FC869106

Overview
NameFC869106
Unique NameFC869106
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length638
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC869106 vs. ExPASy Swiss-Prot
Match: NAC8_ARATH (NAC domain-containing protein 8 OS=Arabidopsis thaliana GN=NAC008 PE=2 SV=1)

HSP 1 Score: 314.309 bits (804), Expect = 3.320e-85
Identity = 144/187 (77.01%), Postives = 163/187 (87.17%), Query Frame = 3 
Query:   78 MAGPSWLVDSNRIATKIKSASGTGDPERVKWKSNPTKACPNCHHVIDNSDVAHEWPGLPRGVKFDPSDQEIVWHLLAKAGLEGLNPHPFIDEFIPTVDQDGGICYTHPQNLPGVKQDGSAAHFFYRAIKAYSTGTRKRRKINGDDFGEVRWHKTGRTKPVMLDGVQKGCKKIMVLYMSMVRGGKAEK 638
            MAG SWL+DSNRIATKI SAS + DP +V WKSNP++ CP C HVIDNSDV  +WPGLPRGVKFDPSD EI+WHLLAK+GL GL+ HPFIDEFIPTV+QD GICYTHP+NLPGVK DG+ +HFF++AIKAYSTGTRKRRKI+ DDFG+VRWHKTGRTKPV+LDGVQ+GCKKIMVLY     GGKA K
Sbjct:    1 MAGRSWLIDSNRIATKIMSASASSDPRQVVWKSNPSRHCPKCQHVIDNSDVVDDWPGLPRGVKFDPSDPEIIWHLLAKSGLSGLSSHPFIDEFIPTVNQDDGICYTHPKNLPGVKSDGTVSHFFHKAIKAYSTGTRKRRKIHDDDFGDVRWHKTGRTKPVVLDGVQRGCKKIMVLY-----GGKAVK 182
The following BLAST results are available for this feature:
BLAST of FC869106 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
NAC8_ARATH3.320e-8577.01NAC domain-containing protein 8 OS=Arabidopsis tha... [more]
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Properties
Property NameValue
Genbank descriptionC31008F01EF AbioticL1 Citrus clementina cDNA clone C31008F01, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869106 ID=FC869106; Name=FC869106; organism=Citrus clementina; type=EST; length=638bp
GACAGAATATTTCATTTTCGTTTCATTAAGAATATACCAAAAATTAAAGC
CAAAGAAGCGAAGCAGAGCAAAAAGTGATGGCTGGACCATCATGGTTGGT
GGACAGTAACAGAATTGCTACAAAGATCAAGAGTGCATCTGGCACAGGTG
ATCCGGAAAGAGTTAAATGGAAGAGCAATCCTACAAAAGCTTGTCCCAAT
TGTCACCATGTCATCGACAACAGTGATGTTGCTCACGAGTGGCCAGGATT
ACCCAGGGGTGTGAAATTTGACCCATCTGATCAAGAAATTGTATGGCATT
TACTTGCAAAAGCTGGTTTGGAAGGCTTGAATCCCCATCCATTTATTGAT
GAGTTCATCCCAACTGTTGATCAAGATGGTGGAATCTGTTACACCCATCC
TCAGAATTTGCCAGGTGTTAAGCAAGATGGAAGTGCAGCACACTTCTTTT
ATAGAGCTATCAAGGCTTACAGTACTGGAACTCGAAAGCGTAGAAAGATA
AATGGTGATGATTTTGGTGAGGTGCGCTGGCACAAGACTGGCAGGACTAA
ACCAGTGATGTTAGATGGGGTTCAAAAAGGGTGTAAGAAGATTATGGTTC
TCTATATGAGCATGGTCAGGGGAGGGAAAGCTGAGAAA
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