FC869252
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: R13L1_ARATH (Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana GN=RPPL1 PE=2 SV=1) HSP 1 Score: 191.045 bits (484), Expect = 5.254e-48 Identity = 97/207 (46.86%), Postives = 140/207 (67.63%), Query Frame = 1 Query: 16 EIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIWELQEERCDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDASRFVMHDLINDLAHWAAGEIYFTMEYTSEVNKQQSFSRYLRHLSYIPEYYVGGKRFGDLYDIQHLRTFLPVMLTESS 636 ++ ++IV KC GLPLA +TLGG+LR + +WERVLS++IW+L ++ +++P LRVSYYYL A LK+CFAYCS+FPK + FE+ +++LLW A GFL + K E+LG E F EL SRS Q++ +R++MHD IN+LA +A+GE F+ ++ Q S R+LSY+ + Y F L +++ LRTFLP+ LT SS Sbjct: 361 DLAERIVHKCRGLPLAVKTLGGVLRFEGKVIEWERVLSSRIWDLPADKSNLLPVLRVSYYYLPAHLKRCFAYCSIFPKGHAFEKDKVVLLWMAEGFLQQTRSSKNLEELGNEYFSELESRSLLQKTK---TRYIMHDFINELAQFASGE--FSSKFEDGCKLQ--VSERTRYLSYLRDNYAEPMEFEALREVKFLRTFLPLSLTNSS 560
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: RGA3_SOLBU (Putative disease resistance protein RGA3 OS=Solanum bulbocastanum GN=RGA3 PE=2 SV=2) HSP 1 Score: 143.28 bits (360), Expect = 1.256e-33 Identity = 73/147 (49.66%), Postives = 102/147 (69.39%), Query Frame = 1 Query: 10 LEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIWELQEERCDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDASR--FVMHDLINDLA 444 L EI K+IV KC G+PLAA+TLGGLLR K + +WE V ++IW L ++ ++PALR+SY++L L+QCFAYC++FPKD + E+ +I LW A FL K + ED+G E++ EL+ RSFFQ+ + + F MHDLI+DLA Sbjct: 335 LMEIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWEHVRDSEIWNLPQDENSVLPALRLSYHHLPLDLRQCFAYCAVFPKDTKIEKEYLIALWMAHSFLLSKGNMEL-EDVGNEVWNELYLRSFFQEIEVKSGKTYFKMHDLIHDLA 480
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: RGA4_SOLBU (Putative disease resistance protein RGA4 OS=Solanum bulbocastanum GN=RGA4 PE=2 SV=1) HSP 1 Score: 140.198 bits (352), Expect = 1.064e-32 Identity = 72/147 (48.98%), Postives = 101/147 (68.71%), Query Frame = 1 Query: 10 LEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIWELQEERCDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQ--QSSNDASRFVMHDLINDLA 444 L I K+IV KC G+PLAA+TLGGLLR K + +WE V +IW L ++ I+PALR+SY++L L+QCFAYC++FPKD + + +I LW A GFL K + ED+G E++ EL+ RSFFQ ++ + + F +HDLI+DLA Sbjct: 337 LVAIGKEIVKKCGGVPLAAKTLGGLLRFKREESEWEHVRDNEIWSLPQDESSILPALRLSYHHLPLDLRQCFAYCAVFPKDTKMIKENLITLWMAHGFLLSKGNLEL-EDVGNEVWNELYLRSFFQEIEAKSGNTYFKIHDLIHDLA 482
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: RGA1_SOLBU (Putative disease resistance protein RGA1 OS=Solanum bulbocastanum GN=RGA1 PE=2 SV=2) HSP 1 Score: 138.272 bits (347), Expect = 4.042e-32 Identity = 70/147 (47.62%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 10 LEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIWELQEERCDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDASR--FVMHDLINDLA 444 L I K+IV KC G+PLAA+TLGG+LR K + +WE V + IW L ++ I+PALR+SY++L L+QCF YC++FPKD + + +I W A GFL K + ED+G E++ EL+ RSFFQ+ ++ + F MHDLI+DLA Sbjct: 335 LMAIGKEIVKKCGGVPLAAKTLGGILRFKREEREWEHVRDSPIWNLPQDESSILPALRLSYHHLPLDLRQCFVYCAVFPKDTKMAKENLIAFWMAHGFLLSKGNLEL-EDVGNEVWNELYLRSFFQEIEVESGKTYFKMHDLIHDLA 480
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: RGA2_SOLBU (Disease resistance protein RGA2 OS=Solanum bulbocastanum GN=RGA2 PE=1 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.620e-31 Identity = 73/147 (49.66%), Postives = 99/147 (67.35%), Query Frame = 1 Query: 10 LEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIWELQEERCDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQ--QSSNDASRFVMHDLINDLA 444 L I K+IV K G+PLAA+TLGG+L K + WE V + IW L ++ I+PALR+SY+ L LKQCFAYC++FPKD + E+ ++I LW A GFL K + ED+G E++KEL+ RSFFQ + + + F MHDLI+DLA Sbjct: 336 LVAIGKEIVKKSGGVPLAAKTLGGILCFKREERAWEHVRDSPIWNLPQDESSILPALRLSYHQLPLDLKQCFAYCAVFPKDAKMEKEKLISLWMAHGFLLSKGNMEL-EDVGDEVWKELYLRSFFQEIEVKDGKTYFKMHDLIHDLA 481
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: DRL21_ARATH (Putative disease resistance protein At3g14460 OS=Arabidopsis thaliana GN=At3g14460 PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 7.383e-26 Identity = 71/202 (35.15%), Postives = 102/202 (50.50%), Query Frame = 1 Query: 10 LEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIWELQEERCDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDASRFVMHDLINDLAHWAAGEIYFTMEYTSEVNKQQSFSRYLRHLSYIPEYYVGGKRFGDLYDIQHLRTFLP 615 LE I K+I +C GLPLAA+ + LR K + DW V I+P L++SY L LK+CFA CS+FPK + F+ E++LLW A L + + ED+G + +L ++SFFQ+ + FVMHDL+NDLA +G+ F + E + RH S+ F + + LRT LP Sbjct: 355 LEGIGKRIAEQCKGLPLAARAIASHLRSKPNPDDWYAVSKN----FSSYTNSILPVLKLSYDSLPPQLKRCFALCSIFPKGHVFDREELVLLWMAIDLLYQPRSSRRLEDIGNDYLGDLVAQSFFQRLDITMTSFVMHDLMNDLAKAVSGDFCFRL----EDDNIPEIPSTTRHFSFSRSQCDASVAFRSICGAEFLRTILP 548
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: DRL37_ARATH (Probable disease resistance protein At5g47250 OS=Arabidopsis thaliana GN=At5g47250 PE=2 SV=1) HSP 1 Score: 102.064 bits (253), Expect = 3.210e-21 Identity = 55/156 (35.26%), Postives = 79/156 (50.64%), Query Frame = 1 Query: 4 NLLEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIW---ELQEERCDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDASRFVMHDLINDLAHWAAGE 462 N + +I KKIVAKC GLPLA + + + K W R L T E++ I L++SY YL +CF YC+LFPK Y ++ E++ W GF+D K+ + +D G EI L +S+ + MHD+I D+A W E Sbjct: 332 NEISDIAKKIVAKCCGLPLALEVIRKTMASKSTVIQWRRALDTLESYRSEMKGTEKGIFQVLKLSYDYLKTKNAKCFLYCALFPKAYYIKQDELVEYWIGEGFIDEKDGRERAKDRGYEIIDNLVGAGLLLESN---KKVYMHDMIRDMALWIVSE 484
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: DRL3_ARATH (Probable disease resistance protein At1g15890 OS=Arabidopsis thaliana GN=At1g15890 PE=2 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.182e-17 Identity = 50/150 (33.33%), Postives = 76/150 (50.67%), Query Frame = 1 Query: 19 IRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERV---LSTKIWELQEERCDIMPALRVSYYYLS-APLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDASRFVMHDLINDLAHWAA 456 + +K+ KC GLPLA +G + ++ +W+ V L++ E I+P L+ SY L +K CF YCSLFP+DYE + E+I W GF+D E E + G +I L R+ ++ MHD+I ++A W A Sbjct: 407 LARKVAEKCCGLPLALSVIGKAMASRETVQEWQHVIHVLNSSSHEFPSMEEKILPVLKFSYDDLKDEKVKLCFLYCSLFPEDYEVRKEELIEYWMCEGFIDGNEDEDGANNKGHDIIGSL-VRAHLLMDGELTTKVKMHDVIREMALWIA 555
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: RPM1_ARATH (Disease resistance protein RPM1 OS=Arabidopsis thaliana GN=RPM1 PE=1 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.380e-16 Identity = 52/151 (34.44%), Postives = 78/151 (51.66%), Query Frame = 1 Query: 10 LEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWERVLSTKIWEL--QEERCDIMPALRVSYYYLSAPLKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQ----QSSNDASRFVMHDLINDLA 444 LE I +K+V +C GLPLA +LG ++ K +W++V ST WEL E + + +S+ L PLK+CF YCSLFP +Y + +I +W A F++ R E++ EL R+ Q F MHD+I ++A Sbjct: 362 LEPIARKLVERCQGLPLAIASLGSMMSTKKFESEWKKVYSTLNWELNNNHELKIVRSIMFLSFNDLPYPLKRCFLYCSLFPVNYRMKRKRLIRMWMAQRFVE-PIRGVKAEEVADSYLNELVYRNMLQVILWNPFGRPKAFKMHDVIWEIA 511
BLAST of FC869252 vs. ExPASy Swiss-Prot
Match: DRL1_ARATH (Probable disease resistance protein At1g12280 OS=Arabidopsis thaliana GN=At1g12280 PE=2 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 3.109e-16 Identity = 50/156 (32.05%), Postives = 77/156 (49.36%), Query Frame = 1 Query: 10 LEEIRKKIVAKCDGLPLAAQTLGGLLRGKDDRCDWER---VLSTKIWELQEERCDIMPALRVSYYYLSAP-LKQCFAYCSLFPKDYEFEEGEIILLWCASGFLDRKEREKTGEDLGLEIFKELHSRSFFQQSSNDASRFVMHDLINDLAHWAAGEI 465 + E+ +K+ KC GLPLA +G + K +W VLS+ E I+P L+ SY L+ +K CF YCSLFP+DY E+ +I W GF+D E + G EI L + + + + MHD++ ++A W A ++ Sbjct: 337 IPELARKVAGKCCGLPLALNVIGETMACKRMVQEWRNAIDVLSSYAAEFPGME-QILPILKYSYDNLNKEQVKPCFLYCSLFPEDYRMEKERLIDYWICEGFIDENESRERALSQGYEIIGILVRACLLLEEAINKEQVKMHDVVREMALWIASDL 491 The following BLAST results are available for this feature:
BLAST of FC869252 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 34
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Sequences
The
following sequences are available for this feature:
EST sequence >FC869252 ID=FC869252; Name=FC869252; organism=Citrus clementina; type=EST; length=719bpback to top |