FC870273

Overview
NameFC870273
Unique NameFC870273
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length600
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC870273 vs. ExPASy Swiss-Prot
Match: TL15A_ARATH (Thylakoid lumenal 15 kDa protein 1, chloroplastic OS=Arabidopsis thaliana GN=At2g44920 PE=1 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 4.305e-28
Identity = 60/68 (88.24%), Postives = 62/68 (91.18%), Query Frame = 2 
Query:   53 NVTKANLSNANLEGALATGITSFRGSNITGADFTDVPLRDDQRGYLCKVADGVNPTTGNATRDTLLCN 256
            NVTK NL+NANLEGA  TG TSF+GSNITGADFTDVPLRDDQR YLCKVADGVN TTGNATRDTLLCN
Sbjct:  157 NVTKVNLTNANLEGATVTGNTSFKGSNITGADFTDVPLRDDQRVYLCKVADGVNATTGNATRDTLLCN 224
The following BLAST results are available for this feature:
BLAST of FC870273 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
TL15A_ARATH4.305e-2888.24Thylakoid lumenal 15 kDa protein 1, chloroplastic ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA1CC05ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA1CC05, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870273 ID=FC870273; Name=FC870273; organism=Citrus clementina; type=EST; length=600bp
GGGGGCTGATCTTTCAGATGCTGATCTCAGAAGTGCAGACTTCTCATTGG
CAAATGTGACAAAGGCAAACTTGAGTAATGCTAACTTGGAAGGTGCTCTT
GCTACTGGCATCACCTCTTTCAGGGGATCGAATATAACCGGAGCTGACTT
CACCGACGTGCCTTTGAGAGATGATCAACGGGGATATCTGTGCAAAGTTG
CAGATGGGGTAAATCCGACAACCGGAAATGCAACCCGGGACACATTGCTC
TGCAACTAGAATTTGATTTCCTTGGTACTTCCCCATCTGGCAAAGAGGAG
AGCAACGTCCTTACTTTTGCTACATCAACAGCATCAATTTTCATTTGAGT
TGAGTGACACAGTTCTTGTGCTGCATCTAATGTAAAACATGAATTTACCC
ATAAATAGTGGCATTGAGTCATTACTCAATTTCTACACAATTTAAAGAAG
CTTATTTGTAATTTGCATGATGTAGTAAGCGGTAAACATGTATAACATAA
GAAAAATAATTCTCAATTTCCTAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAATTAAAAAAAAAAAAAAAAAAAAAAAAAAA
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