FC870246
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 93.2041 bits (230), Expect = 1.203e-18 Identity = 38/70 (54.29%), Postives = 52/70 (74.29%), Query Frame = 3 Query: 12 DVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 221 D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ +M Sbjct: 249 DQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTM 318
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 92.8189 bits (229), Expect = 1.571e-18 Identity = 39/61 (63.93%), Postives = 47/61 (77.05%), Query Frame = 3 Query: 12 DVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 194 D AGR PGYG+ TNI+NGG+ECG+G +D V NRIGF+ +CG FGI G NLDC NQRP+ Sbjct: 269 DAAAGRAPGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHI3_ORYSJ (Chitinase 3 OS=Oryza sativa subsp. japonica GN=Cht3 PE=2 SV=2) HSP 1 Score: 92.0485 bits (227), Expect = 2.680e-18 Identity = 39/64 (60.94%), Postives = 49/64 (76.56%), Query Frame = 3 Query: 3 AANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPY 194 +A+D AGR+PGYG TNIINGG+ECG+G +D V +RIGF+ +C G+ GDNLDC NQRPY Sbjct: 254 SADDQAAGRVPGYGEITNIINGGVECGHGADDKVADRIGFYKRYCDMLGVSYGDNLDCYNQRPY 317
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 92.0485 bits (227), Expect = 2.680e-18 Identity = 37/73 (50.68%), Postives = 53/73 (72.60%), Query Frame = 3 Query: 3 AANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 221 + D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ ++ Sbjct: 244 SGTDQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 316
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 91.6633 bits (226), Expect = 3.500e-18 Identity = 37/70 (52.86%), Postives = 52/70 (74.29%), Query Frame = 3 Query: 12 DVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 221 D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PGDNLDC NQR +G L+ ++ Sbjct: 249 DQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGDNLDCGNQRSFGNGLLVDTV 318
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 4.571e-18 Identity = 39/65 (60.00%), Postives = 49/65 (75.38%), Query Frame = 3 Query: 3 AANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 197 +A D A R+PGYG+ TNIINGGIECG G NDAV +RIG++ +CG + PG+NLDC NQR +G Sbjct: 187 SAADQAANRVPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHI1_TOBAC (Endochitinase A OS=Nicotiana tabacum GN=CHN48 PE=1 SV=2) HSP 1 Score: 91.2781 bits (225), Expect = 4.571e-18 Identity = 39/73 (53.42%), Postives = 52/73 (71.23%), Query Frame = 3 Query: 3 AANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 221 +A D A RLPG+G+ TNIINGG+ECG G + V++RIGF+ +C G+ PGDNLDC NQR +G L+ +M Sbjct: 257 SAGDRAANRLPGFGVITNIINGGLECGRGTDSRVQDRIGFYRRYCSILGVSPGDNLDCGNQRSFGNGLLVDTM 329
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 90.8929 bits (224), Expect = 5.970e-18 Identity = 38/65 (58.46%), Postives = 49/65 (75.38%), Query Frame = 3 Query: 3 AANDVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYG 197 +A D AGRLPGYG+ TN++NGG+ECG G N V +R+GFF +CG G+ G+NLDC NQRP+G Sbjct: 179 SAADTAAGRLPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 7.797e-18 Identity = 37/70 (52.86%), Postives = 51/70 (72.86%), Query Frame = 3 Query: 12 DVNAGRLPGYGLTTNIINGGIECGYGGNDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLMAQSM 221 D A R+PG+G+ TNIINGG+ECG+G + V++RIGF+ +CG G+ PG+NLDC NQR +G L+ M Sbjct: 253 DQAANRVPGFGVITNIINGGLECGHGSDSRVQDRIGFYRRYCGILGVSPGENLDCGNQRSFGNGLLVDIM 322
BLAST of FC870246 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 7.797e-18 Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 3 Query: 3 AANDVNAGRLPGYGLTTNIINGGIECGYGG-NDAVRNRIGFFTTFCGKFGIQPGDNLDCSNQRPYGLNLM 209 +A D AGR+PGYG+ TNIINGGIECG GG N+A NRIGF+ T+C G G NLDC QRP+G L+ Sbjct: 228 SAADSEAGRVPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGLL 297 The following BLAST results are available for this feature:
BLAST of FC870246 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 42
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870246 ID=FC870246; Name=FC870246; organism=Citrus clementina; type=EST; length=638bpback to top |