FC869130
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869130 vs. ExPASy Swiss-Prot
Match: DHQSD_ARATH (Bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase, chloroplastic OS=Arabidopsis thaliana GN=EMB3004 PE=1 SV=1) HSP 1 Score: 260.381 bits (664), Expect = 1.324e-70 Identity = 134/190 (70.53%), Postives = 157/190 (82.63%), Query Frame = 2 Query: 41 TMESPNLLVASGS---KLVSGGMRKNPTLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSMEDLSNLVARIQASGADIVKFATTALDITDVARVF 601 +ME N+ VAS S ++ S + KNP+LIC P+M +S+DKMV++ KA+ GADLVEIRLD LK+FNP E++KT+IK+SP+PTLFTYRP WEGGQY+GDENER DVLRLAMELGADYIDVELQVA EF SI GKKP K KVIVSSHNYQ TPS+EDL LVARIQ +GADIVK ATTA+DI DVAR+F Sbjct: 67 SMEPSNVYVASNSTEMEIGSHDIVKNPSLICAPVMADSIDKMVIETSKAHELGADLVEIRLDWLKDFNPLEDLKTIIKKSPLPTLFTYRPKWEGGQYEGDENERRDVLRLAMELGADYIDVELQVASEFIKSIDGKKPGKFKVIVSSHNYQNTPSVEDLDGLVARIQQTGADIVKIATTAVDIADVARMF 256 HSP 2 Score: 27.7202 bits (60), Expect = 1.324e-70 Identity = 13/19 (68.42%), Postives = 14/19 (73.68%), Query Frame = 1 Query: 598 FPITVHSQVPIXGLVMGER 654 F IT +QVP GLVMGER Sbjct: 256 FHITSKAQVPTIGLVMGER 274
BLAST of FC869130 vs. ExPASy Swiss-Prot
Match: AROD_METTH (3-dehydroquinate dehydratase OS=Methanobacterium thermoautotrophicum GN=aroD PE=3 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 3.585e-21 Identity = 64/165 (38.79%), Postives = 97/165 (58.79%), Query Frame = 2 Query: 113 TLICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRE-NIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEKCKVIVSSHNYQYTPSMEDLSNLVARIQASGADIVKFATTALDITDVARVFQ 604 T ICVP+ ++ ++ G+A +GAD++EIR+DGL+ NP E NI+ LI++ P + T R EGG + G E+ER+ +L A E+ AD++D+EL ARE + + G + IVS HN++ TPS+E L +V + G DI K A ++ D V Q Sbjct: 3 TKICVPVFEKTAPEVTESAGRAIDAGADILEIRIDGLQ--NPGEVNIRELIEDIGFPVIATNRSPVEGGHFSGSEDERIKLLMAAAEV-ADFVDIELSSAREDIERVTGSAR---RSIVSYHNFRETPSLEALLRIVRMAKEMG-DIAKVAVMPENLADTLVVLQ 160
BLAST of FC869130 vs. ExPASy Swiss-Prot
Match: AROD_META3 (3-dehydroquinate dehydratase OS=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) GN=aroD PE=3 SV=1) HSP 1 Score: 95.9005 bits (237), Expect = 1.967e-19 Identity = 56/165 (33.94%), Postives = 98/165 (59.39%), Query Frame = 2 Query: 116 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSI---RGKKPEKCKVIVSSHNYQYTPSMEDLSNLVARIQASGADIVKFATTALDITDVARVF 601 +IC+P++ ++++ + +A AD+VE R D L++ + ++ + K + P++ T R WEGG+Y GD N+R+++ + A+E +ID+EL+ E N + R K K K+IVS H+++ TPS +DL +V + G DI KFAT A + D+ ++F Sbjct: 1 MICIPVIDKNINDALKSAEEA-LKVADIVEFRADLLESVDKQD----IEKMAKYPSIITIRADWEGGEYTGDNNKRIELYKTAIENNVKFIDIELK--EEKNKELVEFRNKIGSKTKIIVSYHDFEKTPSKQDLMEIVEKELKIG-DIAKFATMAQNKNDLLKIF 157
BLAST of FC869130 vs. ExPASy Swiss-Prot
Match: AROD_DESPS (3-dehydroquinate dehydratase OS=Desulfotalea psychrophila GN=aroD PE=3 SV=1) HSP 1 Score: 93.5893 bits (231), Expect = 9.762e-19 Identity = 53/140 (37.86%), Postives = 83/140 (59.29%), Query Frame = 2 Query: 188 GADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFNDSIRGKKPEK-CKVIVSSHNYQYTPSMEDLSNLVARIQASGADIVKFATTALDITDVARVFQ 604 GAD++E+RLD + I ++ LFT RP WEGG + G E +R+ +L A+ GA YID+EL+ A E + +R E+ ++I+S H+++ T ++ L+ ++ ++Q +GADI K TTA DV RVFQ Sbjct: 27 GADVIEVRLD----YIDVPEIDPFVESLATDLLFTCRPTWEGGLFAGTEEDRLALLAEAVRAGAAYIDLELRSAEESHQYLRTYLAERETELILSYHDFESTATLAKLTGIIDQMQDAGADIGKLITTANSAADVVRVFQ 162
BLAST of FC869130 vs. ExPASy Swiss-Prot
Match: AROD_METJA (3-dehydroquinate dehydratase OS=Methanocaldococcus jannaschii GN=aroD PE=3 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.845e-18 Identity = 58/168 (34.52%), Postives = 95/168 (56.55%), Query Frame = 2 Query: 116 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAR-----EFNDSIRGKKPEKCKVIVSSHNYQYTPSMEDLSNLVARIQASGADIVKFATTALDITDVARVFQ 604 +IC+P++ +SV+K + K AD+VE R+D LK + E+I+ K P + T R WEGG + G+ ER+++++ A+E A ++D+EL+ + +F D I K K+I+S H+++ TPS E L +V + + G DI KFAT A DV + + Sbjct: 1 MICLPVVEDSVEKAIKTAEKY-LEIADIVEFRIDMLKEVS-EEDIEKFAK---YPCIITVRADWEGGYWKGNNEERLNLIKKAIECNAKFVDIELREEKNKELVKFRDEI----GSKTKIIISYHDFEKTPSKEKLVEIVEKALSIG-DIAKFATMANSKEDVLNILE 158
BLAST of FC869130 vs. ExPASy Swiss-Prot
Match: AROD_METVS (3-dehydroquinate dehydratase OS=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) GN=aroD PE=3 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 6.328e-18 Identity = 55/164 (33.54%), Postives = 95/164 (57.93%), Query Frame = 2 Query: 116 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFN-DSIRGKKPEKCKVIVSSHNYQYTPSMEDLSNLVARIQASGADIVKFATTALDITDVARVFQ 604 +IC+PI+ +V+K ++ +A G D+VE RLD L N + + K + +P++ T R WEGG + N+R++ L+ A++ GA +IDVEL+ + + R + K K+IVS H+++ TP + +L ++V + G DI KFAT + DV ++ + Sbjct: 1 MICIPIIDNTVEKALISAKEALKYG-DIVEFRLDLLDNLTKFD----IEKFAKIPSIITIRANWEGGAWKESNNKRIEFLKHAIKHGAKFIDVELKEEKNLELVTYRNEIGSKTKIIVSYHDFEKTPEINELIDVVEKELKIG-DIAKFATFSNSKKDVLKILE 158
BLAST of FC869130 vs. ExPASy Swiss-Prot
Match: AROD_METM6 (3-dehydroquinate dehydratase OS=Methanococcus maripaludis (strain C6 / ATCC BAA-1332) GN=aroD PE=3 SV=1) HSP 1 Score: 88.1965 bits (217), Expect = 4.102e-17 Identity = 53/162 (32.72%), Postives = 92/162 (56.79%), Query Frame = 2 Query: 116 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFN-DSIRGKKPEKCKVIVSSHNYQYTPSMEDLSNLVARIQASGADIVKFATTALDITDVARV 598 +IC+P++ E+V + +A G D+VE R+D L + + + K S +P++ T R WEGG + +NER+++L+ A++ A +ID+EL+ R R + K K+IVS H+++ TP +++L ++V + G DI KFAT A D ++ Sbjct: 1 MICIPVIDENVSDAINSAKEALKYG-DIVEFRVDLLNDVT----FEDIEKFSKIPSILTIRAEWEGGAWKKSDNERIELLKYAIKNNAKFIDIELKEERNLELVKYRNEIGSKTKIIVSYHDFEKTPEIDELIDVVEKELKIG-DIAKFATFAHSKEDTLKI 156
BLAST of FC869130 vs. ExPASy Swiss-Prot
Match: AROD_METBF (3-dehydroquinate dehydratase OS=Methanosarcina barkeri (strain Fusaro / DSM 804) GN=aroD PE=3 SV=1) HSP 1 Score: 87.0409 bits (214), Expect = 9.137e-17 Identity = 52/150 (34.67%), Postives = 86/150 (57.33%), Query Frame = 2 Query: 173 KANASGADLVEIRLD--GLKNFNPR-ENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLR--LAMELGADYIDVELQVAREFNDS-IRGKKPEKCKVIVSSHNYQYTPSMEDLSNLVARIQASGADIVKFATTALDITDVARVFQ 604 KA GADL+EIRLD G+++ E I+ + E+ +P + T R I EGG+++G E +R+++L ++++ G D +D+EL RE D I+ K VIVSSH++ TP+ +++ ++ +GADI K A DV + + Sbjct: 29 KAAKMGADLLEIRLDLLGIRDLETAAETIRKVKSETGLPVILTNRSITEGGKWEGKEADRIELLTNLISLKDGPDAVDIELSAGREARDQVIKAAKAHGKTVIVSSHDFSRTPAFQEMKTILEEAFLAGADIAKLAVMPQSRRDVLNLLR 178
BLAST of FC869130 vs. ExPASy Swiss-Prot
Match: AROD_METMA (3-dehydroquinate dehydratase OS=Methanosarcina mazei GN=aroD PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.036e-16 Identity = 54/159 (33.96%), Postives = 89/159 (55.97%), Query Frame = 2 Query: 146 VDKMVVDMGKANASGADLVEIRLDGLKNFNPR---ENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVL--RLAMELGADYIDVELQVA-REFNDSIRGKKPEKCKVIVSSHNYQYTPSMEDLSNLVARIQASGADIVKFATTALDITDVARVFQ 604 ++K + + KA GAD++EIRLD L P E I+ + E+ +P + T R EGG++DG E +R +L L+++ G D ID+EL +E N I+ K + VIVSSH++ TP ++++ ++ + +GADI K A L + D + + Sbjct: 20 LEKPLENSKKAAEKGADILEIRLDLLGIRTPERAAEVIREIKAETGIPIIVTSRSGAEGGKWDGKEEDRTGLLINLLSLKDGPDAIDIELSAGMKERNRVIKAAKDRETAVIVSSHDFLKTPPLQNMRTIIEEMFLAGADIAKLAVMPLSVGDTLNLLR 178
BLAST of FC869130 vs. ExPASy Swiss-Prot
Match: AROD_METM7 (3-dehydroquinate dehydratase OS=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) GN=aroD PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.659e-16 Identity = 51/162 (31.48%), Postives = 91/162 (56.17%), Query Frame = 2 Query: 116 LICVPIMGESVDKMVVDMGKANASGADLVEIRLDGLKNFNPRENIKTLIKESPVPTLFTYRPIWEGGQYDGDENERVDVLRLAMELGADYIDVELQVAREFN-DSIRGKKPEKCKVIVSSHNYQYTPSMEDLSNLVARIQASGADIVKFATTALDITDVARV 598 +IC+P++ E+V + +A G D+VE R+D LK+ + + + S VP++ T R WEGG + +NER+++L+ A++ A ++D+EL+ R R + K+I+S H+++ TP +++L +V + G DI KFAT A D ++ Sbjct: 1 MICIPVIDENVCDAINSAKEALKYG-DIVEFRVDLLKDVT----FEDIEEFSKVPSIITIRAEWEGGNWKKSDNERIELLKHAIKNNAKFVDIELKEERNLELVKYRNESNSNTKIIISYHDFEKTPEIDELIEVVEKELKIG-DIAKFATFAHSKEDTLKI 156 The following BLAST results are available for this feature:
BLAST of FC869130 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 32
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869130 ID=FC869130; Name=FC869130; organism=Citrus clementina; type=EST; length=656bpback to top |