FC868918
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RK15_PEA (50S ribosomal protein L15, chloroplastic (Fragment) OS=Pisum sativum GN=RPL15 PE=1 SV=1) HSP 1 Score: 230.72 bits (587), Expect = 5.720e-60 Identity = 123/193 (63.73%), Postives = 143/193 (74.09%), Query Frame = 2 Query: 80 VTANSLSFPSTPFKGNVKTLMPKPPSSLCVPLKVQQRNKPPQLTVLNQXXXXXXXXTVGSGPVTNVRFRLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 + +SL ++PFKGNVKTL+ KP LC LK+Q+ +++V+N+ + G NVRFRL+NLGPQPGS IAAGQG SCGFGMRGQKSRSGPG+ +GFEGGQMPLYRR+PKLRGIAGGMHAGLPKYV VNL DIE AGF +G+EVSLETLK K +INPSGRERKLP KIL DGE Sbjct: 7 IPVSSLPSLASPFKGNVKTLVAKP--CLCPCLKIQRTKL--RVSVVNKAASAYNVKSSGE----NVRFRLDNLGPQPGSRKRPKRKGRGIAAGQGASCGFGMRGQKSRSGPGIMRGFEGGQMPLYRRLPKLRGIAGGMHAGLPKYVNVNLTDIENAGFQDGEEVSLETLKAKRVINPSGRERKLPLKILADGE 191
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RK15_ARATH (50S ribosomal protein L15, chloroplastic OS=Arabidopsis thaliana GN=RPL15 PE=1 SV=2) HSP 1 Score: 216.853 bits (551), Expect = 8.548e-56 Identity = 117/193 (60.62%), Postives = 131/193 (67.88%), Query Frame = 2 Query: 95 LSFPSTPFKGNVKTLMPKPPSSLCVPLKVQQRNKPPQ-----LTVLNQXXXXXXXXTVGSGPVTNVRFRLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 L ST FKGNV L P L + L + + Q L V++Q S V RFRL+NLGPQPGS I+AGQG SCGFGMRGQKSRSGPG+ +GFEGGQ LYRR+PKLRGIAGGM +GLPKY+PVN+KDIE AGF EGDEVSLETLK+KGLINPSGRERKLP KILG GE Sbjct: 20 LHLSSTSFKGNVSVLGANPSQILSLKLNQTLKTRNQQQFARPLVVVSQTA------ATSSAVVAPERFRLDNLGPQPGSRKKQKRKGRGISAGQGASCGFGMRGQKSRSGPGIMRGFEGGQTALYRRLPKLRGIAGGMRSGLPKYLPVNIKDIETAGFQEGDEVSLETLKQKGLINPSGRERKLPLKILGTGE 206
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_SYNP6 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 / SAUG 1402/1) GN=rplO PE=3 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 5.592e-23 Identity = 65/128 (50.78%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 +L+NL PQPG+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L Y VN+ + AG G EV+LE+L G++ + P KILGDGE Sbjct: 2 KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGPLKILGDGE 117
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_SYNE7 (50S ribosomal protein L15 OS=Synechococcus elongatus (strain PCC 7942) GN=rplO PE=3 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.592e-23 Identity = 65/128 (50.78%), Postives = 77/128 (60.16%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPK---YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 +L+NL PQPG+ IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ H L Y VN+ + AG G EV+LE+L G++ + P KILGDGE Sbjct: 2 KLDNLAPQPGAKKRKRRVGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLK------HFPLINRKFYTVVNVGAL--AGLAAGTEVTLESLMAVGIVT----QNDGPLKILGDGE 117
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_SYNJA (50S ribosomal protein L15 OS=Synechococcus sp. (strain JA-3-3Ab) GN=rplO PE=3 SV=1) HSP 1 Score: 105.145 bits (261), Expect = 3.625e-22 Identity = 61/125 (48.80%), Postives = 75/125 (60.00%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 RL ++ PQPGS IAAGQG SCG GMRGQK+R G G R GFEGGQ PLYRR+PKL+ + P+Y +NL+ + A G EVSLE+L G++ + P KILGDGE Sbjct: 2 RLEDIRPQPGSTRRRRRLGRGIAAGQGASCGKGMRGQKARKGGGPRPGFEGGQTPLYRRLPKLKHFP--RYVRRPQYTLINLRAL--AKLPAGSEVSLESLMDLGIVTTNDG----PLKILGDGE 118
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_MICAN (50S ribosomal protein L15 OS=Microcystis aeruginosa (strain NIES-843) GN=rplO PE=3 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.069e-21 Identity = 58/125 (46.40%), Postives = 74/125 (59.20%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 +L+ + PQPGS ++AGQG SCG GMRGQKSRSG G R GFEGGQMPLYRR+PKL+ +Y VNL+ + A EV+LE+L K ++ + P K+LGDGE Sbjct: 2 KLHEIAPQPGSTKRRRRVGRGVSAGQGASCGLGMRGQKSRSGTGTRPGFEGGQMPLYRRVPKLKHFP---LVNPRQYTIVNLRKL--ASLPANTEVTLESLLKAKILTSNDG----PLKVLGDGE 117
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_CYAP7 (50S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 7424) GN=rplO PE=3 SV=1) HSP 1 Score: 100.138 bits (248), Expect = 1.166e-20 Identity = 60/124 (48.39%), Postives = 72/124 (58.06%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 L+ L PQ G+ I+AGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRRIPKL+ +Y +N+ + A EV+LETL GLI + P KILG+GE Sbjct: 3 LHELAPQKGATKRRRRVGRGISAGQGASCGFGMRGQKSRSGTGTKPGFEGGQMPLYRRIPKLKHFP---LVNRRQYTIINVGQL--ASLDPNSEVTLETLMDAGLITTNDG----PLKILGNGE 117
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_SYNP2 (50S ribosomal protein L15 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=rplO PE=3 SV=1) HSP 1 Score: 99.7525 bits (247), Expect = 1.523e-20 Identity = 58/125 (46.40%), Postives = 71/125 (56.80%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 +L+NL P+ GS IAAGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRR+PKL+ L D+ A EV+LE+L G++ + P K+LGDGE Sbjct: 2 KLSNLSPKAGSKKRRRRVGRGIAAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRVPKLKHFTIVNPKNFTIVNVGQLTDLPA-----NTEVTLESLMAAGIVTTNDG----PLKVLGDGE 117
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_PROM0 (50S ribosomal protein L15 OS=Prochlorococcus marinus (strain MIT 9301) GN=rplO PE=3 SV=1) HSP 1 Score: 98.9821 bits (245), Expect = 2.598e-20 Identity = 60/124 (48.39%), Postives = 73/124 (58.87%), Query Frame = 2 Query: 287 LNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGLPKYVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDGE 658 LN L GS IAAGQG SCGFGMRGQKSRSG R GFEGGQMPLYRR+PKL+ + +NL+ + F + D V+L++L KKGLI + K P KILG+G+ Sbjct: 5 LNTLKSNSGSRKKKLRKGRGIAAGQGASCGFGMRGQKSRSGRPTRPGFEGGQMPLYRRVPKLKHFE---IINQKNFSIINLEKLN--DFKDNDTVNLDSLVKKGLI----FKPKFPLKILGNGK 119
BLAST of FC868918 vs. ExPASy Swiss-Prot
Match: RL15_CYAP8 (50S ribosomal protein L15 OS=Cyanothece sp. (strain PCC 8801) GN=rplO PE=3 SV=1) HSP 1 Score: 98.5969 bits (244), Expect = 3.393e-20 Identity = 60/127 (47.24%), Postives = 78/127 (61.42%), Query Frame = 2 Query: 284 RLNNLGPQPGSXXXXXXXXXXIAAGQGNSCGFGMRGQKSRSGPGVRKGFEGGQMPLYRRIPKLRGIAGGMHAGL--PK-YVPVNLKDIEAAGFLEGDEVSLETLKKKGLINPSGRERKLPFKILGDG 655 R++ + P+ GS I+AGQG SCGFGMRGQKSRSG G + GFEGGQMPLYRRIPKL+ H L PK Y +N+ +E+ EV+LE+L ++G+I + P K+LGDG Sbjct: 2 RIHEVTPKEGSTKRRRRVGRGISAGQGASCGFGMRGQKSRSGTGTKAGFEGGQMPLYRRIPKLK------HFPLVNPKHYTIINVGKLES--LEPNTEVTLESLMEQGIITTNDG----PLKVLGDG 116 The following BLAST results are available for this feature:
BLAST of FC868918 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 408
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Sequences
The
following sequences are available for this feature:
EST sequence >FC868918 ID=FC868918; Name=FC868918; organism=Citrus clementina; type=EST; length=698bpback to top |