FC869273

Overview
NameFC869273
Unique NameFC869273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length750
Libraries
Library NameType
AbioticL1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig14114 contig Ccv1_Contig14114:1..744. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC869273 vs. ExPASy Swiss-Prot
Match: ALFC_SPIOL (Fructose-bisphosphate aldolase, chloroplastic OS=Spinacia oleracea PE=1 SV=3)

HSP 1 Score: 304.294 bits (778), Expect = 4.599e-82
Identity = 158/201 (78.61%), Postives = 171/201 (85.07%), Query Frame = 2
Query:  152 PVLDKSEWVKGQAIR-QSTVSVRSLPSGPSSLTIRAGSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAQWRTVVSIPMAHLPWQSRKRL-GSCRYAA 748
            PVLD  E++KGQ +R  S   VR  PSG SSLT+RA SYADE VKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLL++APGLGQY+SGAILFEETLYQSTTDGKKMVDVL+EQ IVPGIKVDKG +PL GSNDESWCQGLDGLA R+AAYYQQGARFA+WRTVVSIP        ++   G  RYAA
Sbjct:   11 PVLDNPEFLKGQTLRIPSVAGVRFTPSGSSSLTVRASSYADELVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLISAPGLGQYVSGAILFEETLYQSTTDGKKMVDVLIEQGIVPGIKVDKGWLPLPGSNDESWCQGLDGLACRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAA 211          
BLAST of FC869273 vs. ExPASy Swiss-Prot
Match: ALFC1_ARATH (Probable fructose-bisphosphate aldolase 1, chloroplastic OS=Arabidopsis thaliana GN=FBA1 PE=1 SV=2)

HSP 1 Score: 294.664 bits (753), Expect = 3.644e-79
Identity = 157/200 (78.50%), Postives = 170/200 (85.00%), Query Frame = 2
Query:  164 KSEWVKGQAI---RQSTVSVRSLPSGPSSLTIRAGS-YADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAQWRTVVSIPMAHLPWQSRKRL-GSCRYAA 748
            KS+WVKGQ++   + S+VS       PS+LT+RA S YADE VKTAKT+ASPG GI+AMDESNATCGKRLASIGLENTEANRQAYRTLLV+APGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPL GS DESWCQGLDGLASRTAAYYQQGARFA+WRTVVSIP        ++   G  RYAA
Sbjct:   15 KSDWVKGQSLLLRQPSSVSAIRSHVAPSALTVRAASAYADELVKTAKTIASPGHGIMAMDESNATCGKRLASIGLENTEANRQAYRTLLVSAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLVGSYDESWCQGLDGLASRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAA 214          
BLAST of FC869273 vs. ExPASy Swiss-Prot
Match: ALFC2_ARATH (Probable fructose-bisphosphate aldolase 2, chloroplastic OS=Arabidopsis thaliana GN=FBA2 PE=1 SV=1)

HSP 1 Score: 293.893 bits (751), Expect = 6.216e-79
Identity = 157/203 (77.34%), Postives = 174/203 (85.71%), Query Frame = 2
Query:  152 PVLDKSEWVKGQAI--RQSTVSVRSLPSGPSSLTIRAGS-YADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAQWRTVVSIPMAHLPWQSRKRL-GSCRYAA 748
            PVLDKSEWVKGQ++  RQ + +   L +  +SLT+RA S YADE VKTAKT+ASPGRGILAMDESNATCGKRL SIGLENTEANRQA+RTLLV+APGLGQY+SGAILFEETLYQSTT+GKKMVDVLVEQNIVPGIKVDKGLVPL GSN+ESW QGLDGL+SRTAAYYQQGARFA+WRTVVSIP        ++   G  RYAA
Sbjct:   11 PVLDKSEWVKGQSVLFRQPSSASVVLRNRATSLTVRAASSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAFRTLLVSAPGLGQYVSGAILFEETLYQSTTEGKKMVDVLVEQNIVPGIKVDKGLVPLVGSNNESWGQGLDGLSSRTAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAA 213          
BLAST of FC869273 vs. ExPASy Swiss-Prot
Match: ALFC1_PEA (Fructose-bisphosphate aldolase 1, chloroplastic (Fragment) OS=Pisum sativum PE=1 SV=1)

HSP 1 Score: 278.87 bits (712), Expect = 2.069e-74
Identity = 142/170 (83.53%), Postives = 153/170 (90.00%), Query Frame = 2
Query:  242 LTIRAGSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAQWRTVVSIPMAHLPWQSRKRL-GSCRYAA 748
            LTIRAGSYADE VKTAKT+ASPGRGILAMDESNATCGKRLASIGLENTE NRQA+RTLLVT P LG+YISGAILFEETLYQSTTDG+K+VDVL+EQNI+PGIKVDKGLVPLAGSNDESWCQGLDGLASR+AAYYQQGARFA+WRTVVSIP        ++   G  RYAA
Sbjct:    2 LTIRAGSYADELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEVNRQAWRTLLVTVPTLGEYISGAILFEETLYQSTTDGRKIVDVLIEQNIIPGIKVDKGLVPLAGSNDESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAA 171          
BLAST of FC869273 vs. ExPASy Swiss-Prot
Match: ALFC_ORYSJ (Fructose-bisphosphate aldolase, chloroplastic OS=Oryza sativa subsp. japonica GN=Os11g0171300 PE=1 SV=2)

HSP 1 Score: 278.1 bits (710), Expect = 3.530e-74
Identity = 149/197 (75.63%), Postives = 160/197 (81.22%), Query Frame = 2
Query:  164 KSEW-VKGQAIRQSTVSVRSLPSGPSSLTIRAGSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAQWRTVVSIPMAHLPWQSRKRL-GSCRYAA 748
            KSEW    QA     V+V        S+ +RAG+Y DE VKTAKT+ASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQST DGKK+VD+L EQ IVPGIKVDKGLVPLAGSN+ESWCQGLDGLASR AAYYQQGARFA+WRTVVSIP        ++   G  RYAA
Sbjct:   15 KSEWGATRQAAAPKPVTV--------SMVVRAGAYDDELVKTAKTIASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTVDGKKIVDILTEQKIVPGIKVDKGLVPLAGSNNESWCQGLDGLASREAAYYQQGARFAKWRTVVSIPNGPSELAVKEAAWGLARYAA 203          
BLAST of FC869273 vs. ExPASy Swiss-Prot
Match: ALFC2_PEA (Fructose-bisphosphate aldolase 2, chloroplastic OS=Pisum sativum PE=1 SV=2)

HSP 1 Score: 266.159 bits (679), Expect = 1.388e-70
Identity = 136/165 (82.42%), Postives = 147/165 (89.09%), Query Frame = 2
Query:  257 GSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAQWRTVVSIPMAHLPWQSRKRL-GSCRYAA 748
            GSYADE VKTAKT+ASPGRGILAMDESNATCGKRL SIGLENTEANRQA+RTLLVT P LG+YISGAILFEETLYQST DG+K+VDVLVEQNI+PGIKVDKGLVPLAGSN+ESWCQGLDGLASR+AAYYQQGARFA+WRTVVSIP        ++   G  RYAA
Sbjct:    1 GSYADELVKTAKTIASPGRGILAMDESNATCGKRLDSIGLENTEANRQAWRTLLVTVPTLGEYISGAILFEETLYQSTVDGRKIVDVLVEQNIIPGIKVDKGLVPLAGSNNESWCQGLDGLASRSAAYYQQGARFAKWRTVVSIPNGPSALAVKEAAWGLARYAA 165          
BLAST of FC869273 vs. ExPASy Swiss-Prot
Match: ALFC3_ARATH (Probable fructose-bisphosphate aldolase 3, chloroplastic OS=Arabidopsis thaliana GN=FBA3 PE=1 SV=1)

HSP 1 Score: 254.218 bits (648), Expect = 5.458e-67
Identity = 132/195 (67.69%), Postives = 153/195 (78.46%), Query Frame = 2
Query:  167 SEWVKGQAIRQSTVSVRSLPSGPSSLTIRAGSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAQWRTVVSIPMAHLPWQSRKRL-GSCRYAA 748
            S W+  ++   ++ S  S P    S  IRAG+Y+DE VKTAK++ASPGRGILA+DESNATCGKRLASIGL+NTE NRQAYR LL+T PGLG YISG+ILFEETLYQST DGK  VD L + NIVPGIKVDKGL PLAGSN+ESWCQGLDGLASR+A YY+QGARFA+WRTVVS+P        ++   G  RYAA
Sbjct:   14 SPWIGQRSFAHTSAS--SSPPPRVSFAIRAGAYSDELVKTAKSIASPGRGILAIDESNATCGKRLASIGLDNTEDNRQAYRQLLLTTPGLGDYISGSILFEETLYQSTKDGKTFVDCLRDANIVPGIKVDKGLSPLAGSNEESWCQGLDGLASRSAEYYKQGARFAKWRTVVSVPCGPSALAVKEAAWGLARYAA 206          
BLAST of FC869273 vs. ExPASy Swiss-Prot
Match: ALFC_CHLRE (Fructose-bisphosphate aldolase 1, chloroplastic OS=Chlamydomonas reinhardtii GN=ALDCHL PE=2 SV=1)

HSP 1 Score: 217.238 bits (552), Expect = 7.394e-56
Identity = 117/164 (71.34%), Postives = 126/164 (76.83%), Query Frame = 2
Query:  257 GSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAQWRTVVSIPMAHLPWQSRKRLGSCRYAA 748
            G Y +E +KTA TVAS GRGILAMDESNATCGKRL SIG+ENTE NR+AYR LLVTAPGLGQYISGAILFEETLYQST  GKK VDV+ EQNIVPGIKVDKGLVP   +   SWC GLDG  S  A YY+ GARFA+WR+VVSIP        R   G  RYAA
Sbjct:   28 GKYDEELIKTAGTVASKGRGILAMDESNATCGKRLDSIGVENTEENRRAYRELLVTAPGLGQYISGAILFEETLYQSTASGKKFVDVMKEQNIVPGIKVDKGLVP-CPTPTMSWCMGLDGWTS-AAEYYKAGARFAKWRSVVSIPHGPSIMLPRLAYGLARYAA 189          
BLAST of FC869273 vs. ExPASy Swiss-Prot
Match: ALF_ARATH (Fructose-bisphosphate aldolase, cytoplasmic isozyme OS=Arabidopsis thaliana GN=At4g26520 PE=2 SV=2)

HSP 1 Score: 180.644 bits (457), Expect = 7.669e-45
Identity = 89/142 (62.68%), Postives = 106/142 (74.65%), Query Frame = 2
Query:  263 YADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAQWRTVVSI 688
            Y DE +KTAK +A+PGRGILA DES  T GKR A I +ENTE+NRQAYR LL T+PG    +SG ILFEETLYQ T+DGK  VD+L+E  ++PGIKVDKGLV LAG+N E+  QGLD L +R   YY+ GARFA+WR    I
Sbjct:    8 YEDELIKTAKYIATPGRGILAADESTETIGKRFAGINVENTESNRQAYRELLFTSPGSYPCLSGVILFEETLYQKTSDGKPFVDLLMENGVIPGIKVDKGLVDLAGTNGETTTQGLDSLGARCQQYYEAGARFAKWRAFFKI 149          
BLAST of FC869273 vs. ExPASy Swiss-Prot
Match: ALF1_PEA (Fructose-bisphosphate aldolase, cytoplasmic isozyme 1 OS=Pisum sativum PE=2 SV=1)

HSP 1 Score: 179.489 bits (454), Expect = 1.709e-44
Identity = 87/144 (60.42%), Postives = 109/144 (75.69%), Query Frame = 2
Query:  257 GSYADEPVKTAKTVASPGRGILAMDESNATCGKRLASIGLENTEANRQAYRTLLVTAPGLGQYISGAILFEETLYQSTTDGKKMVDVLVEQNIVPGIKVDKGLVPLAGSNDESWCQGLDGLASRTAAYYQQGARFAQWRTVVSI 688
            G YADE +K AK +A+PG+GILA DES  T GKRLASI +EN EANRQA R LL T+P   QY+SG ILFEETLYQ +++GK  V++L E N++PGIKVDKG+V LAG++ E+  QG D L +R   YY+ GARFA+WR V+ I
Sbjct:    6 GKYADELIKNAKYIATPGKGILAADESTGTIGKRLASINVENIEANRQALRELLFTSPNALQYLSGVILFEETLYQKSSEGKPFVEILQENNVIPGIKVDKGVVELAGTDGETTTQGFDSLGARCQQYYKAGARFAKWRAVLKI 149          
The following BLAST results are available for this feature:
BLAST of FC869273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 56
Match NameE-valueIdentityDescription
ALFC_SPIOL4.599e-8278.61Fructose-bisphosphate aldolase, chloroplastic OS=S... [more]
ALFC1_ARATH3.644e-7978.50Probable fructose-bisphosphate aldolase 1, chlorop... [more]
ALFC2_ARATH6.216e-7977.34Probable fructose-bisphosphate aldolase 2, chlorop... [more]
ALFC1_PEA2.069e-7483.53Fructose-bisphosphate aldolase 1, chloroplastic (F... [more]
ALFC_ORYSJ3.530e-7475.63Fructose-bisphosphate aldolase, chloroplastic OS=O... [more]
ALFC2_PEA1.388e-7082.42Fructose-bisphosphate aldolase 2, chloroplastic OS... [more]
ALFC3_ARATH5.458e-6767.69Probable fructose-bisphosphate aldolase 3, chlorop... [more]
ALFC_CHLRE7.394e-5671.34Fructose-bisphosphate aldolase 1, chloroplastic OS... [more]
ALF_ARATH7.669e-4562.68Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]
ALF1_PEA1.709e-4460.42Fructose-bisphosphate aldolase, cytoplasmic isozym... [more]

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Properties
Property NameValue
Genbank descriptionC31010D10EF AbioticL1 Citrus clementina cDNA clone C31010D10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC869273 ID=FC869273; Name=FC869273; organism=Citrus clementina; type=EST; length=750bp
CCGGGCCGGGGGGAAAGAGGCAGAAGAAAGATCAGTGAAGATAAGATTAT
AAGTGCTATAAGCTAAGGCCTCTCGAGCTCAGAACCCACAGCAAGAAGAA
GCAAAGAGGAAAATGGCCTCAGCCTCGGCATCTTTACTCAAGTCATCATC
CCCCGTTCTTGACAAGTCTGAGTGGGTTAAGGGCCAGGCCATCCGCCAGT
CTACTGTCTCAGTCCGCAGCCTCCCCAGTGGCCCCTCTTCCCTCACCATC
CGTGCTGGTTCCTATGCCGATGAGCCTGTCAAGACCGCGAAAACTGTTGC
ATCACCAGGACGTGGAATTTTGGCCATGGATGAGTCAAATGCAACTTGTG
GAAAACGCCTTGCCTCAATTGGGTTAGAGAACACTGAGGCTAACCGCCAG
GCATACCGTACCCTCCTTGTTACAGCCCCTGGTCTTGGACAGTACATCTC
TGGTGCCATCCTTTTTGAGGAGACTCTCTACCAATCCACCACCGATGGCA
AGAAGATGGTCGATGTTCTTGTTGAGCAAAACATTGTCCCCGGTATCAAA
GTCGACAAGGGTTTGGTGCCCCTTGCTGGTTCCAATGATGAGTCATGGTG
CCAGGGTCTTGATGGCCTGGCTTCTCGCACTGCTGCTTACTACCAACAGG
GAGCTCGTTTCGCCCAATGGCGTACTGTTGTGAGCATTCCCATGGCCCAT
CTGCCTTGGCAGTCAAGGAAGCGCCTGGGGTCTTGCCGCTATGCTGCCAT
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