FC868899
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_SYNY3 (MutS2 protein OS=Synechocystis sp. (strain PCC 6803) GN=mutSB PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 2.293e-34 Identity = 78/181 (43.09%), Postives = 104/181 (57.46%), Query Frame = 3 Query: 36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNI------------------XXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I + RV+ ITGPNTGGKT+ LKT+GL +MAK GL+I + E ++PWF + ADIGDE GH+ +I I DE+GAGT+P EG+AL ++LL A+ LT+ATTH+GELK LKY + FENA +EFD+ L P Y++LWG+ Sbjct: 337 IDSQIRVIAITGPNTGGKTVTLKTLGLVALMAKVGLYIPAKETVEMPWFAQILADIGDEQSLQQNLSTFSGHICRIIRILQALPSGVQDVLDPEIDSPNHPIFPSLVLLDEVGAGTDPTEGSALAIALLRHLADQ-PCLTVATTHYGELKALKYQDARFENASVEFDDQSLSPTYRLLWGI 516
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOTH (MutS2 protein OS=Clostridium thermocellum (strain ATCC 27405 / DSM 1237) GN=mutS2 PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 5.107e-34 Identity = 78/176 (44.32%), Postives = 104/176 (59.09%), Query Frame = 3 Query: 3 ILGKHCLFPI--FIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 +L K + PI +IG+ LV+TGPNTGGKT+ LKTVGL +M ++GLHI ++E K+ F ++ADIGDE H+K I I DE+GAGT+P EG AL MS+LE GS T+ATTH+ +LK + F ENAC EF+ L+P Y++L GV Sbjct: 311 LLDKKTVVPIDFWIGEDFNTLVVTGPNTGGKTVTLKTVGLFTLMTQAGLHIPANEGTKMSIFKKVYADIGDEQSIEQSLSTFSSHMKNIVGILKDVDEDSLVLFDELGAGTDPTEGAALAMSILEYLRNKGS-TTVATTHYSQLKAYAVTTKFVENACCEFNVETLRPTYRLLIGV 485
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_ALKOO (MutS2 protein OS=Alkaliphilus oremlandii (strain OhILAs) GN=mutS2 PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 6.671e-34 Identity = 79/180 (43.89%), Postives = 105/180 (58.33%), Query Frame = 3 Query: 9 GKHCLFP--------IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 G+H L P +++G+ LVITGPNTGGKT+ LKT+GL +MA+SGLH+ + K+ FD +FADIGDE H+ I NI DE+GAGT+P EG AL M++L + E G+ +T+ATTH+ ELK S + ENA +EFD L P YK+L GV Sbjct: 306 GRHPLLPSNKVVPNTMWLGEDFHTLVITGPNTGGKTVTLKTLGLLTLMAQSGLHVPADYGTKLAIFDQVFADIGDEQSIEQSLSTFSSHMTNIVNIMDNVTEQSLVLFDELGAGTDPTEGAALAMAILNSLREMGT-VTVATTHYSELKQYALSTEGVENASVEFDVNTLSPTYKLLIGV 484
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_HALOH (MutS2 protein OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=mutS2 PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 8.712e-34 Identity = 74/165 (44.85%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 I +G + + LVITGPNTGGKT+ LKTVGL V+M ++GLHI + E + F+ ++ADIGDE H+ +I DEIG GT+P EG ALG+++LE E G + TIATTH+ E+K+ YS D ENA +EFD L+P Y++L G+ Sbjct: 326 ITVGNEFKTLVITGPNTGGKTVALKTVGLFVLMVQAGLHIPAEEETVISIFNGVYADIGDEQSIEQNLSTFSSHINRIKRFLGKADARSLVLLDEIGVGTDPREGAALGVAILEHLRERG-VTTIATTHYSEIKSYAYSQDGVENASVEFDMETLQPTYRLLMGI 489
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_ALKMQ (MutS2 protein OS=Alkaliphilus metalliredigens (strain QYMF) GN=mutS2 PE=3 SV=1) HSP 1 Score: 142.124 bits (357), Expect = 1.486e-33 Identity = 75/165 (45.45%), Postives = 101/165 (61.21%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 ++IG+ + LVITGPNTGGKT+ LKT+GL MMA+SGLH+ + ++ FD +FADIGDE H+ I NI DE+GAGT+P EG ALGM++L E ++ T+ATTH+ ELK +N+ ENA +EFD L P Y++L GV Sbjct: 321 LWIGETFQTLVITGPNTGGKTVTLKTLGLLSMMAQSGLHVPADYGTRLAIFDQIFADIGDEQSIEQSLSTFSSHMTNIVNIVEEVTSNSLVLFDELGAGTDPTEGAALGMAILNHLREM-NVTTVATTHYSELKQYALTNEGVENASVEFDVATLSPTYRLLIGV 484
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_STRU0 (MutS2 protein OS=Streptococcus uberis (strain ATCC BAA-854 / 0140J) GN=mutS2 PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 2.803e-32 Identity = 73/157 (46.50%), Postives = 99/157 (63.06%), Query Frame = 3 Query: 54 VLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 V+VITGPNTGGKTI LKT+GLA +M +SGL IL+ E +K+ FD+++ADIGDE H+ I +I DE+GAGT+P EG +L M++LE + ++ T+ATTH+ ELK +D+ ENA MEFD LKP Y+ + GV Sbjct: 323 VIVITGPNTGGKTIMLKTLGLAQLMGQSGLPILADEGSKIAVFDAIYADIGDEQSIEQSLSTFSSHMTHIVDILEESNSNSLVLFDELGAGTDPQEGASLAMAILEQLRLT-NIKTMATTHYPELKAYGIESDYVENASMEFDSQSLKPTYRFMQGV 478
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_PELTS (MutS2 protein OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=mutS2 PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 3.660e-32 Identity = 74/164 (45.12%), Postives = 98/164 (59.76%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWG 521 I +G LVITGPNTGGKT+ LKT GL V+MA+SGLHI + E +++ F +FADIGDE H+ I I DE+GAGT+P EG AL S+LE +G+ T+ATTH+GELK + + ENA +EFD + L+P Y++L G Sbjct: 318 IRLGADFDTLVITGPNTGGKTVALKTAGLLVLMAQSGLHIPAGEGSRLGIFRQVFADIGDEQSIEQSLSTFSSHMNNIVEIIGKAGPDSLVLLDELGAGTDPAEGAALAQSILEKLHSAGA-KTVATTHYGELKDFALTRERVENASVEFDAITLRPTYRLLIG 480
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_SYMTH (MutS2 protein OS=Symbiobacterium thermophilum GN=mutS2 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 8.154e-32 Identity = 74/165 (44.85%), Postives = 98/165 (59.39%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 + IG LVITGPNTGGKT+ LKT+GL V+MA++GLH+ + +V F +F DIGDE GH+ I I DE+GAGT+P EG AL MS+LE + G+ T+ATTH+ ELKT Y+ ENA +EFD L+P +++L GV Sbjct: 316 VHIGITFDTLVITGPNTGGKTVALKTMGLFVLMAQAGLHLPAGHGTRVGVFQQVFVDIGDEQSIEQSLSTFSGHMTNIIRILDALEGPALVLLDELGAGTDPTEGAALAMSILEHLHKRGA-KTVATTHYSELKTYAYTRSRVENASVEFDVETLRPTFRLLIGV 479
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_BACSK (MutS2 protein OS=Bacillus clausii (strain KSM-K16) GN=mutS2 PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 1.391e-31 Identity = 72/163 (44.17%), Postives = 101/163 (61.96%), Query Frame = 3 Query: 36 IGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 IG + R LVITGPNTGGKT+ LKT+GL +MA+SGL + ++E ++ F+ +FADIGDE H+K I +I DE+GAGT+P EG AL +S+L+ + G+ L +ATTH+ ELK Y+ + NA +EFD L+P Y++L GV Sbjct: 324 IGDQVRSLVITGPNTGGKTVTLKTIGLLTLMAQSGLFVPAAEETELAVFEHIFADIGDEQSIEQSLSTFSSHMKNIVSILNEMNENSLILFDELGAGTDPTEGAALAISILDHVYKRGA-LAVATTHYSELKGYAYNREGALNASVEFDVETLRPTYRLLVGV 485
BLAST of FC868899 vs. ExPASy Swiss-Prot
Match: MUTS2_CLOK5 (MutS2 protein OS=Clostridium kluyveri (strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=mutS2 PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 1.817e-31 Identity = 73/165 (44.24%), Postives = 100/165 (60.61%), Query Frame = 3 Query: 30 IFIGQKTRVLVITGPNTGGKTICLKTVGLAVMMAKSGLHILSSEYAKVPWFDSLFADIGDEXXXXXXXXXXXGHLKQIGNIXXXXXXXXXXXXDEIGAGTNPLEGTALGMSLLEAFAESGSLLTIATTHHGELKTLKYSNDFFENACMEFDEVKLKPAYKILWGV 524 +++G+ LVITGPNTGGKT+ LKT+GL +MA SGL I + E + V +F +FADIGDE H+ I NI DE+GAGT+P EG AL +S+LE + GS++ +ATTH+ ELK ++ ENA +EFD LKP YK++ G+ Sbjct: 319 VYMGKDFTCLVITGPNTGGKTVALKTMGLLHIMALSGLMIPARENSTVGFFTEIFADIGDEQSIEQNLSTFSSHMTNIINIINNSDEKSLILFDELGAGTDPTEGAALAVSILENLKDRGSMI-VATTHYSELKAYALKSNGVENASVEFDVDTLKPTYKLMIGI 482 The following BLAST results are available for this feature:
BLAST of FC868899 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 187
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868899 ID=FC868899; Name=FC868899; organism=Citrus clementina; type=EST; length=526bpback to top |