FC869126

Overview
NameFC869126
Unique NameFC869126
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length649
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC869126 vs. ExPASy Swiss-Prot
Match: PGKY_TOBAC (Phosphoglycerate kinase, cytosolic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 399.823 bits (1026), Expect = 6.248e-111
Identity = 198/216 (91.67%), Postives = 213/216 (98.61%), Query Frame = 2 
Query:    2 NVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAG 649
            NVRF+KEEEKN+PEFAKKLASLADLYVNDAFG+AHRAHASTEGVAK+LKP+VAGFLMQKELDYLVGAV+NP+KPFAAIVGGSKVS+KIGVIESLLEKVD+LLLGGGMIFTFYKAQG++VGSSLVEEDKLDLATSLMEKAK+KGVSLLLPTDVVIADKFAADANSKVVPA+ IPDGWMGLD+GPDAIKSF  ALDTTKT+IWNGPMGVFEFDKFAAG
Sbjct:  120 NVRFYKEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVAKYLKPAVAGFLMQKELDYLVGAVANPQKPFAAIVGGSKVSSKIGVIESLLEKVDVLLLGGGMIFTFYKAQGYAVGSSLVEEDKLDLATSLMEKAKAKGVSLLLPTDVVIADKFAADANSKVVPASEIPDGWMGLDIGPDAIKSFGSALDTTKTVIWNGPMGVFEFDKFAAG 335
[Close]
BLAST of FC869126 vs. ExPASy Swiss-Prot
Match: PGKH_SPIOL (Phosphoglycerate kinase, chloroplastic (Fragment) OS=Spinacia oleracea PE=2 SV=2)

HSP 1 Score: 392.889 bits (1008), Expect = 7.638e-109
Identity = 195/216 (90.28%), Postives = 210/216 (97.22%), Query Frame = 2 
Query:    2 NVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAG 649
            NVRF+KEEEKNDPEFAKKLASLADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYLVGAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKLDLATSL+ KAK KGVSLLLPTDVVIADKFAADA+SK+VPA+ IPDGWMGLD+GPD+IK+FSEALDTT+T+IWNGPMGVFEF+KFAAG
Sbjct:  147 NVRFYKEEEKNDPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGMSVGSSLVEEDKLDLATSLLAKAKEKGVSLLLPTDVVIADKFAADADSKIVPASGIPDGWMGLDIGPDSIKTFSEALDTTQTVIWNGPMGVFEFEKFAAG 362
[Close]
BLAST of FC869126 vs. ExPASy Swiss-Prot
Match: PGKH_TOBAC (Phosphoglycerate kinase, chloroplastic OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 390.963 bits (1003), Expect = 2.902e-108
Identity = 192/216 (88.89%), Postives = 211/216 (97.69%), Query Frame = 2 
Query:    2 NVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAG 649
            NVRF+KEEEKN+PEFAKKLASLADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYLVGAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKL+LATSL+EKAK+KGVSLLLP+DVVIADKFA DANSK+VPA+AIPDGWMGLD+GPD++K+F++ALDTTKT+IWNGPMGVFEFDKFA G
Sbjct:  194 NVRFYKEEEKNEPEFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLEKAKAKGVSLLLPSDVVIADKFAPDANSKIVPASAIPDGWMGLDIGPDSVKTFNDALDTTKTVIWNGPMGVFEFDKFAVG 409
[Close]
BLAST of FC869126 vs. ExPASy Swiss-Prot
Match: PGKY_WHEAT (Phosphoglycerate kinase, cytosolic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 388.652 bits (997), Expect = 1.440e-107
Identity = 192/216 (88.89%), Postives = 209/216 (96.76%), Query Frame = 2 
Query:    2 NVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAG 649
            NVRF+KEEEKNDPEFAKKLAS+ADLYVNDAFG+AHRAHASTEGV KFL+PSVAGFLMQKELDYLVGAV+NPKKPFAAIVGGSKVS+KIGVIESLL KVDIL+LGGGMIFTFYKAQG +VG SLVEEDKL+LATSL+E AKSKGV LLLPTDVV+ADKFAADA SK+VPATAIPDGWMGLDVGPD+IK+F+EALDTTKT+IWNGPMGVFEF+KFAAG
Sbjct:  120 NVRFYKEEEKNDPEFAKKLASVADLYVNDAFGTAHRAHASTEGVTKFLRPSVAGFLMQKELDYLVGAVANPKKPFAAIVGGSKVSSKIGVIESLLAKVDILILGGGMIFTFYKAQGLAVGKSLVEEDKLELATSLIETAKSKGVKLLLPTDVVVADKFAADAESKIVPATAIPDGWMGLDVGPDSIKTFAEALDTTKTVIWNGPMGVFEFEKFAAG 335
[Close]
BLAST of FC869126 vs. ExPASy Swiss-Prot
Match: PGKH_WHEAT (Phosphoglycerate kinase, chloroplastic OS=Triticum aestivum PE=2 SV=1)

HSP 1 Score: 381.719 bits (979), Expect = 1.761e-105
Identity = 188/216 (87.04%), Postives = 208/216 (96.30%), Query Frame = 2 
Query:    2 NVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAG 649
            NVRF+KEEEKNDPEFAKKLASLADL+VNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYL GAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKL+LATSL+ KAK+KGVSLLLP+DV+IADKFA DANS+ VPA+AIPDGWMGLD+GPD++K+F++ALDTT+TIIWNGPMGVFEFDKFA G
Sbjct:  191 NVRFYKEEEKNDPEFAKKLASLADLFVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATSLLAKAKAKGVSLLLPSDVIIADKFAPDANSQTVPASAIPDGWMGLDIGPDSVKTFNDALDTTQTIIWNGPMGVFEFDKFAVG 406
[Close]
BLAST of FC869126 vs. ExPASy Swiss-Prot
Match: PGKH_ARATH (Phosphoglycerate kinase, chloroplastic OS=Arabidopsis thaliana GN=At1g56190 PE=1 SV=2)

HSP 1 Score: 380.178 bits (975), Expect = 5.123e-105
Identity = 187/216 (86.57%), Postives = 207/216 (95.83%), Query Frame = 2 
Query:    2 NVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAG 649
            NVRF+KEEEKN+P+FAKKLASLADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYLVGAVSNPK+PFAAIVGGSKVS+KIGVIESLLEK DILLLGGGMIFTFYKAQG SVGSSLVEEDKL+LAT L+ KAK+KGVSLLLPTDVV+ADKFA DANSK+VPA+ I DGWMGLD+GPD+IK+F+EALDTT+T+IWNGPMGVFE +KFAAG
Sbjct:  192 NVRFYKEEEKNEPDFAKKLASLADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLVGAVSNPKRPFAAIVGGSKVSSKIGVIESLLEKCDILLLGGGMIFTFYKAQGLSVGSSLVEEDKLELATELLAKAKAKGVSLLLPTDVVVADKFAPDANSKIVPASGIEDGWMGLDIGPDSIKTFNEALDTTQTVIWNGPMGVFEMEKFAAG 407
[Close]
BLAST of FC869126 vs. ExPASy Swiss-Prot
Match: PGK_ANAVT (Phosphoglycerate kinase OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937) GN=pgk PE=3 SV=1)

HSP 1 Score: 335.88 bits (860), Expect = 1.108e-91
Identity = 164/216 (75.93%), Postives = 188/216 (87.04%), Query Frame = 2 
Query:    2 NVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAG 649
            NVRF+KEEEKNDPEFAKKLA+ AD YVNDAFG+AHRAHASTEGV KFL PSVAG+L++KEL YL  A+ NP++P AAI+GGSKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G +VG SLVEEDKL+LA SL  KAK +GVSLLLPTDVV+AD FA DANS+ V    IPDGWMGLD+GPD++K F EAL  TKT+IWNGPMGVFEFDKFAAG
Sbjct:  119 NVRFYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLELAKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIDNIPDGWMGLDIGPDSVKVFQEALADTKTVIWNGPMGVFEFDKFAAG 334
[Close]
BLAST of FC869126 vs. ExPASy Swiss-Prot
Match: PGKH_VOLCA (Phosphoglycerate kinase, chloroplastic OS=Volvox carteri GN=PGK PE=2 SV=1)

HSP 1 Score: 334.724 bits (857), Expect = 2.469e-91
Identity = 165/216 (76.39%), Postives = 189/216 (87.50%), Query Frame = 2 
Query:    2 NVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAG 649
            NVRF+KEEEKNDPEFAKKLAS ADLYVNDAFG+AHRAHASTEGV KFLKPSVAGFL+QKELDYL GAVS PK+PF AIVGGSKVS+KI VIE L+EK D +++GGGMIFTFYKA+G  VGSSLVEEDKL+LA +L   AK+KGV LLLP+DVV+ADKF A+AN++ V   AIPDGWMGLD+GPD+IK+F +AL   KT++WNGPMGVFEF KFA G
Sbjct:  181 NVRFYKEEEKNDPEFAKKLASNADLYVNDAFGTAHRAHASTEGVTKFLKPSVAGFLLQKELDYLDGAVSAPKRPFVAIVGGSKVSSKITVIEKLMEKCDKIIIGGGMIFTFYKARGLKVGSSLVEEDKLELAKNLEAIAKAKGVQLLLPSDVVVADKFDANANTQTVSVEAIPDGWMGLDIGPDSIKTFQDALADAKTVVWNGPMGVFEFPKFAVG 396
[Close]
BLAST of FC869126 vs. ExPASy Swiss-Prot
Match: PGK_ANASP (Phosphoglycerate kinase OS=Anabaena sp. (strain PCC 7120) GN=pgk PE=1 SV=1)

HSP 1 Score: 333.569 bits (854), Expect = 5.499e-91
Identity = 163/216 (75.46%), Postives = 187/216 (86.57%), Query Frame = 2 
Query:    2 NVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAG 649
            NVRF+KEEEKNDPEFAKKLA+ AD YVNDAFG+AHRAHASTEGV KFL PSVAG+L++KEL YL  A+ NP++P AAI+GGSKVS+KIGVIE+LLEK D L++GGGMIFTFYKA+G +VG SLVEEDKL+LA SL  KAK +GVSLLLPTDVV+AD FA DANS+ V    IPDGWMGLD+GPD++K F  AL  TKT+IWNGPMGVFEFDKFAAG
Sbjct:  119 NVRFYKEEEKNDPEFAKKLAANADFYVNDAFGTAHRAHASTEGVTKFLSPSVAGYLVEKELQYLQSAIENPQRPLAAIIGGSKVSSKIGVIETLLEKCDKLIIGGGMIFTFYKARGLNVGKSLVEEDKLELAKSLEAKAKERGVSLLLPTDVVLADNFAPDANSQTVSIENIPDGWMGLDIGPDSVKVFQAALADTKTVIWNGPMGVFEFDKFAAG 334
[Close]
BLAST of FC869126 vs. ExPASy Swiss-Prot
Match: PGK_SYNS3 (Phosphoglycerate kinase OS=Synechococcus sp. (strain CC9311) GN=pgk PE=3 SV=1)

HSP 1 Score: 332.413 bits (851), Expect = 1.225e-90
Identity = 164/216 (75.93%), Postives = 186/216 (86.11%), Query Frame = 2 
Query:    2 NVRFHKEEEKNDPEFAKKLASLADLYVNDAFGSAHRAHASTEGVAKFLKPSVAGFLMQKELDYLVGAVSNPKKPFAAIVGGSKVSTKIGVIESLLEKVDILLLGGGMIFTFYKAQGHSVGSSLVEEDKLDLATSLMEKAKSKGVSLLLPTDVVIADKFAADANSKVVPATAIPDGWMGLDVGPDAIKSFSEALDTTKTIIWNGPMGVFEFDKFAAG 649
            NVRF  EEEKND +FAK+LA LAD+YVNDAFG+AHRAHASTEGV KFLKPSVAGFLM+KEL YL GAV  PK+P AAIVGGSKVS+KIGV+E+L++K D +L+GGGMIFTFYKA+G +VG SLVEEDKL+LA  L  KAK+KGV LLLPTDV++AD FA DANS+V   TAIPDGWMGLD+GPDAIK F  AL   KT+IWNGPMGVFEFDKFAAG
Sbjct:  120 NVRFFAEEEKNDADFAKQLAGLADVYVNDAFGAAHRAHASTEGVTKFLKPSVAGFLMEKELQYLQGAVDEPKRPLAAIVGGSKVSSKIGVLEALIDKCDKVLIGGGMIFTFYKARGLAVGKSLVEEDKLELAKELEAKAKAKGVELLLPTDVLLADNFAPDANSQVADVTAIPDGWMGLDIGPDAIKVFQAALADCKTVIWNGPMGVFEFDKFAAG 335
The following BLAST results are available for this feature:
BLAST of FC869126 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
PGKY_TOBAC6.248e-11191.67Phosphoglycerate kinase, cytosolic OS=Nicotiana ta... [more]
PGKH_SPIOL7.638e-10990.28Phosphoglycerate kinase, chloroplastic (Fragment) ... [more]
PGKH_TOBAC2.902e-10888.89Phosphoglycerate kinase, chloroplastic OS=Nicotian... [more]
PGKY_WHEAT1.440e-10788.89Phosphoglycerate kinase, cytosolic OS=Triticum aes... [more]
PGKH_WHEAT1.761e-10587.04Phosphoglycerate kinase, chloroplastic OS=Triticum... [more]
PGKH_ARATH5.123e-10586.57Phosphoglycerate kinase, chloroplastic OS=Arabidop... [more]
PGK_ANAVT1.108e-9175.93Phosphoglycerate kinase OS=Anabaena variabilis (st... [more]
PGKH_VOLCA2.469e-9176.39Phosphoglycerate kinase, chloroplastic OS=Volvox c... [more]
PGK_ANASP5.499e-9175.46Phosphoglycerate kinase OS=Anabaena sp. (strain PC... [more]
PGK_SYNS31.225e-9075.93Phosphoglycerate kinase OS=Synechococcus sp. (stra... [more]

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Properties
Property NameValue
Genbank descriptionC31008G09EF AbioticL1 Citrus clementina cDNA clone C31008G09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869126 ID=FC869126; Name=FC869126; organism=Citrus clementina; type=EST; length=649bp
AAATGTGAGGTTCCATAAGGAGGAAGAGAAGAATGACCCAGAGTTTGCTA
AGAAGCTAGCTTCTCTTGCAGATCTCTATGTTAATGATGCATTCGGATCT
GCCCATAGAGCCCATGCTTCCACTGAGGGTGTGGCTAAGTTCTTGAAGCC
TTCTGTGGCTGGTTTCCTTATGCAAAAGGAACTAGATTATCTTGTTGGAG
CTGTTTCAAATCCCAAGAAACCATTTGCTGCCATTGTTGGTGGTTCAAAG
GTGTCAACTAAGATCGGTGTTATTGAATCACTTTTGGAGAAGGTTGACAT
TCTATTGCTCGGTGGAGGAATGATCTTTACCTTTTACAAGGCCCAAGGAC
ACTCTGTTGGTTCATCCCTTGTTGAGGAAGACAAGCTTGATCTCGCTACG
TCACTTATGGAGAAGGCCAAATCTAAAGGGGTGTCTCTTCTGCTCCCTAC
TGATGTTGTTATTGCTGACAAGTTTGCTGCTGATGCCAACAGCAAGGTGG
TGCCAGCAACGGCAATTCCAGATGGTTGGATGGGCTTGGATGTTGGACCT
GATGCCATCAAGTCATTCAGTGAAGCTTTGGATACTACTAAAACCATCAT
CTGGAATGGACCTATGGGTGTGTTTGAATTTGATAAATTTGCTGCTGGC
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