FC869128

Overview
NameFC869128
Unique NameFC869128
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length701
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig884 contig Ccv1_Contig884:6..706. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869128 vs. ExPASy Swiss-Prot
Match: COMT1_POPKI (Caffeic acid 3-O-methyltransferase 1 OS=Populus kitakamiensis GN=HOMT1 PE=3 SV=1)

HSP 1 Score: 247.284 bits (630), Expect = 5.956e-65
Identity = 127/233 (54.51%), Postives = 162/233 (69.53%), Query Frame = 2
Query:    5 EIQENMSNEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQ 697
            E Q   +  + +E   +A ++   SVL M +K  I L L EI+AKAGPGA LS SEIA+ LP TKN DAP MLDRIL LLASY I+ CS+ D+ DG   RLYGL  V K+   N+DGVS+ P+  + QDK  ++SW  LK+ I+EGG+PF++ +G  AFEY G DPRFN+VF+  M +H+T+ ++KILE YKGFE +  LVDVGG  G  +  I SKYP IKGINFDLPHVI+
Sbjct:    6 ETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLP-TKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIE 237          
BLAST of FC869128 vs. ExPASy Swiss-Prot
Match: COMT1_POPTM (Caffeic acid 3-O-methyltransferase 1 OS=Populus tremuloides GN=OMT1 PE=1 SV=1)

HSP 1 Score: 246.128 bits (627), Expect = 1.327e-64
Identity = 126/233 (54.08%), Postives = 162/233 (69.53%), Query Frame = 2
Query:    5 EIQENMSNEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQ 697
            E Q   +  + +E   +A ++   SVL M +K  I L L EI+AKAGPGA LS SEIA+ LP TKN DAP MLDRIL LLASY I+ CS+ D+ DG   RLYGL  V K+   N+DGVS+ P+  + QDK  ++SW  LK+ I++GG+PF++ +G  AFEY G DPRFN+VF+  M +H+T+ ++KILE YKGFE +  LVDVGG  G  +  I SKYP IKGINFDLPHVI+
Sbjct:    6 ETQMTPTQVSDEEAHLFAMQLASASVLPMILKTAIELDLLEIMAKAGPGAFLSTSEIASHLP-TKNPDAPVMLDRILRLLASYSILTCSLKDLPDGKVERLYGLAPVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYKGFEGLTSLVDVGGGTGAVVNTIVSKYPSIKGINFDLPHVIE 237          
BLAST of FC869128 vs. ExPASy Swiss-Prot
Match: COMT1_COFCA (Caffeic acid 3-O-methyltransferase OS=Coffea canephora PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 6.585e-64
Identity = 118/224 (52.68%), Postives = 161/224 (71.88%), Query Frame = 2
Query:   32 ARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV--DGSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQ 697
            A +E   +A  +   SVL M +K+ I L L E+IAKAGPGA +S SE+AAQLP T N +AP MLDRIL LLA+Y +++C ++++   G  RLYGL  V K+   N DGVS+ P+L + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G DPRFN+VF+  M NH+T+ ++KILE Y+GFE +K +VDVGG  G TL  I SKYP IKGINF+LPHV++
Sbjct:    2 AEEEACLFAMSLASASVLPMVLKSAIELDLLELIAKAGPGAYVSPSELAAQLP-THNPEAPIMLDRILRLLATYSVLDCKLNNLADGGVERLYGLAPVCKFLTKNADGVSMAPLLLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILEVYRGFEGLKTVVDVGGGTGATLNMIISKYPTIKGINFELPHVVE 224          
BLAST of FC869128 vs. ExPASy Swiss-Prot
Match: COMT3_POPKI (Caffeic acid 3-O-methyltransferase 3 OS=Populus kitakamiensis GN=HOMT3 PE=3 SV=1)

HSP 1 Score: 243.432 bits (620), Expect = 8.600e-64
Identity = 124/221 (56.11%), Postives = 157/221 (71.04%), Query Frame = 2
Query:   38 DENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVI 694
            DE   +A ++   SVL M +K  I L L EI+AKAGPGA LS S+IA+ LP TKN DAP MLDRIL LLASY I+ CS+ D+ DG   RLYGL  V K+   N+DGVS+ P+  + QDK  ++SW  LK+ I+EGG+PF++ +G  AFEY G DPRFN+VF+  M +H+ + ++KILE+YKGFE +  LVDVGG  G  +  I SKYP IKGINFDLPHVI
Sbjct:   16 DEEANFAMQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLSPSDIASHLP-TKNPDAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTKNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSKMAMKKILESYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVI 235          
BLAST of FC869128 vs. ExPASy Swiss-Prot
Match: COMT1_CATRO (Caffeic acid 3-O-methyltransferase OS=Catharanthus roseus GN=COMT1 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 1.916e-63
Identity = 119/230 (51.74%), Postives = 161/230 (70.00%), Query Frame = 2
Query:   14 ENMSNEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVD--GSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQ 697
            +N   +  +E    A  +   SVL M +K+ I L L E+I K+GPGA +S SE+AAQLP T+N DAP MLDRIL LLASY ++ C++ D+   G  RLY L  V K+   N+DGVS+  +L + QDK  ++SW  LK+ ++EGG+PF++ +G  AFEY G DPRFN+VF+  M NH+T++++KILE Y+GF+ +K +VDVGG  G TL  I SKYP IKGINFDLPHVI+
Sbjct:    9 KNSMTKEEEEACLSAMRLASASVLPMVLKSAIELDLLELIKKSGPGAYVSPSELAAQLP-TQNPDAPVMLDRILRLLASYSVLNCTLKDLPDGGIERLYSLAPVCKFLTKNEDGVSMAALLLMNQDKVLMESWYHLKDAVLEGGIPFNKAYGMTAFEYHGKDPRFNKVFNQGMSNHSTIIMKKILEIYQGFQGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIE 237          
BLAST of FC869128 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.719e-62
Identity = 122/233 (52.36%), Postives = 161/233 (69.10%), Query Frame = 2
Query:    5 EIQENMSNEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQ 697
            E Q   +  + +E   +A ++   SVL M +KA I L L EI+AKAGPG  LS ++IA+QLP TKN DAP MLDR+L LLASY I+  S+  + DG   RLYGL  V K+   N++GVS+ P+  + QDK  L+SW  LK+ ++EGG+PF++ +G  AFEY G DPRFN+VF+  M +H+T+ ++KILE YKGFE +  +VDVGG  G  L  I SKYP IKGINFDLPHVI+
Sbjct:    6 ETQMTPTQVSDEEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLP-TKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIE 237          
BLAST of FC869128 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 122/221 (55.20%), Postives = 154/221 (69.68%), Query Frame = 2
Query:   38 DENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVI 694
            DE   +A ++   SVL M +K  I L L EI+AKAGPGA L  S+IA+ LP TKN +AP MLDRIL LLASY I+ CS+ D+ DG   RLYGL  V K+   N+DGVS+ P+  + QDK  ++SW  LK+ I+EGG+PF++ +G  AFEY G DPRFN+VF+  M  H+ + ++KILE YKGFE +  LVDVGG  G  +  I SKYP IKGINFDLPHVI
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLP-TKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVI 235          
BLAST of FC869128 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 6.163e-62
Identity = 122/233 (52.36%), Postives = 162/233 (69.53%), Query Frame = 2
Query:    5 EIQENMSNEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSV-DDVDGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQ 697
            E Q   ++ + +E   +A ++   SVL M +K+ + L L EIIAKAGPGA++S  EIA+QLP T N DAP MLDR+L LLA Y I+ CSV    DG   RLYGL  V+KY V N+DGVS+  +  + QDK  ++SW  LK+ +++GG+PF++ +G  AFEY G DPRFN+VF+  M +H+T+ ++KILE Y GFE +K LVDVGG  G  +  I SKYP IKGINFDLPHVI+
Sbjct:    6 ETQITPTHISDEEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTT-NPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIE 237          
BLAST of FC869128 vs. ExPASy Swiss-Prot
Match: COMT1_OCIBA (Caffeic acid 3-O-methyltransferase 1 OS=Ocimum basilicum GN=COMT1 PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.049e-62
Identity = 116/226 (51.33%), Postives = 155/226 (68.58%), Query Frame = 2
Query:   26 NEARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDVD--GSHRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQ 697
            N   +ENF +A ++   SVL M +K+ I L L E+I K+G GA +S  ++AAQLP T N DA  MLDRIL LL SY I+EC +  +   G  RLYGL  V K+   N+DGVS+ P+  + QDK  ++SW  L + +++GG+PF++ +G  AFEY G DPRFN+VF+  M NH+T+ ++KILE Y GF+ +K +VDVGG  G TL  I SKYP IKGINFDLPHVI+
Sbjct:   11 NSDEEENFLFAMQLASASVLPMVLKSAIELDLLELIKKSGAGAFVSPVDLAAQLPTT-NPDAHVMLDRILRLLTSYAILECRLKTLPDGGVERLYGLAPVCKFLTKNEDGVSMAPLTLMNQDKVLMESWYHLSDAVVDGGIPFNKAYGMTAFEYHGTDPRFNKVFNQGMSNHSTITMKKILETYTGFDGLKTVVDVGGGTGATLNMIVSKYPSIKGINFDLPHVIE 235          
BLAST of FC869128 vs. ExPASy Swiss-Prot
Match: COMT1_CAPCH (Caffeic acid 3-O-methyltransferase OS=Capsicum chinense GN=COMT PE=2 SV=1)

HSP 1 Score: 236.884 bits (603), Expect = 8.049e-62
Identity = 117/225 (52.00%), Postives = 157/225 (69.78%), Query Frame = 2
Query:   29 EARDENFAYAFEVTMGSVLHMTMKAVINLGLFEIIAKAGPGAKLSASEIAAQLPATKNKDAPTMLDRILGLLASYGIVECSVDDV-DGS-HRLYGLNDVSKYFVPNQDGVSLGPVLALIQDKAFLDSWSQLKETIIEGGVPFDRVHGTNAFEYQGLDPRFNEVFSTAMYNHTTLVLQKILEAYKGFEHIKQLVDVGGSLGNTLKAITSKYPHIKGINFDLPHVIQ 697
            +  DE F +A ++   SVL M +KA + L L EI+AK+GPGA +S SE+AAQLP TKN +AP MLDR+  LLA+Y ++ C++  + DG   RLY L  V K+   N DGVS+ P+L + QDK  ++SW  L + +++GGVPF++ +G   FEY G DPRFN+VF+  M +HTTL ++KILE Y GFE +  +VDVGG  G T+  I SKYP IKGINFDLPHVI+
Sbjct:   10 QTEDEAFVFAMQLASASVLPMVLKATVELDLLEIMAKSGPGAFISPSELAAQLP-TKNPEAPVMLDRMFRLLATYSVLNCTLRTLPDGRVERLYSLAPVCKFLTKNGDGVSIAPILLMNQDKVLMESWYHLTDAVLDGGVPFNKAYGMTTFEYHGTDPRFNKVFNCGMSDHTTLSMKKILEDYTGFEGLNSIVDVGGGTGATVNMIVSKYPSIKGINFDLPHVIR 233          
The following BLAST results are available for this feature:
BLAST of FC869128 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 33
Match NameE-valueIdentityDescription
COMT1_POPKI5.956e-6554.51Caffeic acid 3-O-methyltransferase 1 OS=Populus ki... [more]
COMT1_POPTM1.327e-6454.08Caffeic acid 3-O-methyltransferase 1 OS=Populus tr... [more]
COMT1_COFCA6.585e-6452.68Caffeic acid 3-O-methyltransferase OS=Coffea canep... [more]
COMT3_POPKI8.600e-6456.11Caffeic acid 3-O-methyltransferase 3 OS=Populus ki... [more]
COMT1_CATRO1.916e-6351.74Caffeic acid 3-O-methyltransferase OS=Catharanthus... [more]
COMT1_PRUDU4.719e-6252.36Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT2_POPTM6.163e-6255.20Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_MEDSA6.163e-6252.36Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_OCIBA8.049e-6251.33Caffeic acid 3-O-methyltransferase 1 OS=Ocimum bas... [more]
COMT1_CAPCH8.049e-6252.00Caffeic acid 3-O-methyltransferase OS=Capsicum chi... [more]

Pages

back to top
Properties
Property NameValue
Genbank descriptionC31008G11EF AbioticL1 Citrus clementina cDNA clone C31008G11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869128 ID=FC869128; Name=FC869128; organism=Citrus clementina; type=EST; length=701bp
GAAGGAAATTCAAGAAAATATGTCTAATGAAGCGAGAGACGAAAACTTTG
CATATGCCTTTGAAGTGACGATGGGTTCAGTGCTCCACATGACCATGAAA
GCAGTAATTAATCTGGGACTTTTCGAGATCATAGCCAAAGCTGGTCCTGG
AGCAAAGCTCTCAGCTTCAGAGATTGCCGCTCAGTTGCCCGCCACGAAGA
ACAAAGACGCACCCACGATGCTGGACCGGATACTCGGGCTTCTGGCTAGC
TATGGCATTGTTGAATGCTCAGTTGATGATGTCGATGGTTCTCACAGGCT
ATACGGTTTGAATGATGTTTCCAAATACTTTGTGCCTAATCAAGATGGTG
TCTCATTAGGCCCTGTATTGGCCTTAATTCAGGACAAGGCCTTTCTCGAC
AGCTGGTCCCAACTGAAAGAAACTATTATTGAAGGAGGAGTTCCATTTGA
CCGAGTCCACGGAACGAACGCTTTCGAGTACCAAGGATTGGACCCCAGGT
TCAATGAAGTTTTCAGCACAGCAATGTACAACCATACCACTTTGGTCCTT
CAAAAGATCCTTGAGGCTTACAAGGGTTTCGAGCACATAAAGCAATTGGT
TGATGTTGGCGGTTCCCTTGGCAATACCCTTAAAGCAATTACTTCCAAGT
ATCCCCACATTAAGGGCATCAATTTCGACTTGCCTCACGTTATACAGCAT
T
back to top