FC869102

Overview
NameFC869102
Unique NameFC869102
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length610
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig3717 contig Ccv1_Contig3717:168..777. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: GOX_SPIOL (Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia oleracea PE=1 SV=1)

HSP 1 Score: 291.582 bits (745), Expect = 2.129e-78
Identity = 149/173 (86.13%), Postives = 155/173 (89.60%), Query Frame = 1
Query:   91 EITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVL 609
            EITNV EYEA+AK+KLPKMVYDYYASGAEDQWTL ENRNAFSRILFRPRIL DV+ IDMTTT+LGF ISMPIMIAPTA QKMAHPEGE          GTIMTLSSWATSSVEEV+STGPGIRFFQLYV KDRNV AQLV+RAERAGFKAIALTVDTPRLGRREADIKNRFVL
Sbjct:    2 EITNVNEYEAIAKQKLPKMVYDYYASGAEDQWTLAENRNAFSRILFRPRILIDVTNIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVL 174          
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: GOX2_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 OS=Arabidopsis thaliana GN=At3g14420 PE=1 SV=1)

HSP 1 Score: 287.345 bits (734), Expect = 4.015e-77
Identity = 145/173 (83.82%), Postives = 155/173 (89.60%), Query Frame = 1
Query:   91 EITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVL 609
            EITNV EY+A+AK+KLPKMVYDYYASGAEDQWTLQENRNAF+RILFRPRIL DVSKIDMTTTVLGF ISMPIM+APTA QKMAHP+GE          GTIMTLSSWATSSVEEV+STGPGIRFFQLYV K+RNV  QLV+RAERAGFKAIALTVDTPRLGRRE+DIKNRF L
Sbjct:    2 EITNVTEYDAIAKQKLPKMVYDYYASGAEDQWTLQENRNAFARILFRPRILIDVSKIDMTTTVLGFKISMPIMVAPTAMQKMAHPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKNRNVVEQLVRRAERAGFKAIALTVDTPRLGRRESDIKNRFTL 174          
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: GOX1_ARATH (Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 OS=Arabidopsis thaliana GN=At3g14415 PE=1 SV=1)

HSP 1 Score: 281.952 bits (720), Expect = 1.687e-75
Identity = 142/173 (82.08%), Postives = 153/173 (88.44%), Query Frame = 1
Query:   91 EITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVL 609
            EITNV EY+A+AK KLPKMVYDYYASGAEDQWTLQENRNAF+RILFRPRIL DV+KIDM TTVLGF ISMPIM+APTAFQKMAHP+GE          GTIMTLSSWATSSVEEV+STGPGIRFFQLYV K+R V  QLV+RAE+AGFKAIALTVDTPRLGRRE+DIKNRF L
Sbjct:    2 EITNVTEYDAIAKAKLPKMVYDYYASGAEDQWTLQENRNAFARILFRPRILIDVNKIDMATTVLGFKISMPIMVAPTAFQKMAHPDGEYATARAASAAGTIMTLSSWATSSVEEVASTGPGIRFFQLYVYKNRKVVEQLVRRAEKAGFKAIALTVDTPRLGRRESDIKNRFTL 174          
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: HAOX1_HUMAN (Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1 SV=1)

HSP 1 Score: 172.94 bits (437), Expect = 1.104e-42
Identity = 89/170 (52.35%), Postives = 118/170 (69.41%), Query Frame = 1
Query:  103 VMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVL 609
            + +YE  AK  LPK +YDYY SGA D+ TL +N  AFSR    PR+LR+V++ D++T+VLG  +SMPI +  TA Q+MAH +GE          GT M LSSWATSS+EEV+  GP  +R+ QLY+ KDR V  +LV++AE+ G+KAI +TVDTP LG R  D++NRF L
Sbjct:    8 INDYEQHAKSVLPKSIYDYYRSGANDEETLADNIAAFSRWKLYPRMLRNVAETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLYIYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKL 177          
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: HAOX1_MOUSE (Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2 SV=1)

HSP 1 Score: 172.555 bits (436), Expect = 1.441e-42
Identity = 90/170 (52.94%), Postives = 115/170 (67.65%), Query Frame = 1
Query:  103 VMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVL 609
            + +YE   +  L K VYDYY SGA DQ TL +N  AFSR    PR+LR+V+ ID++T+VLG  +SMPI +  TA Q MAH +GE          GT M LSSWATSS+EEV+  GP  +R+ QLY+ KDR +  Q+VKRAE+ G+KAI +TVDTP LG R  D++NRF L
Sbjct:    8 ISDYEQHVRSVLQKSVYDYYRSGANDQETLADNIQAFSRWKLYPRMLRNVADIDLSTSVLGQRVSMPICVGATAMQCMAHVDGELATVRACQTMGTGMMLSSWATSSIEEVAEAGPEALRWMQLYIYKDREISRQIVKRAEKQGYKAIFVTVDTPYLGNRIDDVRNRFKL 177          
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: HAOX_DICDI (Hydroxyacid oxidase OS=Dictyostelium discoideum GN=haox PE=3 SV=1)

HSP 1 Score: 169.088 bits (427), Expect = 1.593e-41
Identity = 98/187 (52.41%), Postives = 120/187 (64.17%), Query Frame = 1
Query:   52 SRKPSDSIMTYISEITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSS-TGPGIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVL 609
            S K ++ + +++S    V E    AK  LPKM YDYYASG+ DQ TL EN NAFSRI   PR L DVSK++  T + G +IS PI+IAP A Q+MA   GE           TIMTLSS +T+SVE++SS T     +FQLYV KDR V  +LVKRAE  G+ A+ LTVDTP LG+R AD KN F L
Sbjct:   21 SNKKTNRLDSFVS----VSELHEEAKRLLPKMAYDYYASGSNDQITLAENENAFSRIKLVPRSLVDVSKVNTKTRIFGRDISTPILIAPWAMQRMASQRGELDTVEASKEFNTIMTLSSLSTTSVEDLSSATNGNPGWFQLYVFKDRKVSEELVKRAESIGYSALVLTVDTPFLGKRTADFKNSFKL 203          
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: HAOX2_BOVIN (Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 5.138e-32
Identity = 68/165 (41.21%), Postives = 102/165 (61.82%), Query Frame = 1
Query:  109 EYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNR 600
            ++   A+E L K  +D+   GA+D  T  EN  AF +I  RPR L+DVSK+DM TT+ G  IS PI IAPT F ++A P+GE                S++A+ S+E++ +  P G+R+FQLYV  +R ++ Q++++ E  GFKA+ +TVD P++G R  DI N+
Sbjct:    8 DFREHAREHLSKSTWDFIEGGADDCCTRDENMAAFKKIRLRPRYLKDVSKVDMRTTIQGAEISAPICIAPTGFHRLAWPDGEMSTARAAQAASICYITSTYASCSLEDIVAAAPRGLRWFQLYVHPNRQINKQMIQKVESLGFKALVITVDVPKVGNRRNDITNQ 172          
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: CYB2_HANAN (Cytochrome b2, mitochondrial OS=Hansenula anomala GN=CYB2 PE=1 SV=2)

HSP 1 Score: 133.65 bits (335), Expect = 7.419e-31
Identity = 68/175 (38.86%), Postives = 105/175 (60.00%), Query Frame = 1
Query:   85 ISEITNVMEYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTG-PG-IRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRF 603
            +S++ N+ ++E +A++ LP     YY S A+D+ TL+EN NA+ RI F P+IL DV  +D++T   G   S P  I+ TA  K+ HPEGE            +  +S+ A+ S +E++    PG  +++QLYV  DR++  + V+ AE  G K + +TVD P LGRRE D+K +F
Sbjct:  184 LSQMINLHDFETIARQILPPPALAYYCSAADDEVTLRENHNAYHRIFFNPKILIDVKDVDISTEFFGEKTSAPFYISATALAKLGHPEGEVAIAKGAGREDVVQMISTLASCSFDEIADARIPGQQQWYQLYVNADRSITEKAVRHAEERGMKGLFITVDAPSLGRREKDMKMKF 358          
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: HAOX2_RAT (Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2 PE=1 SV=2)

HSP 1 Score: 133.265 bits (334), Expect = 9.690e-31
Identity = 71/168 (42.26%), Postives = 104/168 (61.90%), Query Frame = 1
Query:  109 EYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNRFVL 609
            +++A A+++L K  +D+    A+D  T  EN  AF RI  RPR LRD+SK+D  TT+ G  IS PI I+PTAF  +A P+GE               +SS+A+ S+E++ +  P G R+FQLY+  D + + Q+V+RAE  GFKA+ +T+DTP LG R  D +N+  L
Sbjct:    8 DFKAHAQKQLSKTSWDFIEGEADDGITYSENIAAFKRIRLRPRYLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLYMKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNL 175          
BLAST of FC869102 vs. ExPASy Swiss-Prot
Match: HAOX2_HUMAN (Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2 SV=1)

HSP 1 Score: 133.265 bits (334), Expect = 9.690e-31
Identity = 70/165 (42.42%), Postives = 100/165 (60.61%), Query Frame = 1
Query:  109 EYEALAKEKLPKMVYDYYASGAEDQWTLQENRNAFSRILFRPRILRDVSKIDMTTTVLGFNISMPIMIAPTAFQKMAHPEGECXXXXXXXXXGTIMTLSSWATSSVEEVSSTGP-GIRFFQLYVTKDRNVDAQLVKRAERAGFKAIALTVDTPRLGRREADIKNR 600
            +++A A+E+L K   D+   GA+D  T  +N  AF RI  RPR LRDVS++D  TT+ G  IS PI IAPT F  +  P+GE          G     S++A+ S+E++    P G+R+FQLYV  D  ++ QL++R E  GFKA+ +T+DTP  G R  DI+N+
Sbjct:    8 DFQAHAREQLSKSTRDFIEGGADDSITRDDNIAAFKRIRLRPRYLRDVSEVDTRTTIQGEEISAPICIAPTGFHCLVWPDGEMSTARAAQAAGICYITSTFASCSLEDIVIAAPEGLRWFQLYVHPDLQLNKQLIQRVESLGFKALVITLDTPVCGNRRHDIRNQ 172          
The following BLAST results are available for this feature:
BLAST of FC869102 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 127
Match NameE-valueIdentityDescription
GOX_SPIOL2.129e-7886.13Peroxisomal (S)-2-hydroxy-acid oxidase OS=Spinacia... [more]
GOX2_ARATH4.015e-7783.82Probable peroxisomal (S)-2-hydroxy-acid oxidase 2 ... [more]
GOX1_ARATH1.687e-7582.08Probable peroxisomal (S)-2-hydroxy-acid oxidase 1 ... [more]
HAOX1_HUMAN1.104e-4252.35Hydroxyacid oxidase 1 OS=Homo sapiens GN=HAO1 PE=1... [more]
HAOX1_MOUSE1.441e-4252.94Hydroxyacid oxidase 1 OS=Mus musculus GN=Hao1 PE=2... [more]
HAOX_DICDI1.593e-4152.41Hydroxyacid oxidase OS=Dictyostelium discoideum GN... [more]
HAOX2_BOVIN5.138e-3241.21Hydroxyacid oxidase 2 OS=Bos taurus GN=HAO2 PE=2 S... [more]
CYB2_HANAN7.419e-3138.86Cytochrome b2, mitochondrial OS=Hansenula anomala ... [more]
HAOX2_RAT9.690e-3142.26Hydroxyacid oxidase 2 OS=Rattus norvegicus GN=Hao2... [more]
HAOX2_HUMAN9.690e-3142.42Hydroxyacid oxidase 2 OS=Homo sapiens GN=HAO2 PE=2... [more]

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Properties
Property NameValue
Genbank descriptionC31008E09EF AbioticL1 Citrus clementina cDNA clone C31008E09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869102 ID=FC869102; Name=FC869102; organism=Citrus clementina; type=EST; length=610bp
CTTTATTGCTTTGCGCTCCCTTCACTGATTCATTTCTGCTTCCCTTGTTG
TTCAAGGAAGCCAAGCGATAGCATTATGACTTATATATCGGAGATCACCA
ATGTTATGGAGTATGAGGCTCTTGCAAAGGAGAAATTGCCGAAGATGGTT
TATGACTACTATGCATCAGGTGCTGAGGACCAGTGGACTCTTCAGGAAAA
CCGTAATGCATTCTCTAGGATTCTATTTCGACCACGCATTCTTAGAGATG
TAAGCAAGATTGACATGACTACAACAGTCTTGGGCTTCAACATTTCCATG
CCCATCATGATTGCTCCAACGGCATTTCAGAAAATGGCTCATCCTGAAGG
GGAGTGTGCAACAGCAAGGGCAGCCTCAGCAGCTGGCACAATCATGACAT
TATCTTCATGGGCCACTTCCAGTGTCGAGGAAGTTTCTTCAACGGGACCT
GGAATTCGCTTTTTCCAACTCTATGTGACCAAGGACAGGAATGTGGACGC
ACAGCTAGTAAAAAGAGCTGAAAGGGCTGGTTTTAAGGCGATTGCCCTTA
CCGTCGATACTCCAAGGCTTGGCCGTCGGGAAGCTGATATTAAGAACAGA
TTTGTTTTGC
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