FC870359

Overview
NameFC870359
Unique NameFC870359
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length478
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870359 vs. ExPASy Swiss-Prot
Match: C81F1_ARATH (Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CYP81F1 PE=2 SV=2)

HSP 1 Score: 82.0333 bits (201), Expect = 1.472e-15
Identity = 40/71 (56.34%), Postives = 49/71 (69.01%), Query Frame = 1
Query:   19 IPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI-GPEVDMTASYGLSLSKTVPLVAMCSPRQDMIGML 228
            +PFG GRR CPGA +  R ++ ALGSLIQCFEWE + G E+DM+ S GL + K  PL AMC PR  M  +L
Sbjct:  429 MPFGNGRRTCPGAGLGQRIVTLALGSLIQCFEWENVKGEEMDMSESTGLGMRKMDPLRAMCRPRPIMSKLL 499          
BLAST of FC870359 vs. ExPASy Swiss-Prot
Match: C81D1_ARATH (Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CYP81D1 PE=2 SV=1)

HSP 1 Score: 77.0258 bits (188), Expect = 4.735e-14
Identity = 35/64 (54.69%), Postives = 46/64 (71.88%), Query Frame = 1
Query:   19 IPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKIG-PEVDMTASYGLSLSKTVPLVAMCSPR 207
            + FG+GRRACPG+ +A R +  ALGSLIQCFEWE++G  EVDM    G ++ K +PL A+C  R
Sbjct:  431 LAFGLGRRACPGSGLAQRIVGLALGSLIQCFEWERVGNVEVDMKEGVGNTVPKAIPLKAICKAR 494          
BLAST of FC870359 vs. ExPASy Swiss-Prot
Match: C81E1_GLYEC (Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata GN=CYP81E1 PE=1 SV=2)

HSP 1 Score: 74.3294 bits (181), Expect = 3.069e-13
Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 1
Query:   19 IPFGMGRRACPGAAMAIRTISFALGSLIQCFEWEKI-GPEVDMTASYGLSLSKTVPLVAMCSPR 207
            I FGMGRRACPG  +AIR IS  L  LIQCF+W+ I G ++D+    G +L+K VPL AMC  R
Sbjct:  427 IAFGMGRRACPGEGLAIRAISMTLALLIQCFDWKLINGDKIDLAERDGFTLTKLVPLKAMCKSR 490          
The following BLAST results are available for this feature:
BLAST of FC870359 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
C81F1_ARATH1.472e-1556.34Cytochrome P450 81F1 OS=Arabidopsis thaliana GN=CY... [more]
C81D1_ARATH4.735e-1454.69Cytochrome P450 81D1 OS=Arabidopsis thaliana GN=CY... [more]
C81E1_GLYEC3.069e-1356.25Isoflavone 2'-hydroxylase OS=Glycyrrhiza echinata ... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA1CH09ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA1CH09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870359 ID=FC870359; Name=FC870359; organism=Citrus clementina; type=EST; length=478bp
GGGAGAGGGATTCAACATATTCCATTTGGCATGGGGAGGAGAGCTTGCCC
AGGTGCAGCCATGGCTATCCGTACAATTTCTTTTGCTTTGGGTTCGCTCA
TACAGTGCTTCGAGTGGGAAAAGATAGGGCCGGAGGTGGACATGACTGCA
AGTTATGGACTATCTCTATCTAAGACCGTGCCTTTGGTGGCTATGTGCAG
TCCGCGGCAAGATATGATTGGAATGCTGAACAGATCCAGTTAGGGTAAAC
TTGCCGCTGGAAATTCTCGGGGTTTGCAGGGGACCTTGCAGGTGACTTTC
AATAAAGGTTGTAAAATTTACTGGAATTTGTAGAGCAGTACTCTAGAGAC
TGTAGATCACTTCATGCCATGGCATTGCGTGACCAAATTTTAGATTTGAT
AATCCTGTTTTGTGGTTTTGCGGTAGTTTCTTAATATCGGTTTGATTCCA
AAAAAAAAAAAAAAAAAAAAAAAAAAAA
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