FC869185

Overview
NameFC869185
Unique NameFC869185
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length654
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
FC869185_ssr40 microsatellite FC869185_ssr40:40..61. BLAST: Citrus ESTs to Prunus persica proteins V1
Ccv1_Contig3624 contig Ccv1_Contig3624:56..709. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKB70_WHEAT (70 kDa peptidyl-prolyl isomerase OS=Triticum aestivum GN=FKBP70 PE=2 SV=1)

HSP 1 Score: 219.935 bits (559), Expect = 8.947e-57
Identity = 118/193 (61.14%), Postives = 124/193 (64.25%), Query Frame = 3
Query:   84 MDEDFDIPAANEXXXXXXXXXXXXXX----KVGEEKEIGNQXXXXXXXXXXXXWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVXXXXXXXXXXXXXXXXXXXXXXSQDLDEVLVNYEARLEDGMVV 650
            MD+DFDIPA ++                  KVGEE EIG Q            WDTPE GDEVEVHYTGTLLDG +FDSSRDR   FKF LGQG VIKGWD GIKTMKKGENA+FTIPPELAYGESGSPPTIP NATLQFDVELLSWTSV                       +D DEV V YEARLEDG VV
Sbjct:    1 MDDDFDIPAGDDMMMGDGMGDFGGAEGPGMKVGEENEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKTMKKGENALFTIPPELAYGESGSPPTIPANATLQFDVELLSWTSVRDIAKDGGIFKKILKEGDKWENPKDPDEVFVKYEARLEDGTVV 193          

HSP 2 Score: 76.6406 bits (187), Expect = 1.223e-13
Identity = 43/97 (44.33%), Postives = 57/97 (58.76%), Query Frame = 3
Query:  231 WDTPENGDEVEVHYTGTLLDGTQF-DSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYG--ESGSPPTIPPNATLQFDVELLSW 512
            ++ P  G  V V  TG L DGT F     D   PF+F   +  VI+G D  +  MKKGE A+ TIPPE AYG  ES     +PPN+T+ ++VEL+S+
Sbjct:  287 YERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLNMKKGEVALVTIPPEYAYGSTESKQDAIVPPNSTVIYEVELVSF 383          

HSP 3 Score: 72.4034 bits (176), Expect = 2.307e-12
Identity = 38/102 (37.25%), Postives = 55/102 (53.92%), Query Frame = 3
Query:  231 WDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPP-----TIPPNATLQFDVELLSWTSV 521
            W+ P++ DEV V Y   L DGT    S       +FT+  G++       +KTMKKGE  +  + P+  +GE G P       +PPNA+L  D+EL+SW +V
Sbjct:  170 WENPKDPDEVFVKYEARLEDGTVVSKSEG----VEFTVKDGHLCPALAKAVKTMKKGEKVLLAVKPQYGFGEMGRPAAGEGGAVPPNASLVIDLELVSWKTV 267          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKB70_ARATH (70 kDa peptidyl-prolyl isomerase OS=Arabidopsis thaliana GN=ROF1 PE=1 SV=2)

HSP 1 Score: 216.853 bits (551), Expect = 7.574e-56
Identity = 113/164 (68.90%), Postives = 120/164 (73.17%), Query Frame = 3
Query:  162 KVGEEKEIGNQXXXXXXXXXXXXWDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSWTSVXXXXXXXXXXXXXXXXXXXXXXSQDLDEVLVNYEARLEDGMVVG 653
            KVGEEKEI  Q            ++TPENGDEVEVHYTGTLLDGT+FDSSRDR+TPFKFTLGQG VIKGWDIGIKTMKKGENAVFTIP ELAYGESGSPPTIP NATLQFDVELL W SV                       +DLDEVLV +EA+LEDG VVG
Sbjct:   29 KVGEEKEI-QQGLKKKLLKEGEGYETPENGDEVEVHYTGTLLDGTKFDSSRDRATPFKFTLGQGQVIKGWDIGIKTMKKGENAVFTIPAELAYGESGSPPTIPANATLQFDVELLKWDSVKDICKDGGVFKKILAVGEKWENPKDLDEVLVKFEAKLEDGTVVG 191          

HSP 2 Score: 73.559 bits (179), Expect = 1.036e-12
Identity = 38/102 (37.25%), Postives = 58/102 (56.86%), Query Frame = 3
Query:  231 WDTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPT-----IPPNATLQFDVELLSWTSV 521
            W+ P++ DEV V +   L DGT       +S   +FT+  G+        +KTMKKGE  + T+ P+  +GE G P +     +PPNATL+ ++EL+SW +V
Sbjct:  167 WENPKDLDEVLVKFEAKLEDGTVVG----KSDGVEFTVKDGHFCPALTKAVKTMKKGEKVLLTVKPQYGFGEKGKPASAGEGAVPPNATLEINLELVSWKTV 264          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKB59_DROME (FK506-binding protein 59 OS=Drosophila melanogaster GN=FKBP59 PE=1 SV=1)

HSP 1 Score: 120.168 bits (300), Expect = 9.648e-27
Identity = 53/93 (56.99%), Postives = 70/93 (75.27%), Query Frame = 3
Query:  234 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 512
            +TP +G  V +HYTG L+DGT+FDSS  R+ PF+F+LG+GNVIK +D+G+ TMK GE    T  P  AYG +GSPP IPP+ATL F++E+L W
Sbjct:   27 ETPHSGCTVSLHYTGRLVDGTEFDSSLSRNEPFEFSLGKGNVIKAFDMGVATMKLGERCFLTCAPNYAYGAAGSPPAIPPDATLIFELEMLGW 119          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP4_RABIT (FK506-binding protein 4 OS=Oryctolagus cuniculus GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 119.013 bits (297), Expect = 2.149e-26
Identity = 58/93 (62.37%), Postives = 65/93 (69.89%), Query Frame = 3
Query:  234 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 512
            +TP  GD V VHYTG LLDGT+FDSS DR   F F LG+G VIK WDI + TMK GE    T  PE AYG +GSPP IPPNATL F+VEL  +
Sbjct:   45 ETPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGELCRITCKPEYAYGSAGSPPKIPPNATLVFEVELFEF 137          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKB12_DROME (12 kDa FK506-binding protein OS=Drosophila melanogaster GN=FK506-bp2 PE=1 SV=2)

HSP 1 Score: 119.013 bits (297), Expect = 2.149e-26
Identity = 54/89 (60.67%), Postives = 66/89 (74.16%), Query Frame = 3
Query:  240 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 506
            P+NG +V VHYTGTL DGT+FDSSRDR+ PFKFT+G+G VI+GWD G+  +  G+ A     P+ AYG  G P  IPPN+TL FDVELL
Sbjct:   17 PKNGQKVTVHYTGTLDDGTKFDSSRDRNKPFKFTIGKGEVIRGWDEGVAQLSVGQRAKLICSPDYAYGSRGHPGVIPPNSTLTFDVELL 105          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP4_MOUSE (FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 PE=1 SV=5)

HSP 1 Score: 118.627 bits (296), Expect = 2.807e-26
Identity = 58/93 (62.37%), Postives = 65/93 (69.89%), Query Frame = 3
Query:  234 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 512
            +TP  GD V VHYTG LLDGT+FDSS DR   F F LG+G VIK WDI + TMK GE    T  PE AYG +GSPP IPPNATL F+VEL  +
Sbjct:   45 ETPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGAAGSPPKIPPNATLVFEVELFEF 137          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP4_BOVIN (FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=1 SV=4)

HSP 1 Score: 117.472 bits (293), Expect = 6.254e-26
Identity = 58/93 (62.37%), Postives = 65/93 (69.89%), Query Frame = 3
Query:  234 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 512
            +TP  GD V VHYTG LLDGT+FDSS DR   F F LG+G VIK WDI + TMK GE    T  PE AYG +GSPP IPPNATL F+VEL  +
Sbjct:   45 ETPMIGDRVFVHYTGWLLDGTKFDSSLDRKDRFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGLAGSPPKIPPNATLVFEVELFEF 137          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP4_HUMAN (FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 117.087 bits (292), Expect = 8.167e-26
Identity = 58/93 (62.37%), Postives = 64/93 (68.82%), Query Frame = 3
Query:  234 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 512
            + P  GD V VHYTG LLDGT+FDSS DR   F F LG+G VIK WDI I TMK GE    T  PE AYG +GSPP IPPNATL F+VEL  +
Sbjct:   45 EMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEF 137          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP4_RAT (FK506-binding protein 4 OS=Rattus norvegicus GN=Fkbp4 PE=1 SV=3)

HSP 1 Score: 115.931 bits (289), Expect = 1.820e-25
Identity = 57/93 (61.29%), Postives = 64/93 (68.82%), Query Frame = 3
Query:  234 DTPENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELLSW 512
            +T   GD V VHYTG LLDGT+FDSS DR   F F LG+G VIK WDI + TMK GE    T  PE AYG +GSPP IPPNATL F+VEL  +
Sbjct:   45 ETAMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAVATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEF 137          
BLAST of FC869185 vs. ExPASy Swiss-Prot
Match: FKBP_CRYNV (FK506-binding protein 1 OS=Cryptococcus neoformans var. grubii GN=FRR1 PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 5.294e-25
Identity = 51/89 (57.30%), Postives = 64/89 (71.91%), Query Frame = 3
Query:  240 PENGDEVEVHYTGTLLDGTQFDSSRDRSTPFKFTLGQGNVIKGWDIGIKTMKKGENAVFTIPPELAYGESGSPPTIPPNATLQFDVELL 506
            P+ GD V +HY GTLLDG++FDSSRDR TPF   +GQG VI+GWD G+  +  G+ A     P+ AYG  G PP IPPN+TL+F+VELL
Sbjct:   17 PQPGDNVTIHYVGTLLDGSKFDSSRDRGTPFVCRIGQGQVIRGWDEGVPQLSVGQKANLICTPDYAYGARGFPPVIPPNSTLKFEVELL 105          
The following BLAST results are available for this feature:
BLAST of FC869185 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 130
Match NameE-valueIdentityDescription
FKB70_WHEAT8.947e-5761.1470 kDa peptidyl-prolyl isomerase OS=Triticum aesti... [more]
FKB70_ARATH7.574e-5668.9070 kDa peptidyl-prolyl isomerase OS=Arabidopsis th... [more]
FKB59_DROME9.648e-2756.99FK506-binding protein 59 OS=Drosophila melanogaste... [more]
FKBP4_RABIT2.149e-2662.37FK506-binding protein 4 OS=Oryctolagus cuniculus G... [more]
FKB12_DROME2.149e-2660.6712 kDa FK506-binding protein OS=Drosophila melanog... [more]
FKBP4_MOUSE2.807e-2662.37FK506-binding protein 4 OS=Mus musculus GN=Fkbp4 P... [more]
FKBP4_BOVIN6.254e-2662.37FK506-binding protein 4 OS=Bos taurus GN=FKBP4 PE=... [more]
FKBP4_HUMAN8.167e-2662.37FK506-binding protein 4 OS=Homo sapiens GN=FKBP4 P... [more]
FKBP4_RAT1.820e-2561.29FK506-binding protein 4 OS=Rattus norvegicus GN=Fk... [more]
FKBP_CRYNV5.294e-2557.30FK506-binding protein 1 OS=Cryptococcus neoformans... [more]

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Properties
Property NameValue
Genbank descriptionC31009D11EF AbioticL1 Citrus clementina cDNA clone C31009D11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869185 ID=FC869185; Name=FC869185; organism=Citrus clementina; type=EST; length=654bp
TCGCCGGGGGCACGCATTTAGCATTTCCTCAATCAGCAGCTCTCTCTCTC
TCTCTCTCTCTTTCTCTCGTTCGTTAGAAGAAGATGGATGAGGATTTTGA
TATTCCAGCTGCGAATGAGATGGACGCGGACATGGATCTTCCCGACGATG
CTCCCATGATGAAGGTTGGGGAGGAGAAGGAGATCGGTAATCAAGGTTTG
AAGAAGAAGCTTGTCAAGGAAGGCGAAGGCTGGGACACTCCTGAAAATGG
CGACGAAGTTGAAGTTCATTATACTGGAACGTTGCTGGATGGTACTCAGT
TTGATTCCAGTCGTGATAGAAGCACTCCTTTTAAGTTCACGCTTGGTCAA
GGGAATGTGATTAAAGGATGGGACATAGGTATTAAGACTATGAAGAAAGG
TGAAAATGCTGTCTTCACCATTCCTCCTGAGCTTGCTTATGGTGAATCTG
GTTCACCACCGACCATTCCTCCAAATGCCACTCTTCAGTTTGATGTTGAA
TTACTATCTTGGACTAGTGTCAAGGACATTTGCAAGGACGGTGGGATTAT
TAAGAAGATCCTCAAGGAAGGAGAAAAATGGGAGAAATCCCAGGACCTTG
ATGAAGTTCTCGTTAACTACGAAGCTAGACTTGAGGATGGTATGGTTGTT
GGAA
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