expect = 1.117e-30
Identity = 7/15 (46.67%), Postives = 11/15 (73.33%), Query Frame = 3
Query:  651 SNKRWIPPLVRXLIY 695
            +NK+WIPP  +  +Y
Sbjct:  125 ANKKWIPPPGKGTLY 139          
BLAST of FC868844 vs. ExPASy Swiss-Prot
Match: ILVE_HELPJ (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori J99 GN=ilvE PE=3 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.779e-21
Identity = 51/109 (46.79%), Postives = 70/109 (64.22%), Query Frame = 1
Query:  328 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLA 654
            L ++DW NLGF +  TD+ ++    ++G++S+GEL     ++LS  S VL+YGQ  FEGLKAYR Q G  LLFRP ENA R+Q   ER+ MP  S E F++A    + A
Sbjct:    4 LENLDWKNLGFSYIKTDFRFIATY-KNGSWSQGELVSENALQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLKACAEVIKA 111          
BLAST of FC868844 vs. ExPASy Swiss-Prot
Match: ILVE_HAEIN (Branched-chain-amino-acid aminotransferase OS=Haemophilus influenzae GN=ilvE PE=3 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 3.364e-20
Identity = 50/109 (45.87%), Postives = 68/109 (62.39%), Query Frame = 1
Query:  328 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLA 654
            + D+DW+NLGF +  TDY ++    +DG + +G+L     + +   S  L+YGQ  FEGLKAYR +DG+I LFRP+ NA RMQ  A+R+ MP    E FV A K  V A
Sbjct:    1 MKDLDWNNLGFSYIKTDYRFIAHW-KDGKWDEGKLTTDSTLHIHEGSTALHYGQQCFEGLKAYRCKDGSINLFRPQANAERMQRTADRLLMPRVPTELFVRACKEVVKA 108          
BLAST of FC868844 vs. ExPASy Swiss-Prot
Match: ILVE_HELPY (Branched-chain-amino-acid aminotransferase OS=Helicobacter pylori GN=ilvE PE=3 SV=1)

HSP 1 Score: 98.2117 bits (243), Expect = 4.394e-20
Identity = 51/109 (46.79%), Postives = 68/109 (62.39%), Query Frame = 1
Query:  328 LADIDWDNLGFGFCPTDYMYVMKCGRDGNFSKGELQRFGNIELSPSSGVLNYGQGLFEGLKAYRKQDGNILLFRPEENAMRMQVGAERMCMPSPSVEQFVEAVKATVLA 654
            L ++DW NLGF +  TD+ ++    ++G++S+G L     ++LS  S VL+YGQ  FEGLKAYR Q G  LLFRP ENA R+Q   ER+ MP  S E F+ A    V A
Sbjct:    4 LENLDWKNLGFSYIKTDFRFIATY-KNGSWSQGGLVSENMLQLSEGSPVLHYGQACFEGLKAYRSQKGKALLFRPLENAKRLQTSCERLLMPKVSEELFLRACAEVVKA 111          
The following BLAST results are available for this feature:
BLAST of FC868844 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
BCAT5_ARATH2.760e-5255.00Branched-chain-amino-acid aminotransferase 5, chlo... [more]
BCAT3_ARATH8.659e-5155.72Branched-chain-amino-acid aminotransferase 3, chlo... [more]
BCAT2_ARATH2.165e-4270.37Branched-chain-amino-acid aminotransferase 2, chlo... [more]
BCAT1_ARATH3.980e-4152.60Branched-chain-amino-acid aminotransferase 1, mito... [more]
BCAT7_ARATH2.319e-3764.55Putative branched-chain-amino-acid aminotransferas... [more]
BCAT6_ARATH3.103e-3456.41Branched-chain-amino-acid aminotransferase 6 OS=Ar... [more]
BCAT4_ARATH1.117e-3053.70Probable branched-chain-amino-acid aminotransferas... [more]
ILVE_HELPJ6.779e-2146.79Branched-chain-amino-acid aminotransferase OS=Heli... [more]
ILVE_HAEIN3.364e-2045.87Branched-chain-amino-acid aminotransferase OS=Haem... [more]
ILVE_HELPY4.394e-2046.79Branched-chain-amino-acid aminotransferase OS=Heli... [more]

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Properties
Property NameValue
Genbank descriptionC31005E06EF AbioticL1 Citrus clementina cDNA clone C31005E06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868844 ID=FC868844; Name=FC868844; organism=Citrus clementina; type=EST; length=695bp
GAAGGACTTTAACAATAAAGGAAACATCAGGAACCCAGCTTCCACAGAGA
AGGAGATATGGAGAGAAGCAGCAGCGCAGTAATGGCTGGCCTTCAGCCGA
ATAGCCTAATCTGTCCTTTCGCTTCTTCACGTAATGGTTGTACGCTCTTC
CTCCCCATTCCCAATTCCTTCTCCTCCGCCGCCGGACAAAGCCGTCATTG
CCTTCCTCCCTTATCTCTCAAGCTTCAAAAGCAAACTGCTTTCACTCCTT
ACCATGTGAACCAAACGGACTCTCCTTTCAAGCTTTTTTCCGTTTCATCT
CATACTCTCAGCAATGAAACGATTCAATTAGCCGACATAGATTGGGACAA
CCTTGGATTTGGGTTTTGTCCTACTGATTATATGTACGTCATGAAATGTG
GAAGAGATGGAAACTTCTCTAAAGGTGAATTACAGCGTTTTGGTAACATT
GAGTTGAGTCCATCCTCTGGAGTCTTAAATTATGGCCAGGGATTATTCGA
AGGCCTGAAAGCCTACAGGAAACAAGATGGTAACATTCTTCTCTTTCGTC
CTGAGGAAAATGCAATGCGGATGCAGGTGGGTGCGGAGCGGATGTGCATG
CCATCACCATCAGTTGAACAGTTTGTGGAAGCTGTTAAGGCTACTGTTTT
AGCAACAAACGTTGGATCCCTCCTCTGGTAAGGNTCCTTATATAT
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