FC869091

Overview
NameFC869091
Unique NameFC869091
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length470
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig98 contig Ccv1_Contig98:96..565. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869091 vs. ExPASy Swiss-Prot
Match: MDHG_CUCSA (Malate dehydrogenase, glyoxysomal OS=Cucumis sativus GN=MDHG PE=2 SV=1)

HSP 1 Score: 234.958 bits (598), Expect = 1.280e-61
Identity = 119/150 (79.33%), Postives = 126/150 (84.00%), Query Frame = 3
Query:   21 EANQRIVPISAHLYPPNLQMVENSCLRQXXXXXXXXXXXFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIPQRCPTA 470
            + NQRI  ISAHL+PP  QM E+S LR+           FKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDLV+IPAGVPRKPGMTRDDLF INAGIVKTLCEGI + CPTA
Sbjct:    6 DVNQRIARISAHLHPPKYQMEESSVLRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLERALTGMDLVVIPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPTA 155          
BLAST of FC869091 vs. ExPASy Swiss-Prot
Match: MDHG_CITLA (Malate dehydrogenase, glyoxysomal OS=Citrullus lanatus PE=1 SV=1)

HSP 1 Score: 231.491 bits (589), Expect = 1.416e-60
Identity = 117/150 (78.00%), Postives = 125/150 (83.33%), Query Frame = 3
Query:   21 EANQRIVPISAHLYPPNLQMVENSCLRQXXXXXXXXXXXFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIPQRCPTA 470
            + NQRI  ISAHL+PP  QM E+S LR+           FKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDVVN PGVTADISHMDTGAVVRGFLGQ QLE ALTGMDL+I+PAGVPRKPGMTRDDLF INAGIVKTLCEGI + CP A
Sbjct:    6 DVNQRIARISAHLHPPKSQMEESSALRRANCRAKGGAPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVVNAPGVTADISHMDTGAVVRGFLGQQQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKCCPRA 155          
BLAST of FC869091 vs. ExPASy Swiss-Prot
Match: MDHG_ORYSJ (Malate dehydrogenase, glyoxysomal OS=Oryza sativa subsp. japonica GN=Os12g0632700 PE=1 SV=3)

HSP 1 Score: 226.098 bits (575), Expect = 5.947e-59
Identity = 115/155 (74.19%), Postives = 129/155 (83.23%), Query Frame = 3
Query:    6 MEFSSEANQRIVPISAHLYPPNLQMVENSCLRQXXXXXXXXXXXFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIPQRCPTA 470
            ME ++ A +R+  +++HL PP  QM E+  LR            FKVAILGA+GGIGQPLA+LMK+NPLVSVLHLYDVVNTPGVTADISHM+TGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIV+TLCEGI + CP A
Sbjct:    1 MEDAAAAARRMERLASHLRPPASQMEESPLLRGSNCRAKGAAPGFKVAILGASGGIGQPLALLMKMNPLVSVLHLYDVVNTPGVTADISHMNTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLCEGIAKCCPNA 155          
BLAST of FC869091 vs. ExPASy Swiss-Prot
Match: MDHG2_ARATH (Probable malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At2g22780 PE=1 SV=1)

HSP 1 Score: 219.55 bits (558), Expect = 5.567e-57
Identity = 115/152 (75.66%), Postives = 122/152 (80.26%), Query Frame = 3
Query:   21 EANQRIVPISAHLYPPNL--QMVENSCLRQXXXXXXXXXXXFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIPQRCPTA 470
            + NQRI  ISAHL PPNL  Q+ + S L +           FKVAILGAAGGIGQPLAMLMK+NPLVSVLHLYDV N PGVTADISHMDT AVVRGFLGQPQLE ALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIV+TL E I + CP A
Sbjct:    2 DPNQRIARISAHLNPPNLHNQIADGSGLNRVACRAKGGSPGFKVAILGAAGGIGQPLAMLMKMNPLVSVLHLYDVANAPGVTADISHMDTSAVVRGFLGQPQLEEALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVRTLSEAIAKCCPKA 153          
BLAST of FC869091 vs. ExPASy Swiss-Prot
Match: MDHG_SOYBN (Malate dehydrogenase, glyoxysomal OS=Glycine max PE=2 SV=2)

HSP 1 Score: 216.083 bits (549), Expect = 6.155e-56
Identity = 113/155 (72.90%), Postives = 125/155 (80.65%), Query Frame = 3
Query:    6 MEFSSEANQRIVPISAHLYPPNLQMVENSCLRQXXXXXXXXXXXFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIPQRCPTA 470
            ME +S A+ RI  I+ HL P   Q  ++ CL++           FKVAILGAAGGIGQPLAMLMK+NPLVS+LHLYDVVNTPGVT+DISHMDTGAVVRGFLGQ QLE+AL GMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCE I + CP A
Sbjct:    1 MEANSGASDRISRIAGHLRP---QREDDVCLKRSDCRAKGGVSGFKVAILGAAGGIGQPLAMLMKMNPLVSLLHLYDVVNTPGVTSDISHMDTGAVVRGFLGQQQLEDALIGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAIAKCCPKA 152          
BLAST of FC869091 vs. ExPASy Swiss-Prot
Match: MDHG2_BRANA (Malate dehydrogenase 2, glyoxysomal OS=Brassica napus GN=MDH2 PE=3 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.371e-55
Identity = 111/157 (70.70%), Postives = 124/157 (78.98%), Query Frame = 3
Query:    6 MEFSSEANQRIVPISAHLYPPNLQMVE--NSCLRQXXXXXXXXXXXFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIPQRCPTA 470
            MEF  +AN+RI  ISAHL P     +E  NS + +           FKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAGVPRKPGMTRDDLF INAGIVKTLCEG+ + CP A
Sbjct:    1 MEFRGDANKRIAMISAHLQPSFTPQMEAKNSVMGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNA 157          
BLAST of FC869091 vs. ExPASy Swiss-Prot
Match: MDHG1_ARATH (Malate dehydrogenase, glyoxysomal OS=Arabidopsis thaliana GN=At5g09660 PE=1 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 1.371e-55
Identity = 110/155 (70.97%), Postives = 123/155 (79.35%), Query Frame = 3
Query:    6 MEFSSEANQRIVPISAHLYPPNLQMVENSCLRQXXXXXXXXXXXFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIPQRCPTA 470
            MEF  +ANQRI  ISAHL P      +NS + +           FKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAG+PRKPGMTRDDLF INAGIVKTLCEG+ + CP A
Sbjct:    1 MEFRGDANQRIARISAHLTPQ--MEAKNSVIGRENCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGIPRKPGMTRDDLFKINAGIVKTLCEGVAKCCPNA 153          
BLAST of FC869091 vs. ExPASy Swiss-Prot
Match: MDHG1_BRANA (Malate dehydrogenase 1, glyoxysomal OS=Brassica napus GN=MDH1 PE=2 SV=2)

HSP 1 Score: 209.534 bits (532), Expect = 5.761e-54
Identity = 109/157 (69.43%), Postives = 122/157 (77.71%), Query Frame = 3
Query:    6 MEFSSEANQRIVPISAHLYPPNLQMVE--NSCLRQXXXXXXXXXXXFKVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIPQRCPTA 470
            MEF  +A +RI  ISAHL P     +E  NS +             FKVAILGAAGGIGQ L++LMK+NPLVS+LHLYDVVN PGVTAD+SHMDTGAVVRGFLG  QLE+ALTGMDLVIIPAGVPRKPGMTRDDLF INAGIV+TLCEG+ + CP A
Sbjct:    1 MEFRGDAYKRIAMISAHLQPSFTPQMEAKNSVMGLESCRAKGGNPGFKVAILGAAGGIGQSLSLLMKMNPLVSLLHLYDVVNAPGVTADVSHMDTGAVVRGFLGAKQLEDALTGMDLVIIPAGVPRKPGMTRDDLFKINAGIVRTLCEGVAKCCPNA 157          
BLAST of FC869091 vs. ExPASy Swiss-Prot
Match: MDHM1_ARATH (Malate dehydrogenase 1, mitochondrial OS=Arabidopsis thaliana GN=At1g53240 PE=1 SV=1)

HSP 1 Score: 161.384 bits (407), Expect = 1.799e-39
Identity = 79/110 (71.82%), Postives = 89/110 (80.91%), Query Frame = 3
Query:  141 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIPQRCPTA 470
            KVAILGAAGGIGQPLA+LMK+NPLVS L LYD+ NTPGV AD+ H++T + V G++G   L  AL G DLVIIPAGVPRKPGMTRDDLFNINAGIVK LC  I + CP A
Sbjct:   31 KVAILGAAGGIGQPLALLMKLNPLVSSLSLYDIANTPGVAADVGHINTRSEVVGYMGDDNLAKALEGADLVIIPAGVPRKPGMTRDDLFNINAGIVKNLCTAIAKYCPHA 140          
BLAST of FC869091 vs. ExPASy Swiss-Prot
Match: MDHM_EUCGU (Malate dehydrogenase, mitochondrial OS=Eucalyptus gunnii GN=MDH PE=2 SV=1)

HSP 1 Score: 160.999 bits (406), Expect = 2.350e-39
Identity = 77/110 (70.00%), Postives = 91/110 (82.73%), Query Frame = 3
Query:  141 KVAILGAAGGIGQPLAMLMKINPLVSVLHLYDVVNTPGVTADISHMDTGAVVRGFLGQPQLENALTGMDLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEGIPQRCPTA 470
            KVA+LGAAGGIGQPLA+LMK+NPLVS L LYD+  TPGV AD+ H++T + V G++G+ QL  AL G D+VIIPAGVPRKPGMTRDDLFNINAGIVK+LC  I + CP A
Sbjct:   36 KVAVLGAAGGIGQPLALLMKLNPLVSQLALYDIAGTPGVAADVGHINTRSEVAGYVGEEQLGQALEGSDVVIIPAGVPRKPGMTRDDLFNINAGIVKSLCTAIAKYCPNA 145          
The following BLAST results are available for this feature:
BLAST of FC869091 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 164
Match NameE-valueIdentityDescription
MDHG_CUCSA1.280e-6179.33Malate dehydrogenase, glyoxysomal OS=Cucumis sativ... [more]
MDHG_CITLA1.416e-6078.00Malate dehydrogenase, glyoxysomal OS=Citrullus lan... [more]
MDHG_ORYSJ5.947e-5974.19Malate dehydrogenase, glyoxysomal OS=Oryza sativa ... [more]
MDHG2_ARATH5.567e-5775.66Probable malate dehydrogenase, glyoxysomal OS=Arab... [more]
MDHG_SOYBN6.155e-5672.90Malate dehydrogenase, glyoxysomal OS=Glycine max P... [more]
MDHG2_BRANA1.371e-5570.70Malate dehydrogenase 2, glyoxysomal OS=Brassica na... [more]
MDHG1_ARATH1.371e-5570.97Malate dehydrogenase, glyoxysomal OS=Arabidopsis t... [more]
MDHG1_BRANA5.761e-5469.43Malate dehydrogenase 1, glyoxysomal OS=Brassica na... [more]
MDHM1_ARATH1.799e-3971.82Malate dehydrogenase 1, mitochondrial OS=Arabidops... [more]
MDHM_EUCGU2.350e-3970.00Malate dehydrogenase, mitochondrial OS=Eucalyptus ... [more]

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Properties
Property NameValue
Genbank descriptionC31008D10EF AbioticL1 Citrus clementina cDNA clone C31008D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869091 ID=FC869091; Name=FC869091; organism=Citrus clementina; type=EST; length=470bp
AGAAAATGGAGTTTAGCTCAGAGGCTAATCAGCGCATTGTTCCCATCTCT
GCTCATCTTTACCCTCCAAATCTCCAGATGGTGGAGAATTCTTGCTTGAG
GCAAGCTAAAGGCCGGGCAAAAGGCGGGGCAGCTGGATTCAAAGTAGCCA
TCTTGGGTGCTGCTGGAGGCATTGGTCAACCCCTTGCAATGCTAATGAAG
ATAAACCCCCTGGTCTCAGTCCTTCACCTCTATGATGTTGTCAATACCCC
TGGTGTCACTGCTGATATTAGCCATATGGACACCGGCGCTGTGGTACGGG
GTTTCCTAGGCCAGCCACAGCTTGAGAATGCTCTCACAGGGATGGACCTT
GTCATTATCCCTGCCGGCGTTCCGAGGAAGCCTGGAATGACCAGGGATGA
TCTTTTCAATATCAATGCTGGAATTGTCAAGACCCTCTGTGAAGGCATCC
CACAGCGTTGCCCCACTGCG
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