FC868866

Overview
NameFC868866
Unique NameFC868866
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868866 vs. ExPASy Swiss-Prot
Match: FENR1_TOBAC (Ferredoxin--NADP reductase, leaf-type isozyme, chloroplastic OS=Nicotiana tabacum GN=PETH PE=2 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 9.607e-93
Identity = 166/206 (80.58%), Postives = 177/206 (85.92%), Query Frame = 2
Query:   41 AVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 658
            AVSAAV               IIS D+I F KVP YY++VS G R+VS+RAQVTTEAPAKVEK SKK +EGVIVNKF+PK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIGVIADGVD N KPHKLRLYS ASSALGDFGDSKTVSLCVKRLVYTN+ GE VKGVCSNFLCDLKPGAEVKITGPVGKEMLMP+DP
Sbjct:    4 AVSAAVSLPSSKSTSFSSRTSIISTDKINFNKVPLYYRNVSGGSRLVSIRAQVTTEAPAKVEKISKKQDEGVIVNKFRPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGVIADGVDANGKPHKLRLYSTASSALGDFGDSKTVSLCVKRLVYTNDKGEEVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPKDP 209          

HSP 2 Score: 26.1794 bits (56), Expect = 9.607e-93
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 1
Query:  649 KGSHATVIMLATGTG 693
            K  +ATVIMLATGTG
Sbjct:  207 KDPNATVIMLATGTG 221          
BLAST of FC868866 vs. ExPASy Swiss-Prot
Match: FENR1_PEA (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Pisum sativum GN=PETH PE=1 SV=1)

HSP 1 Score: 318.161 bits (814), Expect = 5.686e-87
Identity = 153/207 (73.91%), Postives = 175/207 (84.54%), Query Frame = 2
Query:   38 AAVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 658
            AAV+AAV               I++P+R+ F+KV     +VS  GRV ++RAQVTTEAPAKV K SKK +E ++VNKFKPK PY+GRCLLNTKITGDDAPGETWHMVFSTEGEVPY+EGQSIG++ DG+DKN KPHKLRLYSIASSA+GDFGDSKTVSLCVKRLVYTN+ GE+VKGVCSNFLCDLKPG+EVKITGPVGKEMLMP+DP
Sbjct:    3 AAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSL--NNVSISGRVGTIRAQVTTEAPAKVVKHSKKQDENIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFSTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDP 207          

HSP 2 Score: 24.6386 bits (52), Expect = 5.686e-87
Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  649 KGSHATVIMLATGTG 693
            K  +ATVIML TGTG
Sbjct:  205 KDPNATVIMLGTGTG 219          
BLAST of FC868866 vs. ExPASy Swiss-Prot
Match: FENR_SPIOL (Ferredoxin--NADP reductase, chloroplastic OS=Spinacia oleracea GN=PETH PE=1 SV=1)

HSP 1 Score: 315.464 bits (807), Expect = 4.766e-86
Identity = 146/191 (76.44%), Postives = 171/191 (89.53%), Query Frame = 2
Query:  104 IISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTE------APAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 658
            +ISPD+I+++KVP YY++VS  G++  +RAQ+ ++      APAKVEK SKKMEEG+ VNKFKPKTPY+GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+GVI DG DKN KPHKLRLYSIASSALGDFGD+K+VSLCVKRL+YTN+ GE +KGVCSNFLCDLKPGAEVK+TGPVGKEMLMP+DP
Sbjct:   26 VISPDKISYKKVPLYYRNVSATGKMGPIRAQIASDVEAPPPAPAKVEKHSKKMEEGITVNKFKPKTPYVGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPDGEDKNGKPHKLRLYSIASSALGDFGDAKSVSLCVKRLIYTNDAGETIKGVCSNFLCDLKPGAEVKLTGPVGKEMLMPKDP 216          

HSP 2 Score: 24.2534 bits (51), Expect = 4.766e-86
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  649 KGSHATVIMLATGTG 693
            K  +AT+IML TGTG
Sbjct:  214 KDPNATIIMLGTGTG 228          
BLAST of FC868866 vs. ExPASy Swiss-Prot
Match: FENR_VICFA (Ferredoxin--NADP reductase, chloroplastic OS=Vicia faba GN=PETH PE=2 SV=1)

HSP 1 Score: 310.071 bits (793), Expect = 1.509e-84
Identity = 151/210 (71.90%), Postives = 174/210 (82.86%), Query Frame = 2
Query:   38 AAVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEAPA---KVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 658
            AAV+AAV               I++P+R+ F+KV      VS  GRV ++RAQ+TTEA A   KV K SKK +EG++VNKFKPK PY+GRCLLNTKITGDDAPGETWHMVF+TEGEVPY+EGQSIG++ DG+DKN KPHKLRLYSIASSA+GDFGDSKTVSLCVKRLVYTN+ GE+VKGVCSNFLCDLKPG+EVKITGPVGKEMLMP+DP
Sbjct:    3 AAVTAAVSLPYSNSTSLPIRTSIVAPERLVFKKVSL--NSVSISGRVGTIRAQITTEAEAPVTKVVKHSKKQDEGIVVNKFKPKEPYVGRCLLNTKITGDDAPGETWHMVFTTEGEVPYREGQSIGIVPDGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDAGEVVKGVCSNFLCDLKPGSEVKITGPVGKEMLMPKDP 210          

HSP 2 Score: 24.6386 bits (52), Expect = 1.509e-84
Identity = 11/15 (73.33%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  649 KGSHATVIMLATGTG 693
            K  +ATVIML TGTG
Sbjct:  208 KDPNATVIMLGTGTG 222          
BLAST of FC868866 vs. ExPASy Swiss-Prot
Match: FENR_MESCR (Ferredoxin--NADP reductase, chloroplastic OS=Mesembryanthemum crystallinum GN=PETH PE=2 SV=1)

HSP 1 Score: 307.375 bits (786), Expect = 4.368e-84
Identity = 146/187 (78.07%), Postives = 167/187 (89.30%), Query Frame = 2
Query:  104 IISPDRITFRKVPFYYKDVSTGGRVVSVRAQVT-TEAP-AKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 658
            +I+ ++I F KVP YY++VS GG+V ++RA  +  EAP AKVEK SKKMEEGVIVNK+KPK PY GRCLLNTKITGDDAPGETWHMVFS EGE+PY+EGQS+GVI +G+DKN KPHKLRLYSIAS  LGDFGDSKTVSLCVKRL+YTN+NGEIVKGVCSNFLCDLKPG+EV +TGPVGKEMLMP+DP
Sbjct:   26 VITHEKINFNKVPLYYRNVSVGGKVGTIRAVASDVEAPVAKVEKHSKKMEEGVIVNKYKPKNPYTGRCLLNTKITGDDAPGETWHMVFSHEGEIPYREGQSVGVIPEGIDKNGKPHKLRLYSIASRPLGDFGDSKTVSLCVKRLIYTNDNGEIVKGVCSNFLCDLKPGSEVVLTGPVGKEMLMPKDP 212          

HSP 2 Score: 25.7942 bits (55), Expect = 4.368e-84
Identity = 11/15 (73.33%), Postives = 13/15 (86.67%), Query Frame = 1
Query:  649 KGSHATVIMLATGTG 693
            K  +AT+IMLATGTG
Sbjct:  210 KDPNATIIMLATGTG 224          
BLAST of FC868866 vs. ExPASy Swiss-Prot
Match: FNRL1_ARATH (Ferredoxin--NADP reductase, leaf isozyme 1, chloroplastic OS=Arabidopsis thaliana GN=LFNR1 PE=1 SV=1)

HSP 1 Score: 300.056 bits (767), Expect = 1.971e-81
Identity = 151/211 (71.56%), Postives = 167/211 (79.15%), Query Frame = 2
Query:   38 AAVSAAVXXXXXXXXXXXXXXXIISPDRITFRKVPFYYKDVSTGGRVVSVRAQVTTEA----PAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 658
            AA+SAAV                +SP RI  +K    Y+      RVVSV+AQVTT+     P KV KESKK EEG++VNKFKPK PY GRCLLNTKITGDDAPGETWH+VF+TEGEVPY+EGQSIGVI +G+DKN KPHKLRLYSIASSA+GDFGDSKTVSLCVKRLVYTN+ GEIVKGVCSNFLCDLKPG E KITGPVGKEMLMP+DP
Sbjct:    3 AAISAAVSLPSSKSSSLLTKISSVSPQRIFLKKSTVCYR------RVVSVKAQVTTDTTEAPPVKVVKESKKQEEGIVVNKFKPKNPYTGRCLLNTKITGDDAPGETWHIVFTTEGEVPYREGQSIGVIPEGIDKNGKPHKLRLYSIASSAIGDFGDSKTVSLCVKRLVYTNDGGEIVKGVCSNFLCDLKPGDEAKITGPVGKEMLMPKDP 207          

HSP 2 Score: 24.2534 bits (51), Expect = 1.971e-81
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  649 KGSHATVIMLATGTG 693
            K  +AT+IML TGTG
Sbjct:  205 KDPNATIIMLGTGTG 219          
BLAST of FC868866 vs. ExPASy Swiss-Prot
Match: FNRL2_ARATH (Ferredoxin--NADP reductase, leaf isozyme 2, chloroplastic OS=Arabidopsis thaliana GN=LFNR2 PE=1 SV=1)

HSP 1 Score: 290.812 bits (743), Expect = 3.069e-79
Identity = 142/191 (74.35%), Postives = 165/191 (86.39%), Query Frame = 2
Query:  107 ISPDRITFRKVPFYYK--DVSTGGRVVSVRAQVTTEA----PAK-VEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 658
            I+P+RI F K  FYYK  +V TG RV S++AQ+TTE     PAK VEK SKK EEGVIVN+++PK PY G+CLLNTKIT DDAPGETWHMVFS +GE+PY+EGQS+GVIADG+DKN KPHK+RLYSIASSALGD G+S+TVSLCVKRLVYTN+ GE VKGVCSNFLCDL PG++VK+TGPVGKEMLMP+DP
Sbjct:   26 IAPERIRFTKGAFYYKSNNVVTGKRVFSIKAQITTETDTPTPAKKVEKVSKKNEEGVIVNRYRPKEPYTGKCLLNTKITADDAPGETWHMVFSHQGEIPYREGQSVGVIADGIDKNGKPHKVRLYSIASSALGDLGNSETVSLCVKRLVYTNDQGETVKGVCSNFLCDLAPGSDVKLTGPVGKEMLMPKDP 216          

HSP 2 Score: 26.1794 bits (56), Expect = 3.069e-79
Identity = 12/15 (80.00%), Postives = 13/15 (86.67%), Query Frame = 1
Query:  649 KGSHATVIMLATGTG 693
            K  +ATVIMLATGTG
Sbjct:  214 KDPNATVIMLATGTG 228          
BLAST of FC868866 vs. ExPASy Swiss-Prot
Match: FENR1_ORYSJ (Ferredoxin--NADP reductase, leaf isozyme, chloroplastic OS=Oryza sativa subsp. japonica GN=Os06g0107700 PE=2 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 6.805e-76
Identity = 136/169 (80.47%), Postives = 151/169 (89.35%), Query Frame = 2
Query:  173 RVVSVRAQVTTE-------APAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRDP 658
            R + +RAQV+T        APAK EK SKK +EGV+ NK++PK PY+G+CLLNTKIT DDAPGETWHMVFSTEGE+PY+EGQSIGVIADGVDKN KPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTN+ GEIVKGVCSNFLCDLKPG++VKITGPVGKEMLMP+DP
Sbjct:   41 RGLLLRAQVSTTDAAAVAAAPAKKEKISKKHDEGVVTNKYRPKEPYVGKCLLNTKITADDAPGETWHMVFSTEGEIPYREGQSIGVIADGVDKNGKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNDQGEIVKGVCSNFLCDLKPGSDVKITGPVGKEMLMPKDP 209          

HSP 2 Score: 23.8682 bits (50), Expect = 6.805e-76
Identity = 10/15 (66.67%), Postives = 12/15 (80.00%), Query Frame = 1
Query:  649 KGSHATVIMLATGTG 693
            K  +A +IMLATGTG
Sbjct:  207 KDPNANIIMLATGTG 221          
BLAST of FC868866 vs. ExPASy Swiss-Prot
Match: FENR_CYAPA (Ferredoxin--NADP reductase, cyanelle OS=Cyanophora paradoxa GN=PETH PE=1 SV=1)

HSP 1 Score: 196.823 bits (499), Expect = 1.538e-50
Identity = 95/163 (58.28%), Postives = 118/163 (72.39%), Query Frame = 2
Query:  173 RVVSVRAQVTTEAPAKVEKES--KKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFSTEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD 655
            + VS +   T E    +  ++   K +  + +N F+P  PYIG+C+ N +I G+ APGET H++F+ EG+VPY EGQSIG+I  G DK+ KPHKLRLYSIAS+  GDFGD KTVSL VKRL YT+ NG +VKGVCSN+LCDLKPG EV ITGPVG  MLMP D
Sbjct:   47 QAVSAKPATTFEVDTTIRAQAVDAKKKGDIPLNLFRPANPYIGKCIYNERIVGEGAPGETKHIIFTHEGKVPYLEGQSIGIIPPGTDKDGKPHKLRLYSIASTRHGDFGDDKTVSLSVKRLEYTDANGNLVKGVCSNYLCDLKPGDEVMITGPVGTTMLMPED 209          

HSP 2 Score: 24.2534 bits (51), Expect = 1.538e-50
Identity = 10/11 (90.91%), Postives = 11/11 (100.00%), Query Frame = 1
Query:  661 ATVIMLATGTG 693
            AT+IMLATGTG
Sbjct:  212 ATIIMLATGTG 222          
BLAST of FC868866 vs. ExPASy Swiss-Prot
Match: FENR_SYNY3 (Ferredoxin--NADP reductase OS=Synechocystis sp. (strain PCC 6803) GN=petH PE=1 SV=2)

HSP 1 Score: 161.384 bits (407), Expect = 2.863e-39
Identity = 83/165 (50.30%), Postives = 109/165 (66.06%), Query Frame = 2
Query:  164 TGGRVVSVRAQVTTEAPAKVEKESKKMEEGVIVNKFKPKTPYIGRCLLNTKITGDDAPGETWHMVFS-TEGEVPYKEGQSIGVIADGVDKNAKPHKLRLYSIASSALGDFGDSKTVSLCVKRLVYTNENGEIVKGVCSNFLCDLKPGAEVKITGPVGKEMLMPRD 655
            +G   V+  A  + +      KE K   + + VN ++PKTPYIG+ L N  +  + A G   H+ F  + G++ Y EGQSIG+I  G D   KPHKLRLYSIAS+  GDFGD KTVSLCV++L Y NE GE V+GVCS +LC++K G ++ ITGPVGKEML+P D
Sbjct:   97 SGSEAVANPAPESNKTMTTTPKEKKA--DDIPVNIYRPKTPYIGKVLENYPLVREGAIGTVQHLTFDLSAGDLRYLEGQSIGIIPPGEDDKGKPHKLRLYSIASTRHGDFGDDKTVSLCVRQLEYQNEAGETVQGVCSTYLCNIKEGDDIAITGPVGKEMLLPPD 259          

HSP 2 Score: 21.9422 bits (45), Expect = 2.863e-39
Identity = 8/11 (72.73%), Postives = 10/11 (90.91%), Query Frame = 1
Query:  661 ATVIMLATGTG 693
            A ++MLATGTG
Sbjct:  262 ANIVMLATGTG 272          
The following BLAST results are available for this feature:
BLAST of FC868866 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 24
Match NameE-valueIdentityDescription
FENR1_TOBAC9.607e-9380.58Ferredoxin--NADP reductase, leaf-type isozyme, chl... [more]
FENR1_PEA5.686e-8773.91Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_SPIOL4.766e-8676.44Ferredoxin--NADP reductase, chloroplastic OS=Spina... [more]
FENR_VICFA1.509e-8471.90Ferredoxin--NADP reductase, chloroplastic OS=Vicia... [more]
FENR_MESCR4.368e-8478.07Ferredoxin--NADP reductase, chloroplastic OS=Mesem... [more]
FNRL1_ARATH1.971e-8171.56Ferredoxin--NADP reductase, leaf isozyme 1, chloro... [more]
FNRL2_ARATH3.069e-7974.35Ferredoxin--NADP reductase, leaf isozyme 2, chloro... [more]
FENR1_ORYSJ6.805e-7680.47Ferredoxin--NADP reductase, leaf isozyme, chloropl... [more]
FENR_CYAPA1.538e-5058.28Ferredoxin--NADP reductase, cyanelle OS=Cyanophora... [more]
FENR_SYNY32.863e-3950.30Ferredoxin--NADP reductase OS=Synechocystis sp. (s... [more]

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Properties
Property NameValue
Genbank descriptionC31005G08EF AbioticL1 Citrus clementina cDNA clone C31005G08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868866 ID=FC868866; Name=FC868866; organism=Citrus clementina; type=EST; length=694bp
GATCTAAATTCTTCTTTATCATCACTTATCAATCATGGCTGCAGTGAGTG
CTGCAGTTTCTCTTCCGACTTCCAAGTCCACTTCGCTTCCAACCAGAACC
TCTATCATCTCTCCTGACAGAATCACCTTCAGAAAGGTTCCATTTTACTA
CAAAGATGTTTCAACTGGAGGGAGAGTGGTTTCTGTCAGAGCTCAGGTTA
CCACTGAGGCTCCTGCTAAGGTTGAGAAAGAGTCCAAGAAAATGGAGGAA
GGTGTTATTGTTAACAAGTTCAAACCTAAGACACCTTACATTGGCAGATG
CCTTTTAAACACTAAGATCACTGGTGATGATGCTCCTGGAGAGACCTGGC
ACATGGTCTTCAGCACTGAAGGAGAGGTTCCCTACAAAGAAGGGCAATCA
ATTGGGGTGATTGCAGATGGTGTTGACAAGAATGCGAAGCCTCACAAACT
GAGATTATACTCCATTGCTAGCAGTGCCCTTGGTGACTTTGGAGACTCCA
AAACTGTTTCTTTATGTGTGAAAAGGCTTGTGTACACCAACGAAAATGGA
GAAATTGTTAAGGGAGTCTGCTCAAATTTCTTGTGTGACTTGAAGCCTGG
GGCTGAAGTGAAAATTACAGGACCTGTTGGGAAAGAAATGCTCATGCCAA
GGGATCCCATGCTACAGTCATCATGCTTGCAACTGGAACTGGAA
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