FC869135

Overview
NameFC869135
Unique NameFC869135
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length588
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC869135 vs. ExPASy Swiss-Prot
Match: Y3028_ARATH (Uncharacterized acetyltransferase At3g50280 OS=Arabidopsis thaliana GN=At3g50280 PE=1 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 7.341e-25
Identity = 75/194 (38.66%), Postives = 104/194 (53.61%), Query Frame = 1
Query:   22 SSTTIIPKCTVRP---DQKSRIKPLRLSVSDLPMLSCQYIQKGVLLTAPPFSITHFVSLLRQSLSVALSHFPALAGRFST-----DSDGHISILCNDTGVDFIHAKATFLSVNSLLSPI-DVPDSFKEFFAFDRTISYTGHVRPLAAVQVTELADGVFVGCTVNHAVTDGTSFWHFFNTFAEITKGAKKISKVP 576
            +  T I    VRP   +Q+ R K + L+  DL +L   Y Q+G+L   P    THF+S LR SLS AL  +   AGR +      D      I C+ +G  FIHA +  +SV+ LL P   VPD F+ F+  +   S  G   PL A+QVTE+ DGVF+G   NH V DG S W+FF T+++I    ++ +  P
Sbjct:    2 ADVTFISSSIVRPQIINQEGREK-IHLTPFDLNLLYVDYTQRGLLFPKPDPE-THFISRLRTSLSSALDIYFPFAGRLNKVENHEDETVSFYINCDGSGAKFIHAVSDSVSVSDLLRPDGSVPDFFRIFYPMNGVKSIDGLSEPLLALQVTEMRDGVFIGFGYNHMVADGASIWNFFRTWSKICSNGQRENLQP 193          
BLAST of FC869135 vs. ExPASy Swiss-Prot
Match: DCR_ARATH (BAHD acyltransferase DCR OS=Arabidopsis thaliana GN=DCR PE=2 SV=1)

HSP 1 Score: 98.5969 bits (244), Expect = 2.444e-20
Identity = 68/183 (37.16%), Postives = 95/183 (51.91%), Query Frame = 1
Query:   79 KPLRLSVSDLPMLSCQYIQKGVL--------LTAPPFSITHFVSLLRQSLSVALSHFPALAGRFSTDSDG--HISILCNDT---GVDFIHAKATFLSVNSLLSPIDVPDSFKEFFAFDRTISYTGHVRPLAAVQVTELADGVFVGCTVNHAVTDGTSFWHFFNTFAEITKGAKKISKVPDFSR 588
            K   L+  DLP L+  Y QK +L        L  P F     V  L+  L + L  F  LAG+ + D +G   +     D+   GV+F  A A  ++V+ L +  D    FKE   ++  ++  G  RPL AVQVT+L DG+ +G   NHAV DGTS WHF +++AEI +GA+ IS  P   R
Sbjct:   21 KQFHLTTFDLPYLAFYYNQKFLLYKFQNLLDLEEPTFQ-NEVVENLKDGLGLVLEDFYQLAGKLAKDDEGVFRVEYDAEDSEINGVEFSVAHAADVTVDDLTAE-DGTAKFKELVPYNGILNLEGLSRPLLAVQVTKLKDGLAMGLAFNHAVLDGTSTWHFMSSWAEICRGAQSISTQPFLDR 201          
The following BLAST results are available for this feature:
BLAST of FC869135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 2
Match NameE-valueIdentityDescription
Y3028_ARATH7.341e-2538.66Uncharacterized acetyltransferase At3g50280 OS=Ara... [more]
DCR_ARATH2.444e-2037.16BAHD acyltransferase DCR OS=Arabidopsis thaliana G... [more]
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Properties
Property NameValue
Genbank descriptionC31008H06EF AbioticL1 Citrus clementina cDNA clone C31008H06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869135 ID=FC869135; Name=FC869135; organism=Citrus clementina; type=EST; length=588bp
AAGCAAGCAAACATGCCTTCTTCTTCAACCACAATCATCCCCAAATGCAC
AGTGCGCCCCGATCAAAAATCAAGAATCAAGCCTCTCAGACTCTCTGTTT
CAGACCTCCCCATGCTCTCTTGCCAGTACATTCAAAAAGGCGTCCTCCTC
ACGGCCCCTCCATTTTCAATCACCCATTTCGTTTCATTGCTCAGGCAATC
ACTTTCGGTCGCTCTTTCCCACTTCCCCGCCCTCGCCGGCCGCTTCTCCA
CCGACTCCGACGGCCACATCAGCATCCTCTGCAACGATACGGGCGTCGAC
TTCATTCACGCCAAGGCCACTTTCCTTTCCGTCAACAGCCTCCTCTCGCC
CATCGACGTCCCCGATTCTTTCAAGGAGTTCTTCGCTTTTGACAGAACCA
TCAGCTACACCGGCCATGTCAGGCCCTTAGCCGCCGTCCAAGTGACGGAG
CTAGCTGACGGCGTCTTCGTCGGNTGTACGGTCAATCACGCCGTCACTGA
CGGTACCTCCTTTTGGCACTTCTTTAATACATTCGCCGAAATCACTAAAG
GCGCCAAGAAAATCTCGAAAGTTCCCGACTTCTCCCGC
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