FC868954

Overview
NameFC868954
Unique NameFC868954
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length683
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC868954 vs. ExPASy Swiss-Prot
Match: PCS1_LOTJA (Glutathione gamma-glutamylcysteinyltransferase 1 OS=Lotus japonicus GN=PCS1 PE=2 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 9.540e-105
Identity = 171/206 (83.01%), Postives = 191/206 (92.72%), Query Frame = 3
Query:   60 MAMVALYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDA 677
            MAM  LYRR+LPSPPA+DFASS+GKQLFLEA+Q GTME FYRL+SYFQTQSEPA+CGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPL+K+K +GISFGKLVCLAHCAGAKVEAF  + S+ID FRKY+++CS S+DCHVISSYHR A KQTGTGHFSPIGGYHAG+DMALILDVARFKYPPHW+PLT LWE M+ VD++
Sbjct:    1 MAMAGLYRRLLPSPPAVDFASSQGKQLFLEAVQNGTMESFYRLVSYFQTQSEPAFCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLDKIKARGISFGKLVCLAHCAGAKVEAFHASHSSIDHFRKYVMKCSTSDDCHVISSYHREALKQTGTGHFSPIGGYHAGKDMALILDVARFKYPPHWIPLTHLWEGMNYVDES 206          
BLAST of FC868954 vs. ExPASy Swiss-Prot
Match: PCS1_ARATH (Glutathione gamma-glutamylcysteinyltransferase 1 OS=Arabidopsis thaliana GN=PCS1 PE=1 SV=1)

HSP 1 Score: 378.637 bits (971), Expect = 1.627e-104
Identity = 172/206 (83.50%), Postives = 195/206 (94.66%), Query Frame = 3
Query:   60 MAMVALYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDA 677
            MAM +LYRR LPSPPAIDF+S+EGK +F EA+Q GTMEGF+RLISYFQTQSEPAYCGLASLS+VLNAL+IDPGRKWKGPWRWFDESMLDCCEPLE VKEKGISFGK+VCLAHC+GAKVEAFRT+QSTIDDFRK++++C++SE+CH+IS+YHRG FKQTGTGHFSPIGGY+A RDMALILDVARFKYPPHWVPL LLWEAMD +D +
Sbjct:    1 MAMASLYRRSLPSPPAIDFSSAEGKLIFNEALQKGTMEGFFRLISYFQTQSEPAYCGLASLSVVLNALSIDPGRKWKGPWRWFDESMLDCCEPLEVVKEKGISFGKVVCLAHCSGAKVEAFRTSQSTIDDFRKFVVKCTSSENCHMISTYHRGVFKQTGTGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWEAMDSIDQS 206          
BLAST of FC868954 vs. ExPASy Swiss-Prot
Match: PCS1_WHEAT (Glutathione gamma-glutamylcysteinyltransferase 1 OS=Triticum aestivum GN=PCS1 PE=2 SV=1)

HSP 1 Score: 361.303 bits (926), Expect = 2.688e-99
Identity = 161/206 (78.16%), Postives = 190/206 (92.23%), Query Frame = 3
Query:   60 MAMVALYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDA 677
            M + +LYRR+LPSPPA++FAS+EGK+LF EA+QGGTMEGF+ LISYFQTQSEPA+CGLASLS+VLNALAIDPGR WKGPWRWFDESMLDCCEPL KVK +GI+FGK+VCLAHCAGA+V++FR +Q+TI DFR ++ RC++S+DCH+ISSYHR  FKQTGTGHFSPIGGYHA +DMALILDVARFKYPPHWVPLTLLW+AM+  D+A
Sbjct:    1 MEVASLYRRVLPSPPAVEFASAEGKRLFAEALQGGTMEGFFNLISYFQTQSEPAFCGLASLSVVLNALAIDPGRPWKGPWRWFDESMLDCCEPLHKVKAEGITFGKVVCLAHCAGARVQSFRADQTTIHDFRAHLTRCASSQDCHLISSYHRSPFKQTGTGHFSPIGGYHAEKDMALILDVARFKYPPHWVPLTLLWDAMNTTDEA 206          
BLAST of FC868954 vs. ExPASy Swiss-Prot
Match: PCS2_ARATH (Glutathione gamma-glutamylcysteinyltransferase 2 OS=Arabidopsis thaliana GN=PCS2 PE=2 SV=1)

HSP 1 Score: 358.607 bits (919), Expect = 1.743e-98
Identity = 166/206 (80.58%), Postives = 189/206 (91.75%), Query Frame = 3
Query:   60 MAMVALYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDA 677
            M+M +LYRR L SPPAIDFAS EGKQ+F EA+Q GTMEGF+ LISYFQTQSEPA+CGLASLSMVLN+L+IDPGRKWKGPWRWFDESML+CCEPLE VK+KGISFGK+VCLAH +GAKVEAFRTNQSTIDDFRKY+++CS S++CH+IS+YHR   KQTGTGHFSPIGGY+A RDMALILDVARFKYPPHWVPL LLW+AMD +D +
Sbjct:    1 MSMASLYRRSL-SPPAIDFASFEGKQIFNEALQKGTMEGFFGLISYFQTQSEPAFCGLASLSMVLNSLSIDPGRKWKGPWRWFDESMLECCEPLEIVKDKGISFGKVVCLAHSSGAKVEAFRTNQSTIDDFRKYVVKCSTSDNCHMISTYHRQVLKQTGTGHFSPIGGYNAERDMALILDVARFKYPPHWVPLKLLWDAMDSIDQS 205          
BLAST of FC868954 vs. ExPASy Swiss-Prot
Match: PCS2_LOTJA (Glutathione gamma-glutamylcysteinyltransferase 2 OS=Lotus japonicus GN=PCS2 PE=2 SV=2)

HSP 1 Score: 341.273 bits (874), Expect = 2.879e-93
Identity = 154/206 (74.76%), Postives = 180/206 (87.38%), Query Frame = 3
Query:   60 MAMVALYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDA 677
            MA V+LYRR+LPSPPAIDFAS EGK++F+EA+  GTMEGF++LIS++QTQSEPAYCGLA+LS+VLNALAIDPGRKWKGPWRWFD+SMLDCCEPLEKVK +GI+FGK+ CLA C GAKVEAFR+N+ST+ DFR  +I C +SED H I SYHR   KQTG GHFSP+GGYHA RDM LILDV R+KYPPHWVP+TLLW AM+ +D A
Sbjct:    1 MASVSLYRRVLPSPPAIDFASQEGKKIFVEALGQGTMEGFFKLISFYQTQSEPAYCGLATLSVVLNALAIDPGRKWKGPWRWFDDSMLDCCEPLEKVKVQGITFGKVACLARCNGAKVEAFRSNESTVSDFRNRVISCCSSEDRHAIVSYHRSGLKQTGEGHFSPLGGYHAERDMVLILDVTRYKYPPHWVPVTLLWNAMNTIDRA 206          
BLAST of FC868954 vs. ExPASy Swiss-Prot
Match: PCS3_LOTJA (Glutathione gamma-glutamylcysteinyltransferase 3 OS=Lotus japonicus GN=PCS3 PE=2 SV=1)

HSP 1 Score: 337.806 bits (865), Expect = 3.183e-92
Identity = 151/206 (73.30%), Postives = 179/206 (86.89%), Query Frame = 3
Query:   60 MAMVALYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDA 677
            MA   LYRR+LPSPPAIDFAS EGK++F+EA+  GTMEGF++L+SY+QTQSEPAYCGLA+L++VLNAL+IDPGRKWKGPWRWFD+SMLDCCEPLEK+K +GI+FGK+ CLA C GA VEAFR+N+ST+ DFR  +I C +SED H+I SYHR   KQTG GHFSPIGGYHA RDM LILDV R+KYPPHWVPLTLLW+AM+ +D A
Sbjct:    1 MASAGLYRRVLPSPPAIDFASPEGKKIFVEALGQGTMEGFFKLVSYYQTQSEPAYCGLATLTVVLNALSIDPGRKWKGPWRWFDDSMLDCCEPLEKIKVQGITFGKVACLARCNGAHVEAFRSNESTVSDFRDRVISCCSSEDRHLIVSYHRSGLKQTGEGHFSPIGGYHAERDMVLILDVTRYKYPPHWVPLTLLWDAMNTIDRA 206          
BLAST of FC868954 vs. ExPASy Swiss-Prot
Match: PCS_SCHPO (Glutathione gamma-glutamylcysteinyltransferase OS=Schizosaccharomyces pombe GN=SPAC3H1.10 PE=2 SV=1)

HSP 1 Score: 196.052 bits (497), Expect = 1.496e-49
Identity = 92/203 (45.32%), Postives = 130/203 (64.04%), Query Frame = 3
Query:   72 ALYRRMLPSPPAIDFASSEGKQLFLEAIQGGTMEGFYRLISYFQTQSEPAYCGLASLSMVLNALAIDPGRKWKGPWRWFDESMLDCCEPLEKVKEKGISFGKLVCLAHCAGAKVEAFRTNQSTIDDFRKYIIRCSASEDCHVISSYHRGAFKQTGTGHFSPIGGYHAGRDMALILDVARFKYPPHWVPLTLLWEAMDRVDDAN 680
            + Y+R LP    + F SS GK +FL A+Q G ME ++ L     TQ+EPA+CGL +L M+LN+L +DPGR WKG WRW+D+ MLDCC  L  +++ G++  +  CLA+C G +         + D+FRK +I CS  E+  +  S+ R    QTG GHFSP+GG+    +  LILDVARFKYP +WV L L++E+M  +D A+
Sbjct:   41 SFYKRQLPKQ-CLAFDSSLGKDVFLRALQEGRMENYFSLAQQMVTQNEPAFCGLGTLCMILNSLKVDPGRLWKGSWRWYDQYMLDCCRSLSDIEKDGVTLEEFSCLANCNGLRTITKCVKDVSFDEFRKDVISCSTIENKIMAISFCRKVLGQTGDGHFSPVGGFSESDNKILILDVARFKYPCYWVDLKLMYESMFPIDKAS 242          
The following BLAST results are available for this feature:
BLAST of FC868954 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
PCS1_LOTJA9.540e-10583.01Glutathione gamma-glutamylcysteinyltransferase 1 O... [more]
PCS1_ARATH1.627e-10483.50Glutathione gamma-glutamylcysteinyltransferase 1 O... [more]
PCS1_WHEAT2.688e-9978.16Glutathione gamma-glutamylcysteinyltransferase 1 O... [more]
PCS2_ARATH1.743e-9880.58Glutathione gamma-glutamylcysteinyltransferase 2 O... [more]
PCS2_LOTJA2.879e-9374.76Glutathione gamma-glutamylcysteinyltransferase 2 O... [more]
PCS3_LOTJA3.183e-9273.30Glutathione gamma-glutamylcysteinyltransferase 3 O... [more]
PCS_SCHPO1.496e-4945.32Glutathione gamma-glutamylcysteinyltransferase OS=... [more]
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Properties
Property NameValue
Genbank descriptionC31006H12EF AbioticL1 Citrus clementina cDNA clone C31006H12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC868954 ID=FC868954; Name=FC868954; organism=Citrus clementina; type=EST; length=683bp
TTTCTTTGCTTTCCACAGAGAAGAGAATAACACTTTAATCGCAGAAACTT
AAAAAGAAAATGGCGATGGTTGCTTTGTATCGACGGATGCTTCCTTCTCC
TCCTGCAATTGATTTCGCTTCTTCTGAAGGAAAGCAACTTTTCCTCGAGG
CCATTCAAGGCGGAACAATGGAAGGTTTCTATAGGCTAATTTCTTATTTT
CAGACACAATCAGAGCCTGCGTATTGTGGATTGGCTAGCCTTTCCATGGT
CTTGAATGCACTTGCCATTGACCCTGGAAGAAAATGGAAGGGACCATGGA
GGTGGTTTGATGAATCTATGCTCGACTGTTGTGAACCCTTGGAAAAGGTT
AAAGAGAAAGGTATCTCATTTGGTAAGCTTGTTTGTTTGGCTCACTGTGC
TGGTGCAAAGGTAGAAGCTTTCCGAACAAATCAAAGTACCATTGATGATT
TCCGGAAGTATATAATTCGGTGTTCTGCCTCTGAAGATTGTCATGTGATC
TCATCATATCATAGAGGGGCTTTTAAACAGACTGGAACAGGGCATTTTTC
ACCCATTGGTGGTTATCATGCTGGAAGGGACATGGCACTAATTTTAGATG
TTGCACGTTTTAAGTATCCTCCACACTGGGTTCCACTTACGCTTCTTTGG
GAAGCCATGGATAGAGTTGATGACGCAAACTGG
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