FC870253

Overview
NameFC870253
Unique NameFC870253
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length880
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC28_ARATH (Ubiquitin carrier protein E2 28 OS=Arabidopsis thaliana GN=UBC28 PE=2 SV=1)

HSP 1 Score: 303.908 bits (777), Expect = 7.809e-82
Identity = 142/148 (95.95%), Postives = 147/148 (99.32%), Query Frame = 2
Query:  203 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYAMG 646
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPN+NSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD+PLVPEIAHMY +D+AKYESTARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYESTARSWTQKYAMG 148          
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC10_ARATH (Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis thaliana GN=UBC10 PE=1 SV=1)

HSP 1 Score: 302.753 bits (774), Expect = 1.740e-81
Identity = 143/148 (96.62%), Postives = 146/148 (98.65%), Query Frame = 2
Query:  203 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYAMG 646
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPS+SPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD+PLVPEIAHMY +DK KYESTARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARSWTQKYAMG 148          
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC9_ARATH (SUMO-conjugating enzyme UBC9 OS=Arabidopsis thaliana GN=UBC9 PE=1 SV=1)

HSP 1 Score: 301.982 bits (772), Expect = 2.968e-81
Identity = 142/148 (95.95%), Postives = 146/148 (98.65%), Query Frame = 2
Query:  203 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYAMG 646
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD+PLVPEIAHMY +DK KYESTAR+WTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDKNKYESTARTWTQKYAMG 148          
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC4_SOLLC (Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum lycopersicum PE=2 SV=1)

HSP 1 Score: 301.597 bits (771), Expect = 3.876e-81
Identity = 141/148 (95.27%), Postives = 147/148 (99.32%), Query Frame = 2
Query:  203 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYAMG 646
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP+DSPYAGGVFLV+IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD+PLVPEIAHMY +D+AKYE+TARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPTDSPYAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYETTARSWTQKYAMG 148          
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC8_ARATH (Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis thaliana GN=UBC8 PE=1 SV=1)

HSP 1 Score: 299.286 bits (765), Expect = 1.923e-80
Identity = 139/148 (93.92%), Postives = 147/148 (99.32%), Query Frame = 2
Query:  203 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYAMG 646
            MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP++SPY+GGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD+PLVPEIAHMY +D+AKYE+TAR+WTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRAKYEATARNWTQKYAMG 148          
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC11_ARATH (Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis thaliana GN=UBC11 PE=2 SV=2)

HSP 1 Score: 293.123 bits (749), Expect = 1.378e-78
Identity = 135/148 (91.22%), Postives = 146/148 (98.65%), Query Frame = 2
Query:  203 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYAMG 646
            MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGP +SPYAGGVFLV+IHFPPDYPFKPPKV+F+TKV+HPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPD+PLVPEIAHMY +D++KYESTARSWTQKYAMG
Sbjct:    1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHMYKTDRSKYESTARSWTQKYAMG 148          
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC30_ARATH (Ubiquitin carrier protein E2 30 OS=Arabidopsis thaliana GN=UBC30 PE=2 SV=1)

HSP 1 Score: 282.337 bits (721), Expect = 2.433e-75
Identity = 129/148 (87.16%), Postives = 141/148 (95.27%), Query Frame = 2
Query:  203 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYAMG 646
            MASKRI KEL+DLQ+DPP SCSAGP  +DMF WQATIMGP+DSP+AGGVFLVTIHFPPDYPFKPPKVAFRTKV+HPNINSNGSICLDILKEQWSPALT+SKVLLSICSLLTDPNPD+PLVPEIAH+Y +D+ KYESTA+SWTQKYAMG
Sbjct:    1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPFKPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPEIAHIYKTDRVKYESTAQSWTQKYAMG 148          
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC29_ARATH (Ubiquitin carrier protein E2 29 OS=Arabidopsis thaliana GN=UBC29 PE=2 SV=1)

HSP 1 Score: 276.944 bits (707), Expect = 1.022e-73
Identity = 125/147 (85.03%), Postives = 139/147 (94.56%), Query Frame = 2
Query:  203 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYAM 643
            MA++RILKELK+LQ+DPP SCSAGP  EDMFHWQATIMGP++SPY+GGVFLV IHFPPDYPFKPPKV FRTKVFHPNINSNG+ICLDILK+QWSPALTISKVLLSICSLLTDPNPD+PLVPEIAH+Y +DK KYE+ ARSWTQKYA+
Sbjct:    1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPFKPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPEIAHIYKTDKTKYEAMARSWTQKYAL 147          
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC1_COLGL (Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletotrichum gloeosporioides GN=UBC1 PE=2 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.689e-68
Identity = 116/147 (78.91%), Postives = 134/147 (91.16%), Query Frame = 2
Query:  203 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYAM 643
            MA KRI KEL DL +DPP+SCSAGPV ED+FHWQATIMGP DSPY+GGVF + IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICS+LTDPNPDEPLVPEIAH+Y +D+A+YE+TAR WT+KYA+
Sbjct:    1 MAFKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPGDSPYSGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDEPLVPEIAHVYKTDRARYEATAREWTRKYAI 147          
BLAST of FC870253 vs. ExPASy Swiss-Prot
Match: UBC1_MAGGR (Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnaporthe grisea GN=UBC1 PE=3 SV=2)

HSP 1 Score: 258.84 bits (660), Expect = 2.881e-68
Identity = 117/147 (79.59%), Postives = 134/147 (91.16%), Query Frame = 2
Query:  203 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYAGGVFLVTIHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDEPLVPEIAHMYMSDKAKYESTARSWTQKYAM 643
            MA KRI KEL DL +DPP+SCSAGPV ED+FHWQATIMGPSDSPYAGGVF + IHFP DYPFKPPKV F T+++HPNINSNGSICLDIL++QWSPALTISKVLLSICS+LTDPNPD+PLVPEIAH+Y + +A+YESTAR WT+KYA+
Sbjct:    1 MALKRINKELTDLGRDPPSSCSAGPVGEDLFHWQATIMGPSDSPYAGGVFFLAIHFPTDYPFKPPKVNFTTRIYHPNINSNGSICLDILRDQWSPALTISKVLLSICSMLTDPNPDDPLVPEIAHVYKTARAQYESTAREWTRKYAI 147          
The following BLAST results are available for this feature:
BLAST of FC870253 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 267
Match NameE-valueIdentityDescription
UBC28_ARATH7.809e-8295.95Ubiquitin carrier protein E2 28 OS=Arabidopsis tha... [more]
UBC10_ARATH1.740e-8196.62Ubiquitin-conjugating enzyme E2 10 OS=Arabidopsis ... [more]
UBC9_ARATH2.968e-8195.95SUMO-conjugating enzyme UBC9 OS=Arabidopsis thalia... [more]
UBC4_SOLLC3.876e-8195.27Ubiquitin-conjugating enzyme E2-17 kDa OS=Solanum ... [more]
UBC8_ARATH1.923e-8093.92Ubiquitin-conjugating enzyme E2 8 OS=Arabidopsis t... [more]
UBC11_ARATH1.378e-7891.22Ubiquitin-conjugating enzyme E2 11 OS=Arabidopsis ... [more]
UBC30_ARATH2.433e-7587.16Ubiquitin carrier protein E2 30 OS=Arabidopsis tha... [more]
UBC29_ARATH1.022e-7385.03Ubiquitin carrier protein E2 29 OS=Arabidopsis tha... [more]
UBC1_COLGL1.689e-6878.91Ubiquitin-conjugating enzyme E2-16 kDa OS=Colletot... [more]
UBC1_MAGGR2.881e-6879.59Ubiquitin-conjugating enzyme E2-16 kDa OS=Magnapor... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1CA04ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA1CA04, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870253 ID=FC870253; Name=FC870253; organism=Citrus clementina; type=EST; length=880bp
GGGGCTCGACGATATTTGTGTTGAAGGACAACAAAGCAAGGGGTTGATAG
AGGAGCGAGGCGGGGGCGGCTTGACGACCTAGATCTGCTTCACCGTTTCG
CTTTCTCGACGCTATCGCTCTCCGATCCTGTTCTCTGCCGCGCAAGTTTC
GCAGGTCTTAAGGTTCGTTGTAGTTTCAATTTTAATAATCCCTTGAAGAG
TCATGGCTTCAAAGCGTATTTTGAAGGAACTCAAGGATTTGCAGAAGGAT
CCTCCCACGTCTTGTAGCGCTGGCCCTGTGGCTGAAGACATGTTCCACTG
GCAAGCAACAATTATGGGCCCTTCTGATAGCCCATATGCAGGAGGTGTAT
TTTTAGTTACCATTCATTTTCCTCCTGATTATCCTTTCAAGCCCCCAAAG
GTTGCTTTTAGGACCAAGGTCTTCCACCCGAACATCAACAGCAATGGAAG
CATCTGTCTTGATATCCTTAAAGAACAGTGGAGTCCAGCGCTTACCATTT
CAAAGGTCCTGCTCTCTATCTGCTCCTTGCTTACTGATCCAAATCCCGAC
GAGCCTCTTGTACCGGAGATTGCCCACATGTACATGTCCGACAAGGCCAA
ATATGAATCCACGGCCAGGAGCTGGACACAGAAGTATGCCATGGGATGAA
GGTTGTTAGGATATTGCAGAAAAAGGAGCATTTATTGAAATATGTTGTGT
GTGTTGTCTATCTATTTTCTTTAACTTGCTTTGGGGAGGGCAGACGTTGG
TGTTTTAGAATGGTGTTGGGAGGAGTTGCAAGGGCGGGACGTTTTTATGT
TAATGTTGAATGTTTGTGTTTGAAGCTTCTTCGATGGAACGTAGTTAATG
GTCTAAAAAAAAAAAAAAAAAAAAAAAAAA
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