FC869277
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC869277 vs. ExPASy Swiss-Prot
Match: LOXC1_ORYSJ (Lipoxygenase 7, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX1 PE=2 SV=2) HSP 1 Score: 106.301 bits (264), Expect = 1.682e-22 Identity = 57/117 (48.72%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 383 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL---DGLPNGPV-NVTCNSWLHSK----HDNKQKRVFFTNKLYLPSXTPDGL 709 VS+ELD KTG +K+T++ YA + D + YE++F+VPSGFG IGAI+V NE +EM+L+DI L DG N V + CNSW+ K KR+FF NK YLP TP GL Sbjct: 119 VSSELDAKTGKEKATVRSYAHNVDDDDHSVVTYEADFDVPSGFGPIGAIIVTNELRQEMFLEDINLTASDGAGNSTVLPIRCNSWVQPKSVGDEGTPSKRIFFANKTYLPGQTPAGL 235
BLAST of FC869277 vs. ExPASy Swiss-Prot
Match: LOX23_HORVU (Lipoxygenase 2.3, chloroplastic OS=Hordeum vulgare GN=LOX2.3 PE=1 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.429e-21 Identity = 50/111 (45.05%), Postives = 72/111 (64.86%), Query Frame = 2 Query: 383 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDI--VLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSXTPDGL 709 VS+ELDPKTG ++ ++ +A +G YE++ VP+ FG +GA+LVENEHH+EM++KDI + G + + SW+HSK D+ + R FFT K YLPS TP G+ Sbjct: 106 VSSELDPKTGRERERVKGFAHMTLKEGT----YEAKMSVPASFGPVGAVLVENEHHREMFIKDIKLITGGDESTAITFDVASWVHSKFDDPEPRAFFTVKSYLPSQTPPGI 212
BLAST of FC869277 vs. ExPASy Swiss-Prot
Match: LOX3_ARATH (Lipoxygenase 3, chloroplastic OS=Arabidopsis thaliana GN=LOX3 PE=2 SV=1) HSP 1 Score: 101.679 bits (252), Expect = 4.142e-21 Identity = 49/113 (43.36%), Postives = 73/113 (64.60%), Query Frame = 2 Query: 383 VSAELDPKTGLDKST----IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSXTPDGL 709 +S +LDPKT L K + ++D+++K + + Y +EF V + FG GAI V N+H KE +L+ I ++G GPV+ CNSW+ S+ D+ KR+FFTN+ YLP+ TP GL Sbjct: 124 ISTQLDPKTKLPKKSNAAVLKDWSKKSKTKAE-RVHYTAEFTVDAAFGSPGAITVMNKHQKEFFLESITIEGFALGPVHFPCNSWVQSQKDHPDKRIFFTNQPYLPNETPSGL 235
BLAST of FC869277 vs. ExPASy Swiss-Prot
Match: LOX6_ORYSJ (Probable lipoxygenase 6 OS=Oryza sativa subsp. japonica GN=Os03g0179900 PE=2 SV=2) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 53/115 (46.09%), Postives = 76/115 (66.09%), Query Frame = 2 Query: 383 VSAELDPKTGLD----KSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDG--LPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSXTPDGL 709 +S ++ P+T + +I+D+ +K GA GD ++ Y +EF V + FGE GAI V N H++E +L+ IV++G LP GPV+ CNSW+ S + KRVFF+NK YLPS TP GL Sbjct: 118 ISTKIHPRTKKPMQSGRVSIKDWCQKRGAKGD-HVVYTAEFTVDADFGEPGAIAVANRHNREFFLESIVVEGGGLPCGPVHFACNSWVQSTRELPTKRVFFSNKPYLPSETPPGL 231
BLAST of FC869277 vs. ExPASy Swiss-Prot
Match: LOX4_ARATH (Lipoxygenase 4, chloroplastic OS=Arabidopsis thaliana GN=LOX4 PE=2 SV=1) HSP 1 Score: 99.3673 bits (246), Expect = 2.056e-20 Identity = 48/113 (42.48%), Postives = 72/113 (63.72%), Query Frame = 2 Query: 383 VSAELDPKTGLDKST----IQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSXTPDGL 709 +S ++DPKT K + ++D+++K + + + Y +EF V S FG GAI V N+H KE +L+ I ++G GPV+ CNSW+ S+ D+ KR+ FTN+ YLPS TP GL Sbjct: 130 MSTQVDPKTNEPKKSKAAVLKDWSKKSNSKAE-RVHYTAEFTVDSAFGSPGAITVTNKHQKEFFLESITIEGFACGPVHFPCNSWVQSQKDHPSKRILFTNQPYLPSETPSGL 241
BLAST of FC869277 vs. ExPASy Swiss-Prot
Match: LOXC2_ORYSJ (Probable lipoxygenase 8, chloroplastic OS=Oryza sativa subsp. japonica GN=CM-LOX2 PE=2 SV=1) HSP 1 Score: 96.6709 bits (239), Expect = 1.333e-19 Identity = 54/117 (46.15%), Postives = 74/117 (63.25%), Query Frame = 2 Query: 383 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL---DGLPNGPV-NVTCNSWLHSKHDNKQ----KRVFFTNKLYLPSXTPDGL 709 VS+EL+ KTG K+T+ YA K+ D G + YE++F+VP+GFG IGA++V NE +EM+L+D+ L DG N V + CNSW+ K + KR+FF K YLP TP GL Sbjct: 137 VSSELEAKTGKKKATVHSYAHKVDDDDHGVVTYEADFDVPTGFGPIGAVVVTNELGQEMFLEDLNLTAGDGAGNSTVLPIRCNSWVQPKSSIDEGTPGKRIFFA-KAYLPGQTPAGL 252
BLAST of FC869277 vs. ExPASy Swiss-Prot
Match: LOX5_ORYSJ (Putative lipoxygenase 5 OS=Oryza sativa subsp. japonica GN=Os04g0447100 PE=3 SV=2) HSP 1 Score: 95.9005 bits (237), Expect = 2.273e-19 Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 2 Query: 383 VSAELDPKTGLDK----STIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSXTPDGL 709 VS E DP+ G K S + + K + + Y +EF V +GFGE GA+ V N H +E Y++ IV++G P GP + TCNSW+ ++ +RVFF+N+ YLPS TP GL Sbjct: 106 VSTETDPRKGTPKKSKPSALVGWFDKKDVKAE-RVVYTAEFAVDAGFGEPGAVTVLNRHQREFYIESIVVEGFPTGPAHFTCNSWVQPTRVSRDRRVFFSNRPYLPSETPPGL 217
BLAST of FC869277 vs. ExPASy Swiss-Prot
Match: LOX2_ARATH (Lipoxygenase 2, chloroplastic OS=Arabidopsis thaliana GN=LOX2 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.924e-18 Identity = 44/109 (40.37%), Postives = 72/109 (66.06%), Query Frame = 2 Query: 383 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSXTPDGL 709 +SA+ D + T++DYA+++ A+ +YE EFE+P FG +GAI ++N++H++++LK + L LP G + TC SW+ K + KR+FF++K YLPS TP+ L Sbjct: 111 ISAKTDQRI-----TVEDYAQRVWAEAPDE-KYECEFEMPEDFGPVGAIKIQNQYHRQLFLKGVELK-LPGGSITFTCESWVAPKSVDPTKRIFFSDKSYLPSQTPEPL 212
BLAST of FC869277 vs. ExPASy Swiss-Prot
Match: LOX21_HORVU (Lipoxygenase 2.1, chloroplastic OS=Hordeum vulgare GN=LOX2.1 PE=1 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 3.629e-17 Identity = 48/111 (43.24%), Postives = 60/111 (54.05%), Query Frame = 2 Query: 383 VSAELDPKTGLDKSTIQDYARKIGADGDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVL--DGLPNGPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSXTPDGL 709 VS+ELDP+TG ++ I + G D YE+ F+VP+ FG IGA+ V N HH EM L DI + G V C SW+ H KRVFF YLPS TP G+ Sbjct: 120 VSSELDPQTGQEREPISGAVKHSGRVDDEWDMYEATFKVPASFGPIGAVQVTNYHHSEMLLGDIEVFPTGQEESAVTFHCKSWIDPSHCTPDKRVFFPAHSYLPSQTPKGV 230
BLAST of FC869277 vs. ExPASy Swiss-Prot
Match: LOX4_SOYBN (Lipoxygenase-4 OS=Glycine max GN=LOX1.5 PE=1 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 34/81 (41.98%), Postives = 48/81 (59.26%), Query Frame = 2 Query: 461 GDGNMQYESEFEVPSGFGEIGAILVENEHHKEMYLKDIVLDGLPN-GPVNVTCNSWLHSKHDNKQKRVFFTNKLYLPSXTP 700 G G Y+ FE S FG GA ++N E YLK ++L+ +PN G ++ CNSW+++ + K R+FF N YLPS TP Sbjct: 89 GAGEQAYDVNFEWDSDFGIPGAFYIKNFMQNEFYLKSLILEDIPNHGTIHFVCNSWVYNSKNYKTDRIFFANNTYLPSETP 169 The following BLAST results are available for this feature:
BLAST of FC869277 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 13
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC869277 ID=FC869277; Name=FC869277; organism=Citrus clementina; type=EST; length=709bpback to top |