FC869059

Overview
NameFC869059
Unique NameFC869059
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length671
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC869059 vs. ExPASy Swiss-Prot
Match: Y1745_ARATH (Uncharacterized protein At1g51745 OS=Arabidopsis thaliana GN=At1g51745 PE=2 SV=1)

HSP 1 Score: 147.902 bits (372), Expect = 4.508e-35
Identity = 120/235 (51.06%), Postives = 133/235 (56.60%), Query Frame = 1 
Query:    4 ISFQEPILINGSKELSVQGKRRRTPNDSEDDGMEGTKRMRGLEDLGMGVGSKRKVQAGGAPELIQQESASLC--XXXXXXXXXXXXXXXXKGCS-STLKRKRTPVANVHEFLKRKNRRRPLTKVLESTAMVSVPVICDQLATSNGSSL--PGLSDSKASVVESNESRKSTSVVI-NNSESTGVS----YDNGVSLNASGPACDGSHSNQKMKETEISSIPGLA---GKDRLFDVP 669
            IS QE   +  SK   VQ KRRRTPNDSEDDG EG KRMRGLED+G       K QAGG  E  +Q+   +C                  K CS S+LKR      NV E  K KNRRR LTKVLESTAMVSVPV CDQ     G SL   G+ DSK S +ES ES KS SVVI NNS+STGVS    Y+N V          G+  N K K++EISSI   A     DRLFDVP
Sbjct:  172 ISSQEMNNVGASK---VQSKRRRTPNDSEDDGTEGVKRMRGLEDIG-------KEQAGGIVE-HKQDLDLICAVGLSDSVSNGNTIANGNKVCSPSSLKR------NVSECSKMKNRRRQLTKVLESTAMVSVPVTCDQ-----GVSLDCQGIYDSKVSGMESVESMKSVSVVINNNSDSTGVSCEDAYENVV----------GASHNNKAKDSEISSISVSAEDDSSDRLFDVP 374
The following BLAST results are available for this feature:
BLAST of FC869059 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1745_ARATH4.508e-3551.06Uncharacterized protein At1g51745 OS=Arabidopsis t... [more]
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Properties
Property NameValue
Genbank descriptionC31008A11EF AbioticL1 Citrus clementina cDNA clone C31008A11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869059 ID=FC869059; Name=FC869059; organism=Citrus clementina; type=EST; length=671bp
GGAATTTCTTTTCAAGAGCCTATCCTTATTAACGGTTCTAAAGAGCTCTC
TGTGCAAGGAAAAAGGAGAAGAACACCAAATGACTCGGAGGATGATGGAA
TGGAGGGAACAAAGCGTATGAGAGGACTTGAGGACCTTGGCATGGGAGTA
GGCTCAAAAAGGAAAGTACAGGCTGGGGGGGCACCTGAGTTAATTCAACA
AGAAAGTGCTTCATTGTGCAATTCACAAAATGGCAATGTGTCTAATGGAG
GTCCTGTGAGTGGTAGCAAAGGTTGTTCTTCAACTTTAAAAAGAAAGAGA
ACTCCTGTGGCGAATGTCCATGAATTCTTAAAGAGGAAAAATCGCCGTCG
GCCTTTGACAAAAGTTTTGGAGAGTACGGCTATGGTGTCTGTCCCAGTTA
TTTGTGATCAACTTGCCACTTCAAACGGCTCATCTCTTCCAGGGTTATCT
GACAGCAAAGCTTCTGTAGTAGAATCTAATGAGTCAAGGAAAAGTACATC
TGTGGTAATTAACAACTCTGAAAGCACTGGAGTTTCATATGACAATGGCG
TCTCATTAAATGCCTCTGGACCTGCTTGTGATGGTAGCCATAGCAATCAA
AAGATGAAGGAGACTGAAATTTCCAGCATACCAGGTTTGGCAGGGAAAGA
CAGGTTGTTTGATGTGCCATT
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