FC868926

Overview
NameFC868926
Unique NameFC868926
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length718
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9421 contig Ccv1_Contig9421:1..718. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC868926 vs. ExPASy Swiss-Prot
Match: GTO2_SCHPO (Glutathione S-transferase omega-like 2 OS=Schizosaccharomyces pombe GN=gto2 PE=2 SV=1)

HSP 1 Score: 137.117 bits (344), Expect = 9.004e-32
Identity = 81/179 (45.25%), Postives = 102/179 (56.98%), Query Frame = 2
Query:  191 DEVSETGSFTRTASTFRRFISRDPNSQFPAESGRYHLYISYACPWASRCLAYLKIKGLEKAISFTSVKPIWEQTKETDEHRGWVFPATNTEEPGAEPDPLNGAKTIRDLYELASTNYSGKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENAS---LDLHPSDQRDQIDGTNEW 718
            D  S+ G F R  S+FR  IS + +  F  E  RYHLY+SYACPWA R L   K+KGLE  I    V  +           GW F   N     +  DPL  +  +R+LY  A  NY+ +FTVPVLWD K  TIVNNESAEIIRMFN  FN++ E+     +DL+PS  R +ID  N++
Sbjct:    8 DWSSKDGEFRRQVSSFRERISPE-HKYFQPEKDRYHLYVSYACPWAHRTLIVRKLKGLENVIPVHVVGWLMGPN-------GWNFDKEND----STGDPLYNSPYLRNLYFRADPNYNMRFTVPVLWDSKYNTIVNNESAEIIRMFNDAFNEVIEDEEKRVVDLYPSSLRTKIDELNDY 174          
BLAST of FC868926 vs. ExPASy Swiss-Prot
Match: YQJG_ECOLI (Uncharacterized protein yqjG OS=Escherichia coli (strain K12) GN=yqjG PE=3 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 9.955e-31
Identity = 81/182 (44.51%), Postives = 101/182 (55.49%), Query Frame = 2
Query:  191 DEVSETGSFTRTASTFRRFISRDP------NSQFPAESGRYHLYISYACPWASRCLAYLKIKGLEKAISFTSVKPIWEQTKETDEHRGWVFPATNTEEPGAEPDPLNGAKTIRDLYELASTNYSGKFTVPVLWDKKLKTIVNNESAEIIRMFNTEFNDIAENASLDLHPSDQRDQIDGTNEW 718
            D  S  G F R+AS FR +++ D          F AE  RYHLY+S ACPWA R L   K+KGLE  IS + V P+  +        GW F   +   PGA  D L   + +  LY  A  +YSG+ TVPVLWDKK  TIV+NESAEIIRMFNT F+ +   A  D +P   + +ID  N W
Sbjct:   15 DTKSTGGKFQRSASAFRNWLTADGAPGPTGTGGFIAEKDRYHLYVSLACPWAHRTLIMRKLKGLEPFISVSVVNPLMLEN-------GWTF---DDSFPGATGDTLYQNEFLYQLYLHADPHYSGRVTVPVLWDKKNHTIVSNESAEIIRMFNTAFDALGAKAG-DYYPPALQTKIDELNGW 185          
BLAST of FC868926 vs. ExPASy Swiss-Prot
Match: GTO2_YEAST (Glutathione S-transferase omega-like 2 OS=Saccharomyces cerevisiae GN=ECM4 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 1.441e-21
Identity = 75/206 (36.41%), Postives = 99/206 (48.06%), Query Frame = 2
Query:  209 GSFTRTASTFRRFISRDPNSQFPAESGRYHLYISYACPWASRCLAYLKIKGL--------------EKAISFTSVKPIWEQTKETDEHRGWVFPATNTEEPG------------------AEPDPLNGAKTIRDLYELASTNYSGKFTVPVLWDKKLKTIVNNESAEIIRMFNT----EFNDIAENASLDLHPSDQRDQIDGTNEW 718
            G+F R  S+FR  IS+      PA+ GRY LY+S ACPWA R L    +KGL              EK   F  ++   E +++  EH   V     T +                    A  +P  G K I DLY  +   YS +FTVPVLWD + +TIVNNES+EIIR+ N+    EF D  ++   DL P+  + QID  N W
Sbjct:   11 GAFKRQVSSFRETISKQHPIYKPAK-GRYWLYVSLACPWAHRTLITRALKGLTSVIGCSVVHWHLDEKGWRFLDMEKQLEDSEDFLEHWHDVAGGIRTAKEDSSKSFAEIKNDSQRFMVDATNEPHYGYKRISDLYYKSDPQYSARFTVPVLWDLETQTIVNNESSEIIRILNSSAFDEFVD-DDHKKTDLVPAQLKTQIDDFNSW 214          
BLAST of FC868926 vs. ExPASy Swiss-Prot
Match: GTO3_YEAST (Glutathione S-transferase omega-like 3 OS=Saccharomyces cerevisiae GN=GTO3 PE=1 SV=1)

HSP 1 Score: 84.3445 bits (207), Expect = 6.926e-16
Identity = 68/199 (34.17%), Postives = 87/199 (43.72%), Query Frame = 2
Query:  215 FTRTASTFRRFISRDPNSQFPAESGRYHLYISYACPWASRCLAYLKIKGLEKAISFTSVK-----PIWEQTKETD---EHRGWVFPA-------TNTEEPGAE-------------PDPLNGAKTIRDLYELASTNYSGKFTVPVLWDKKLKTIVNNESAEIIRMFNT-EFNDIA--ENASLDLHPSDQRDQIDGTNEW 718
            F R +S FR  IS D     PA+ GRY LY++  CPWA R L    +KGL   I  +          W   +E D     R W   A        NT  P A               +P  G K + D Y     +Y G+FTVPVLWD +  TIVNNES++II + N+  F++    E   + L P     QI   N W
Sbjct:   13 FKRQSSPFREIISADHPIYKPAK-GRYWLYVALPCPWAQRTLITRALKGLAPIIGCSVAHWHLDDKGWRFLEEGDGKTNERHWFDIAGGISSVNLNTSTPVANIPNNAHRLLVDGTDEPHYGYKRLSDFYFKTKPDYKGRFTVPVLWDLETCTIVNNESSDIIGIMNSAAFDEFVGEEYRQVRLVPRSLEAQITEFNSW 210          
BLAST of FC868926 vs. ExPASy Swiss-Prot
Match: GTO1_YEAST (Glutathione S-transferase omega-like 1 OS=Saccharomyces cerevisiae GN=GTO1 PE=1 SV=1)

HSP 1 Score: 78.1814 bits (191), Expect = 4.964e-14
Identity = 59/188 (31.38%), Postives = 84/188 (44.68%), Query Frame = 2
Query:  263 NSQFPAESGRYHLYISYACPWASRCLAYLKIKGLEKAISFTSVKPIWEQTKE----------TDEHRGWVFPATN---------TEEPG------------AEPDPLNGAKTIRDLYELASTNYSG-KFTVPVLWDKKLKTIVNNESAEIIRMFNT----EFNDIAENASLDLHPSDQRDQIDGTNEW 718
            +S F  E GRY++Y +  CP+  R +    +K LE  +    V   W+   +           ++++   F AT          +EE G               DP+     + +LY L    Y G KFTVPVLWD K + IVNNES +IIR+ N+    EF    E   +DL P D  D+ID   +W
Sbjct:   13 HSVFKPEKGRYYIYGALGCPFTHRAILARSLKKLEPVLGL--VLSHWQLDSKGARFLPAPHRPEKYKERFFTATGGIASAKLDESEELGDVNNDSARLFVDGAFDPVENISRLSELYYLNDPKYPGTKFTVPVLWDSKTRKIVNNESGDIIRILNSGVFDEFIQSEETNVIDLVPHDLIDEIDKNIKW 198          
The following BLAST results are available for this feature:
BLAST of FC868926 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 5
Match NameE-valueIdentityDescription
GTO2_SCHPO9.004e-3245.25Glutathione S-transferase omega-like 2 OS=Schizosa... [more]
YQJG_ECOLI9.955e-3144.51Uncharacterized protein yqjG OS=Escherichia coli (... [more]
GTO2_YEAST1.441e-2136.41Glutathione S-transferase omega-like 2 OS=Saccharo... [more]
GTO3_YEAST6.926e-1634.17Glutathione S-transferase omega-like 3 OS=Saccharo... [more]
GTO1_YEAST4.964e-1431.38Glutathione S-transferase omega-like 1 OS=Saccharo... [more]
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Properties
Property NameValue
Genbank descriptionC31006F02EF AbioticL1 Citrus clementina cDNA clone C31006F02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868926 ID=FC868926; Name=FC868926; organism=Citrus clementina; type=EST; length=718bp
GAAATTGAACTTTGCTTCTTCACCAAATAAGCCACCCACCAAGCCACTAG
CCAGAAGGAGAAGCTTTAAGTCCAGCGAAGATGATAAAGTGATGATATTT
TTGTTTAGCAAAACCTTCTTTGCTAAGACCTCCTTCATTCTCTCTCTATT
CCCTTTCAAGCACTCTCGACAAATGGCTCGATCTGCTATTGATGAAGTTT
CAGAAACTGGTTCTTTTACAAGAACTGCTTCGACATTTCGTAGATTTATT
TCACGGGACCCGAATTCTCAGTTTCCGGCAGAATCTGGGAGGTATCATCT
GTATATATCCTATGCTTGCCCTTGGGCCTCCAGGTGTCTTGCATACTTGA
AGATCAAAGGACTTGAGAAAGCCATCAGTTTCACGTCAGTCAAACCCATT
TGGGAACAAACAAAAGAAACCGATGAGCATAGGGGATGGGTTTTTCCGGC
TACGAATACTGAGGAACCAGGAGCTGAGCCTGACCCTTTAAATGGAGCCA
AAACCATAAGAGACCTGTATGAGCTCGCAAGTACAAACTACTCAGGGAAG
TTCACTGTCCCCGTACTGTGGGATAAGAAGTTGAAGACGATTGTTAATAA
TGAGAGTGCGGAGATAATCCGCATGTTTAATACGGAATTCAATGATATAG
CTGAAAATGCTTCTCTGGATCTACATCCATCTGATCAGCGAGATCAAATT
GATGGGACTAATGAATGG
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