FC869154
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869154 vs. ExPASy Swiss-Prot
Match: TOC34_PEA (Translocase of chloroplast 34 OS=Pisum sativum GN=TOC34 PE=1 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 2.599e-70 Identity = 131/189 (69.31%), Postives = 153/189 (80.95%), Query Frame = 3 Query: 84 MSMASQVIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCSKRSEALLNLL 650 M+ Q +REW GI F PATQT QE+VN+LTILVMGKGGVGKSSTVNSIIGE+ V++S FQSEGPRPVMVSRSRAGFTLNI+DTPGLIEGGY+N A+ +IK FLL+KTIDVLLYVDRLD YRVDNLDK + +AITD+FG+ IW +A++ LTHAQ S PDGL Y+ F SKRSEALL ++ Sbjct: 1 MASQQQTVREWSGINTFAPATQTKLLELLGNLKQEDVNSLTILVMGKGGVGKSSTVNSIIGERVVSISPFQSEGPRPVMVSRSRAGFTLNIIDTPGLIEGGYINDMALNIIKSFLLDKTIDVLLYVDRLDAYRVDNLDKLVAKAITDSFGKGIWNKAIVALTHAQFSPPDGLPYDEFFSKRSEALLQVV 189
BLAST of FC869154 vs. ExPASy Swiss-Prot
Match: TOC34_ARATH (Translocase of chloroplast 34, chloroplastic OS=Arabidopsis thaliana GN=TOC34 PE=1 SV=2) HSP 1 Score: 264.233 bits (674), Expect = 4.433e-70 Identity = 130/186 (69.89%), Postives = 155/186 (83.33%), Query Frame = 3 Query: 93 ASQVIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCSKRSEALLNLL 650 A Q +REW+GIQQFPPATQ+ +E+V++LT+LVMGKGGVGKSSTVNS+IGEKA VSTFQSEG RP +VSR+R+GFTLNI+DTPGLIEGGYVN AI +IKRFLLN TIDVLLYVDRLDVYRVD+LD+Q+ AITD FG++IWK++ +VLTHAQ S PDGL+Y F SKRS ALL ++ Sbjct: 3 ALQTLREWIGIQQFPPATQSKLLEILGKYKEEDVSSLTVLVMGKGGVGKSSTVNSVIGEKAAAVSTFQSEGLRPTLVSRTRSGFTLNIIDTPGLIEGGYVNDQAINIIKRFLLNMTIDVLLYVDRLDVYRVDDLDRQVVGAITDAFGKEIWKKSALVLTHAQFSPPDGLNYNHFVSKRSNALLKVI 188
BLAST of FC869154 vs. ExPASy Swiss-Prot
Match: TOC33_ARATH (Translocase of chloroplast 33, chloroplastic OS=Arabidopsis thaliana GN=TOC33 PE=1 SV=1) HSP 1 Score: 241.891 bits (616), Expect = 2.356e-63 Identity = 116/183 (63.39%), Postives = 146/183 (79.78%), Query Frame = 3 Query: 102 VIREWMGIQQFPPATQTXXXXXXXXXXQENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDGLDYEVFCSKRSEALLNLL 650 ++REW+G QQFP ATQ Q+++N++T+LV+GKGGVGKSSTVNS+IGE+ V VS FQ+EG RPVMVSR+ GFT+NI+DTPGL+E GYVN+ A++LIK FL+N+TIDVLLYVDRLDVYRVD LDKQ+ AIT FG++IW + L+VLTHAQ S PD L YE F SKRS++LL + Sbjct: 4 LVREWVGFQQFPAATQEKLIEFFGKLKQKDMNSMTVLVLGKGGVGKSSTVNSLIGEQVVRVSPFQAEGLRPVMVSRTMGGFTINIIDTPGLVEAGYVNHQALELIKGFLVNRTIDVLLYVDRLDVYRVDELDKQVVIAITQTFGKEIWCKTLLVLTHAQFSPPDELSYETFSSKRSDSLLKTI 186
BLAST of FC869154 vs. ExPASy Swiss-Prot
Match: TC120_ARATH (Translocase of chloroplast 120, chloroplastic OS=Arabidopsis thaliana GN=TOC120 PE=1 SV=1) HSP 1 Score: 100.523 bits (249), Expect = 8.478e-21 Identity = 55/162 (33.95%), Postives = 88/162 (54.32%), Query Frame = 3 Query: 204 TILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGG---YVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG-----LDYEVFCSKRSEALLNLLAPVPG 665 TI+V+GK GVGKS+T+NSI E ++ FQ + + G + ++DTPGL+ + N ++ ++ F+ D++LY+DRLD+ D+ D + R ITD FG IW A++ LTHA + PDG Y++F ++RS + + G Sbjct: 458 TIMVLGKSGVGKSATINSIFDELKISTDAFQVGTKKVQDIEGFVQGIKVRVIDTPGLLPSWSDQHKNEKILKSVRAFIKKSPPDIVLYLDRLDMQSRDSGDMPLLRTITDVFGPSIWFNAIVGLTHAASAPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAG 619
BLAST of FC869154 vs. ExPASy Swiss-Prot
Match: TC159_ARATH (Translocase of chloroplast 159, chloroplastic OS=Arabidopsis thaliana GN=TOC159 PE=1 SV=1) HSP 1 Score: 97.4413 bits (241), Expect = 7.177e-20 Identity = 57/169 (33.73%), Postives = 88/169 (52.07%), Query Frame = 3 Query: 183 QENVNTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGY---VNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG-----LDYEVFCSKRSEALLNLLAPVPG 665 +E + +L ILV+GK GVGKS+T+NSI+G + ++ F +S + G + +DTPGL N + +K+ + D++LYVDRLD D + + R IT + G IWK A++ LTHA + PDG L Y+VF ++ S + + G Sbjct: 850 EELIFSLNILVLGKAGVGKSATINSILGNQIASIDAFGLSTTSVREISGTVNGVKITFIDTPGLKSAAMDQSTNAKMLSSVKKVMKKCPPDIVLYVDRLDTQTRDLNNLPLLRTITASLGTSIWKNAIVTLTHAASAPPDGPSGTPLSYDVFVAQCSHIVQQSIGQAVG 1018
BLAST of FC869154 vs. ExPASy Swiss-Prot
Match: TC132_ARATH (Translocase of chloroplast 132, chloroplastic OS=Arabidopsis thaliana GN=TOC132 PE=1 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.224e-19 Identity = 57/162 (35.19%), Postives = 83/162 (51.23%), Query Frame = 3 Query: 204 TILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIEGGY---VNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPDG-----LDYEVFCSKRSEALLNLLAPVPG 665 TI+V+GK GVGKS+T+NSI E FQ R V G + ++DTPGL+ N + +K F+ D++LY+DRLD+ D+ D + R I+D FG IW A++ LTHA PDG Y++F ++RS + + G Sbjct: 576 TIMVLGKSGVGKSATINSIFDEVKFCTDAFQMGTKRVQDVEGLVQGIKVRVIDTPGLLPSWSDQAKNEKILNSVKAFIKKNPPDIVLYLDRLDMQSRDSGDMPLLRTISDVFGPSIWFNAIVGLTHAASVPPDGPNGTASSYDMFVTQRSHVIQQAIRQAAG 737
BLAST of FC869154 vs. ExPASy Swiss-Prot
Match: GTPA_DICDI (GTP-binding protein A OS=Dictyostelium discoideum GN=gtpA PE=3 SV=1) HSP 1 Score: 90.1225 bits (222), Expect = 1.146e-17 Identity = 50/135 (37.04%), Postives = 79/135 (58.52%), Query Frame = 3 Query: 195 NTLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGLIE--GGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLPD 593 N +L++G+ GVGKSST+N++ G + V + +S P SR GF LNI+DTPG ++ G V+ + + I+R+L KTI +L+V++ R D + + T+ G Q+W+ A +VLT+A LPD Sbjct: 150 NECNVLLLGRTGVGKSSTLNTVFGID-IPVHSSESCTQDPFTYSRVVNGFKLNIIDTPGFLDSQGELVDSNNMIKIQRYLSGKTIHCVLFVEKFTETRFDGAHQLVINQFTEKLGPQLWRNAAVVLTYANSVLPD 283
BLAST of FC869154 vs. ExPASy Swiss-Prot
Match: TOC90_ARATH (Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana GN=TOC90 PE=1 SV=1) HSP 1 Score: 81.6481 bits (200), Expect = 4.075e-15 Identity = 49/155 (31.61%), Postives = 81/155 (52.26%), Query Frame = 3 Query: 198 TLTILVMGKGGVGKSSTVNSIIGEKAVTVSTFQSEGPRPVMVSRSRAGFTLNIVDTPGL----IEGGYVNYHAIQLIKRFLLNKTIDVLLYVDRLDVYRVDNLDKQITRAITDNFGEQIWKRALIVLTHAQLSLP----DGLDYEVFCSKRSEAL 638 +L ILV+GK GVGKS+T+NSI G+ F+ R V + +G + +DTPG N + IKR++ + DV+LY+DRLD+ + D + + IT+ FG IW ++V+TH+ + ++YE + +R + + Sbjct: 166 SLRILVLGKTGVGKSATINSIFGQPKSETDAFRPGTDRIEEVMGTVSGVKVTFIDTPGFHPLSSSSTRKNRKILLSIKRYVKKRPPDVVLYLDRLDMIDMRYSDFSLLQLITEIFGAAIWLNTILVMTHSAATTEGRNGQSVNYESYVGQRMDVV 320 The following BLAST results are available for this feature:
BLAST of FC869154 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869154 ID=FC869154; Name=FC869154; organism=Citrus clementina; type=EST; length=681bpback to top |