FC868886

Overview
NameFC868886
Unique NameFC868886
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length601
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC868886 vs. ExPASy Swiss-Prot
Match: Y5162_ARATH (Uncharacterized protein At5g41620 OS=Arabidopsis thaliana GN=At5g41620 PE=1 SV=1)

HSP 1 Score: 222.246 bits (565), Expect = 1.534e-57
Identity = 115/199 (57.79%), Postives = 150/199 (75.38%), Query Frame = 1 
Query:    1 EMDDLMKLIAEDKLIRKSKEQDRIHAAIQSVRDELEDERKLRKRSESLHRKLARELSEVKSTLSNALRELEGERRSRKLLEELCDEFAIGIKDYDQELHALKQKS-DKNWTGKGEQDHLILHISESWLDERMQMKLEEAQYGLSEKNSIVDKLGFEIEAYLQAKRMSASKRTDNTIPRDRRNSLESVPLNEAVSAPQAV 594
            E+D ++K +AE+KL+ K+KE +R+ +A+QSVR  LEDERKLRKRSESLHRK+ARELSEVKS+LSN ++ELE   +S K++E LCDEFA GIK Y++E+H LK+K+ DK+W G+G  D L+LHI+ESWLDERMQM+LE       +  S++DKL  EIE +LQ KR        N IPR+RRNSLESVP N   + P+ V
Sbjct:  167 ELDSVVKQLAEEKLLSKNKEVERMSSAVQSVRKALEDERKLRKRSESLHRKMARELSEVKSSLSNCVKELERGSKSNKMMELLCDEFAKGIKSYEEEIHGLKKKNLDKDWAGRGGGDQLVLHIAESWLDERMQMRLEGGDTLNGKNRSVLDKLEVEIETFLQEKR--------NEIPRNRRNSLESVPFNTLSAPPRDV 357
The following BLAST results are available for this feature:
BLAST of FC868886 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y5162_ARATH1.534e-5757.79Uncharacterized protein At5g41620 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC31006A07EF AbioticL1 Citrus clementina cDNA clone C31006A07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868886 ID=FC868886; Name=FC868886; organism=Citrus clementina; type=EST; length=601bp
GAAATGGATGATTTGATGAAGCTCATTGCGGAAGATAAACTAATTAGGAA
GAGTAAAGAACAAGATCGGATCCATGCTGCTATACAGTCTGTGAGGGATG
AGCTAGAGGATGAGAGAAAATTAAGAAAAAGATCAGAGAGTCTACACAGA
AAGTTGGCTCGGGAGTTGTCTGAGGTTAAGTCTACTCTTTCTAATGCTTT
GAGAGAGCTGGAAGGAGAGAGAAGATCAAGGAAGCTGTTGGAAGAACTTT
GTGATGAATTTGCTATTGGCATAAAAGACTATGATCAGGAGCTGCATGCT
CTGAAACAGAAATCTGACAAGAATTGGACCGGGAAGGGTGAGCAGGATCA
TTTGATTCTCCATATATCAGAATCATGGCTTGATGAACGAATGCAGATGA
AGCTAGAAGAAGCTCAGTATGGTCTTTCTGAGAAGAATTCAATAGTGGAC
AAGTTGGGCTTTGAAATTGAGGCATACCTTCAGGCCAAACGAATGTCCGC
TTCTAAGAGAACTGATAATACGATCCCAAGGGATAGGCGAAATTCACTTG
AATCTGTCCCACTAAATGAGGCTGTGAGTGCGCCTCAAGCTGTTGGTGAT
G
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