FC869004

Overview
NameFC869004
Unique NameFC869004
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length557
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig2195 contig Ccv1_Contig2195:1..554. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869004 vs. ExPASy Swiss-Prot
Match: GSTX4_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 261.536 bits (667), Expect = 1.931e-69
Identity = 120/170 (70.59%), Postives = 140/170 (82.35%), Query Frame = 1
Query:   46 DEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCEPPIIVQYIDEVWKDKAP-LLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGAKPFFGGDNFGYVDLSLIPFYCWFYTYETCG 552
            +EV+LLDFWPSMFG+R+RIALAEK +KYEYKEEDL+NKSPLLLQMNP+HKKIPVLIHNG+P+CE  I V+YI+EVWKDKAP LLPSDPY RAQARFW D+IDKK+YD  RK WTTKG             LK LEG LG KP+FGG++FG+VD++LI +Y WFY YET G
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEIKYEYKEEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPNLLPSDPYDRAQARFWADYIDKKLYDFGRKLWTTKGEEQEAAKKDFIECLKVLEGALGDKPYFGGESFGFVDIALIGYYSWFYAYETFG 173          
BLAST of FC869004 vs. ExPASy Swiss-Prot
Match: GSTXC_TOBAC (Probable glutathione S-transferase parC OS=Nicotiana tabacum GN=PARC PE=2 SV=1)

HSP 1 Score: 258.455 bits (659), Expect = 1.635e-68
Identity = 118/170 (69.41%), Postives = 139/170 (81.76%), Query Frame = 1
Query:   46 DEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCEPPIIVQYIDEVWKDKAP-LLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGAKPFFGGDNFGYVDLSLIPFYCWFYTYETCG 552
            +EV+LLDFWPSMFG+R+RIALAEK +KYEYK+EDL+NKSPLLLQMNP+HKKIPVLIHNG+P+CE  I V+YI+EVWKDKAP LLPSDPY RAQARFW D+IDKK+YD  RK W TKG             LK LEG LG +P+FGG++FG+VD++LI FY WFY YET G
Sbjct:    4 EEVILLDFWPSMFGMRLRIALAEKEIKYEYKQEDLRNKSPLLLQMNPIHKKIPVLIHNGKPICESIIAVEYIEEVWKDKAPSLLPSDPYDRAQARFWADYIDKKLYDFGRKLWATKGEEQEAAKKDFIECLKVLEGALGDRPYFGGESFGFVDIALIGFYSWFYAYETFG 173          
BLAST of FC869004 vs. ExPASy Swiss-Prot
Match: GSTX3_SOYBN (Glutathione S-transferase 3 OS=Glycine max GN=GST3 PE=1 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 7.594e-66
Identity = 115/171 (67.25%), Postives = 136/171 (79.53%), Query Frame = 1
Query:   40 MADEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCEPPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGAKPFFGGDNFGYVDLSLIPFYCWFYTYETCG 552
            M+DEVVLLD W SM+G+R RIALAEKGV+YEYKEE+L N+SPLLLQMNP+HKKIPVLIHNG+P+CE  IIVQYIDEVW DK+PL+PSDPY+R+QARFWVD+IDKK+YD+ +K W +KG            + K LE  L  KPF+G D FG+VDL LI F  WFYTYET G
Sbjct:    1 MSDEVVLLDTWASMYGMRARIALAEKGVRYEYKEENLMNRSPLLLQMNPIHKKIPVLIHNGKPICESAIIVQYIDEVWNDKSPLMPSDPYKRSQARFWVDYIDKKIYDTWKKMWLSKGEEHEEGKKELISIFKQLEETLTDKPFYGDDTFGFVDLCLITFSSWFYTYETYG 171          
BLAST of FC869004 vs. ExPASy Swiss-Prot
Match: GSTXA_TOBAC (Probable glutathione S-transferase parA OS=Nicotiana tabacum GN=PARA PE=2 SV=1)

HSP 1 Score: 241.891 bits (616), Expect = 1.583e-63
Identity = 107/169 (63.31%), Postives = 135/169 (79.88%), Query Frame = 1
Query:   43 ADEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCEPPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGAKPFFGGDNFGYVDLSLIPFYCWFYTYETC 549
            ++ VVLLDFWPS FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+LIHN + +CE   I++YIDEVW DK PLLPSDPY+R+QARFW D+IDKK+Y + R+ W+ KG            +LKTLEG+LG K +FGGDN G+VD++L+PF  WFY+YETC
Sbjct:    3 SNNVVLLDFWPSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNSKAICESLNILEYIDEVWHDKCPLLPSDPYERSQARFWADYIDKKIYSTGRRVWSGKGEDQEEAKKEFIEILKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETC 171          
BLAST of FC869004 vs. ExPASy Swiss-Prot
Match: GSTX1_NICPL (Probable glutathione S-transferase MSR-1 OS=Nicotiana plumbaginifolia GN=MSR-1 PE=2 SV=1)

HSP 1 Score: 232.646 bits (592), Expect = 9.607e-61
Identity = 104/169 (61.54%), Postives = 133/169 (78.70%), Query Frame = 1
Query:   43 ADEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCEPPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGAKPFFGGDNFGYVDLSLIPFYCWFYTYETC 549
            ++ VVLLDF  S FG+R+RIALA KG+KYE KEE+L +KSPLLL+MNPVHKKIP+LIHNG+P+CE   I++YIDEVW +K PLLPSDPYQR+QARFW ++ID K+Y + R+ W+ KG            + KTLEG+LG K +FGGDN G+VD++L+PF  WFY+YETC
Sbjct:    3 SNNVVLLDFSGSSFGMRLRIALALKGIKYEAKEENLSDKSPLLLEMNPVHKKIPILIHNGKPICESLNILEYIDEVWHEKCPLLPSDPYQRSQARFWANYIDNKIYSTGRRVWSGKGEDQEEAKKEFIEIFKTLEGELGNKTYFGGDNLGFVDVALVPFTSWFYSYETC 171          
BLAST of FC869004 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSJ (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. japonica GN=GSTU1 PE=1 SV=1)

HSP 1 Score: 186.422 bits (472), Expect = 7.895e-47
Identity = 90/178 (50.56%), Postives = 118/178 (66.29%), Query Frame = 1
Query:   49 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCEPPIIVQYIDEVWKDKAPLLP-------SDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGAKPFF---GGDNFGYVDLSLIPFYCWFYTYETCG 552
            E+VLLDFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL+H GRPV E  +I+QY+D+ +     LLP          Y RA ARFW D++D+K+YD   + W  KG            +L+TLE +LG + FF   GG   G+VD++L+PF  WFY+YE CG
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLPPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCG 183          
BLAST of FC869004 vs. ExPASy Swiss-Prot
Match: GSTU1_ORYSI (Probable glutathione S-transferase GSTU1 OS=Oryza sativa subsp. indica GN=GSTU1 PE=2 SV=1)

HSP 1 Score: 183.726 bits (465), Expect = 5.118e-46
Identity = 90/178 (50.56%), Postives = 120/178 (67.42%), Query Frame = 1
Query:   49 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCEPPIIVQYIDEVWKDKAPLL-PSD------PYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGAKPFF---GGDNFGYVDLSLIPFYCWFYTYETCG 552
            E+VLLDFW S FG R RIA+AEKG+++EY+EEDL NKS LLL+ NPVH+KIPVL+H GRPV E  +I+QY+D+ +     LL P++       Y RA ARFW D++D+K+YD   + W  KG            +L+TLE +LG + FF   GG   G+VD++L+PF  WFY+YE CG
Sbjct:    6 ELVLLDFWVSPFGQRCRIAMAEKGLEFEYREEDLGNKSDLLLRSNPVHRKIPVLLHAGRPVSESLVILQYLDDAFPGTPHLLSPANSGDADAAYARATARFWADYVDRKLYDCGSRLWRLKGEPQAAAGREMAEILRTLEAELGDREFFGGGGGGRLGFVDVALVPFTAWFYSYERCG 183          
BLAST of FC869004 vs. ExPASy Swiss-Prot
Match: GSTX2_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.933e-35
Identity = 80/165 (48.48%), Postives = 101/165 (61.21%), Query Frame = 1
Query:   49 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCEPPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGAKPFFGGDNFGYVDLSLIPFYCWFYTYE 543
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NPV+KK+PVLIHNG+P+ E  II++YIDE ++  + +LP DPY RA ARFW  F+D K+  +   T+  KG            +LK L+ +L  K FF GD FG+ D++      W   +E
Sbjct:    3 EVKLLGFWYSPFSHRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPVYKKVPVLIHNGKPIVESMIILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-AAVVNTFFRKGEEQEKGKEEVYEMLKVLDNELKDKKFFAGDKFGFADIAANLVGFWLGVFE 165          
BLAST of FC869004 vs. ExPASy Swiss-Prot
Match: GSTX1_TOBAC (Probable glutathione S-transferase OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 146.747 bits (369), Expect = 6.933e-35
Identity = 79/165 (47.88%), Postives = 101/165 (61.21%), Query Frame = 1
Query:   49 EVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCEPPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDSSRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGAKPFFGGDNFGYVDLSLIPFYCWFYTYE 543
            EV LL FW S F  RV  AL  KGVKYEY EED  NKS LLLQ NP+HKK+PVLIHNG+ + E  +I++YIDE ++  + +LP DPY RA ARFW  F+D K+  +  KT+  KG            +LK L+ +L  K FF GD FG+ D++      W   +E
Sbjct:    3 EVKLLGFWYSPFSRRVEWALKIKGVKYEYIEEDRDNKSSLLLQSNPIHKKVPVLIHNGKRIVESMVILEYIDETFEGPS-ILPKDPYDRALARFWAKFLDDKV-PAVVKTFLRKGEEQEKDKEEVCEMLKVLDNELKDKKFFVGDKFGFADIAANLVAFWLGVFE 165          
BLAST of FC869004 vs. ExPASy Swiss-Prot
Match: GSTX6_SOYBN (Probable glutathione S-transferase OS=Glycine max GN=HSP26-A PE=2 SV=1)

HSP 1 Score: 146.362 bits (368), Expect = 9.054e-35
Identity = 77/167 (46.11%), Postives = 105/167 (62.87%), Query Frame = 1
Query:   46 DEVVLLDFWPSMFGIRVRIALAEKGVKYEYKEEDLKNKSPLLLQMNPVHKKIPVLIHNGRPVCEPPIIVQYIDEVWKDKAPLLPSDPYQRAQARFWVDFIDKKMYDS-SRKTWTTKGXXXXXXXXXXXXVLKTLEGQLGAKPFFGGDNFGYVDLSLIPFYCWFYTYE 543
            ++V LL    S F  RV+IAL  KGV+Y++ EE+L NKS LLL+ NPVHKK+PV +HN +P+ E  +IV+YIDE WK+  P+LPSDPYQRA ARFW  FID K+  + S+  +T                L+ LE +L  K FFGG+ FG VD++ +    W   ++
Sbjct:    6 EDVKLLGIVGSPFVCRVQIALKLKGVEYKFLEENLGNKSDLLLKYNPVHKKVPVFVHNEQPIAESLVIVEYIDETWKNN-PILPSDPYQRALARFWSKFIDDKIVGAVSKSVFTVDEKEREKNVEETYEALQFLENELKDKKFFGGEEFGLVDIAAVFIAFWIPIFQ 171          
The following BLAST results are available for this feature:
BLAST of FC869004 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 16
Match NameE-valueIdentityDescription
GSTX4_TOBAC1.931e-6970.59Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTXC_TOBAC1.635e-6869.41Probable glutathione S-transferase parC OS=Nicotia... [more]
GSTX3_SOYBN7.594e-6667.25Glutathione S-transferase 3 OS=Glycine max GN=GST3... [more]
GSTXA_TOBAC1.583e-6363.31Probable glutathione S-transferase parA OS=Nicotia... [more]
GSTX1_NICPL9.607e-6161.54Probable glutathione S-transferase MSR-1 OS=Nicoti... [more]
GSTU1_ORYSJ7.895e-4750.56Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTU1_ORYSI5.118e-4650.56Probable glutathione S-transferase GSTU1 OS=Oryza ... [more]
GSTX2_TOBAC6.933e-3548.48Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX1_TOBAC6.933e-3547.88Probable glutathione S-transferase OS=Nicotiana ta... [more]
GSTX6_SOYBN9.054e-3546.11Probable glutathione S-transferase OS=Glycine max ... [more]

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Properties
Property NameValue
Genbank descriptionC31007E03EF AbioticL1 Citrus clementina cDNA clone C31007E03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869004 ID=FC869004; Name=FC869004; organism=Citrus clementina; type=EST; length=557bp
TCATTTTCTACTCTTGACTCTTAGTAAGCTTCTGTCACAATGGCGGACGA
AGTGGTTCTGTTGGACTTCTGGCCCAGCATGTTTGGGATAAGGGTCAGGA
TTGCTCTGGCGGAGAAAGGCGTCAAGTATGAGTACAAGGAAGAGGACTTG
AAGAACAAGAGCCCCCTGCTTCTGCAGATGAACCCCGTTCACAAGAAGAT
CCCGGTTCTCATCCACAACGGCAGACCGGTCTGTGAGCCACCCATCATTG
TTCAGTACATTGATGAAGTGTGGAAGGACAAGGCTCCATTGCTTCCCTCT
GATCCCTACCAGAGAGCTCAAGCTAGGTTCTGGGTAGATTTCATTGACAA
GAAGATGTACGATTCTTCGAGGAAGACATGGACCACAAAGGGAGAAGAGC
AGGAGGCAGCTAAGAAGGAGTTCTTTGAAGTTCTGAAGACTTTGGAAGGG
CAGCTTGGAGCCAAGCCTTTCTTTGGAGGAGACAATTTTGGGTATGTGGA
TTTAAGTTTGATCCCATTCTATTGTTGGTTTTACACGTATGAGACATGTG
GAAAGTT
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