FC870280
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870280 vs. ExPASy Swiss-Prot
Match: FB84_ARATH (F-box protein At1g70590 OS=Arabidopsis thaliana GN=At1g70590 PE=2 SV=1) HSP 1 Score: 316.62 bits (810), Expect = 1.030e-85 Identity = 165/271 (60.89%), Postives = 200/271 (73.80%), Query Frame = 2 Query: 17 VK*RTGPDRSTGSRFTALQFPITEKDNRRPELTXXXXXXXXXXXXXFSCSRSIKS----TEGHDFASLPFDVLNKIAASFTLPQLRAASLVCKSWNDALRPLREAMVLLRWGKRFKHGRG-VRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKWM 814 +K RT P RS GSRF++L F ++R ++ S S S S E DF+ LP+D+L KIAA F+ P L+AASLVCKSW DAL+PLRE+M+L+RWGK++KHGRG VR NLDKALDSFLKGA RGSTLAMVDAGL+YWE +KE A++LYR+A+ LGD GQ NLGI+YLQ QP+N +EA+K L Q++ G+VRAQYQLALCLH GR V NL EA +WYL+AAEGGYVRAMYN SLCYS GEGLP + + ARKWM Sbjct: 1 MKQRTWPCRSEGSRFSSLSFLKPHDKDKRSRISSINKATAKSTTSSRSSSSSSSSRPPSNEFGDFSMLPYDILMKIAAPFSHPNLQAASLVCKSWRDALKPLRESMLLIRWGKKYKHGRGGVRANLDKALDSFLKGAMRGSTLAMVDAGLVYWERGEKEKAVNLYRRASELGDAVGQCNLGIAYLQVQPSNPKEAMKWLKQSAENGYVRAQYQLALCLHHGRVVQTNLLEATKWYLKAAEGGYVRAMYNISLCYSVGEGLPQNRKLARKWM 271
BLAST of FC870280 vs. ExPASy Swiss-Prot
Match: SE1L1_RAT (Protein sel-1 homolog 1 OS=Rattus norvegicus GN=Sel1l PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14 Identity = 49/149 (32.89%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 356 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 781 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
BLAST of FC870280 vs. ExPASy Swiss-Prot
Match: SE1L1_MOUSE (Protein sel-1 homolog 1 OS=Mus musculus GN=Sel1l PE=2 SV=2) HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14 Identity = 49/149 (32.89%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 356 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 781 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ Sbjct: 383 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 531
BLAST of FC870280 vs. ExPASy Swiss-Prot
Match: SE1L1_MESAU (Protein sel-1 homolog 1 OS=Mesocricetus auratus GN=Sel1l PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14 Identity = 49/149 (32.89%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 356 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 781 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGIQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
BLAST of FC870280 vs. ExPASy Swiss-Prot
Match: SE1L1_HUMAN (Protein sel-1 homolog 1 OS=Homo sapiens GN=SEL1L PE=1 SV=3) HSP 1 Score: 80.4925 bits (197), Expect = 1.243e-14 Identity = 49/149 (32.89%), Postives = 81/149 (54.36%), Query Frame = 2 Query: 356 GRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWE-----MDKKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGL 781 GRGV +N +A D F A G++ AM G MY E E A+ +++AA +G+P GQ LG++YL + N + A+K +A+ G V Q QL + G GV + ++A +++ A++GG++ A YN + ++ G G+ Sbjct: 387 GRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQSNETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGV 535
BLAST of FC870280 vs. ExPASy Swiss-Prot
Match: YBEQ_ECOLI (Uncharacterized protein ybeQ OS=Escherichia coli (strain K12) GN=ybeQ PE=4 SV=2) HSP 1 Score: 70.4774 bits (171), Expect = 1.286e-11 Identity = 51/165 (30.91%), Postives = 79/165 (47.88%), Query Frame = 2 Query: 338 GKRFKHGRGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMDKKEA-----AISLYRQAAVLGDPAGQFNLGISYLQAQPANAEEAVKLLY--QASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQARKW 811 G+++ + K+ ++A+ K A +G T A G W +D+ EA A+ Y+ AA G Q NLG Y + A+ + QA++ GH AQ LA G+GV N AA WYL++A+ G A + + Y+ GEG+ ++QA W Sbjct: 69 GQKYTEDKSRHKDNEQAIFWLKKAALQGHTFASNALG---WTLDRGEAPNYKEAVVWYQIAAESGMSYAQNNLGWMYRNGNGVAKDYALAFFWYKQAALQGHSDAQNNLADLYEDGKGVAQNKTLAAFWYLKSAQQGNRHAQFQIAWDYNAGEGVDQDYKQAMYW 230
BLAST of FC870280 vs. ExPASy Swiss-Prot
Match: SE1L2_MOUSE (Protein sel-1 homolog 2 OS=Mus musculus GN=Sel1l2 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 8.337e-11 Identity = 49/155 (31.61%), Postives = 75/155 (48.39%), Query Frame = 2 Query: 359 RGVRKNLDKALDSFLKGAARGSTLAMVDAGLMYWEMD-----KKEAAISLYRQAAVLGDPAGQFNLGISYLQAQ--PANAEEAVKLLYQASIAGHVRAQYQLALCLHRGRGVDFNLQEAARWYLRAAEGGYVRAMYNTSLCYSFGEGLPLSHRQA 802 +G+ ++ KAL FLK A GS AM G MY+E + A + AA G+ G LG+ Y + P N EA+K +A+ G AQ+QL + G GV + + A +++ A++ G A+Y + Y+ G G+ S R A Sbjct: 312 KGLDQDYSKALYYFLKAAKAGSANAMAFIGKMYFEGNAAAPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPVNYGEALKYFQKAAEKGWPNAQFQLGFMYYSGSGVWKDYKLAFKYFYLASQSGQPLAIYYLAEMYATGTGVLRSCRTA 466 The following BLAST results are available for this feature:
BLAST of FC870280 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 7
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC870280 ID=FC870280; Name=FC870280; organism=Citrus clementina; type=EST; length=816bpback to top |