FC870263

Overview
NameFC870263
Unique NameFC870263
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length808
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870263 vs. ExPASy Swiss-Prot
Match: AX10A_SOYBN (Auxin-induced protein X10A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 5.155e-13
Identity = 37/73 (50.68%), Postives = 49/73 (67.12%), Query Frame = 1
Query:  424 KPAEVPKGHLAVYVGESDDEARRVFVPVIYFNHPLFGELLKQAERVYGFNHP-GGITIPCRISEFEKVKTRID 639
            K  EVPKG+L VYVG   D+ RR  +PV Y N P F +LL QAE  +G++HP GG+TIPC+  EF  V + ++
Sbjct:   21 KSVEVPKGYLVVYVG---DKMRRFLIPVSYLNQPSFQDLLNQAEEEFGYDHPMGGLTIPCKEDEFLTVTSHLN 90          
BLAST of FC870263 vs. ExPASy Swiss-Prot
Match: A10A5_SOYBN (Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.500e-12
Identity = 37/73 (50.68%), Postives = 48/73 (65.75%), Query Frame = 1
Query:  424 KPAEVPKGHLAVYVGESDDEARRVFVPVIYFNHPLFGELLKQAERVYGFNHP-GGITIPCRISEFEKVKTRID 639
            K  +VPKG+ AVYVG   D+ RR  +PV Y N P F ELL QAE  +G++HP GG+TIPC+  EF  V   ++
Sbjct:   22 KRVDVPKGYAAVYVG---DKMRRFTIPVSYLNEPSFQELLSQAEEEFGYDHPMGGLTIPCKEEEFLNVTAHLN 91          
BLAST of FC870263 vs. ExPASy Swiss-Prot
Match: AX15A_SOYBN (Auxin-induced protein 15A OS=Glycine max PE=2 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.829e-11
Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 1
Query:  424 KPAEVPKGHLAVYVGESDDEARRVFVPVIYFNHPLFGELLKQAERVYGFNHP-GGITIPCRISEFE 618
            K A+ PKG+LAVYVGE   + +R  +PV Y N P F +LL QAE  +G++HP GG+TIPC    F+
Sbjct:   13 KAADAPKGYLAVYVGE---KLKRFVIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDVFQ 75          
BLAST of FC870263 vs. ExPASy Swiss-Prot
Match: ARG7_PHAAU (Indole-3-acetic acid-induced protein ARG7 OS=Phaseolus aureus GN=ARG7 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 3.694e-11
Identity = 34/74 (45.95%), Postives = 49/74 (66.22%), Query Frame = 1
Query:  424 KPAEVPKGHLAVYVGESDDEARRVFVPVIYFNHPLFGELLKQAERVYGFNHP-GGITIPCRISEFEKVKTRIDA 642
            K  + PKG+LAVYVGE+    +R  +PV + N PLF +LL QAE  +G++HP GG+TIPC    F+ + + + A
Sbjct:   21 KVLDAPKGYLAVYVGEN---MKRFVIPVSHLNQPLFQDLLSQAEEEFGYDHPMGGLTIPCSEDLFQHITSCLSA 91          
BLAST of FC870263 vs. ExPASy Swiss-Prot
Match: AXX15_SOYBN (Auxin-induced protein X15 OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 32/65 (49.23%), Postives = 45/65 (69.23%), Query Frame = 1
Query:  433 EVPKGHLAVYVGESDDEARRVFVPVIYFNHPLFGELLKQAERVYGFNHP-GGITIPCRISEFEKV 624
            + PKG+LAVYVGE   + +R  +PV Y N P F +LL QAE  +G++HP GG+TIPC    F+++
Sbjct:   16 DAPKGYLAVYVGE---KMKRFVIPVSYMNQPSFQDLLTQAEEEFGYDHPMGGLTIPCSEEVFQRI 77          
BLAST of FC870263 vs. ExPASy Swiss-Prot
Match: AX6B_SOYBN (Auxin-induced protein 6B OS=Glycine max PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 8.230e-11
Identity = 34/68 (50.00%), Postives = 45/68 (66.18%), Query Frame = 1
Query:  424 KPAEVPKGHLAVYVGESDDEARRVFVPVIYFNHPLFGELLKQAERVYGFNHP-GGITIPCRISEFEKV 624
            K  +V KG+LAVYVGE   + RR  +PV Y N P F +LL QAE  +G++HP GG+TIPC    F+ +
Sbjct:   21 KAVDVEKGYLAVYVGE---KMRRFVIPVSYLNKPSFQDLLSQAEEEFGYHHPNGGLTIPCSEDVFQHI 85          
The following BLAST results are available for this feature:
BLAST of FC870263 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 6
Match NameE-valueIdentityDescription
AX10A_SOYBN5.155e-1350.68Auxin-induced protein X10A OS=Glycine max PE=2 SV=... [more]
A10A5_SOYBN1.500e-1250.68Auxin-induced protein 10A5 OS=Glycine max PE=2 SV=... [more]
AX15A_SOYBN2.829e-1151.52Auxin-induced protein 15A OS=Glycine max PE=2 SV=1[more]
ARG7_PHAAU3.694e-1145.95Indole-3-acetic acid-induced protein ARG7 OS=Phase... [more]
AXX15_SOYBN8.230e-1149.23Auxin-induced protein X15 OS=Glycine max PE=2 SV=1[more]
AX6B_SOYBN8.230e-1150.00Auxin-induced protein 6B OS=Glycine max PE=2 SV=1[more]
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Properties
Property NameValue
Genbank descriptionKN0AAA1CB05ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA1CB05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870263 ID=FC870263; Name=FC870263; organism=Citrus clementina; type=EST; length=808bp
CGGGCCGGGGGACTCATCAAACATGATAAACAAAAAGAACCCAAGTCTCA
TTCTCGAGTCGTAGCAACCATCACCTATTTCCTCCATCGAACACTAGTTC
TATACGTAAAAACGCTCCACTTAATTTTGTAGCAGTCTTTTTGCTTTAGT
TCTCTTATTAAATAATATTATACAGTTACAAGAATGAATCGGTTTAGAGG
CTTCAAGCTAGGGCGCAGGATAGTGAAGGTGTTCAAGTGGATAATCCGAC
CCAGAAGAAGACCGCGTTGCAGGTATTTCCTTGGAGGCGCTGTCTCCCAG
AGTACTAGAAGCAGCTGCAAGGCCATGTCAAAGTTTTTATCCATGGCAAG
CTGCATACGGCGTGGAGCTAAAAAGCTTTGTTTTCCGAGTTCTAATCCGG
GTTTTATCCAGTTGGGTCAAGAAAAACCCGCGGAGGTACCCAAGGGACAC
TTGGCTGTGTACGTGGGGGAGTCGGATGACGAAGCCAGGAGGGTGTTTGT
GCCTGTTATTTACTTTAATCACCCCTTGTTTGGAGAGTTGCTGAAGCAAG
CGGAGCGGGTATACGGCTTCAACCATCCGGGTGGGATCACGATACCTTGT
CGGATTTCGGAGTTTGAGAAAGTGAAGACGAGAATCGACGCATGGGATCA
TTGCCGGAGTCGCAAGCACCACCGTCCACATTTGTGATATGATAGTAAAA
ATGCAGAATTTTAGATGATATTATTGATATTCCTCCAATTTTTGTAAATA
AAAATGCTGAATATATAATTTTCTTCTCTAAAAAAAAAAAAAAAAAAAAA
AAAAAAAA
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