FC870378

Overview
NameFC870378
Unique NameFC870378
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length596
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC870378 vs. ExPASy Swiss-Prot
Match: 12KD_FRAAN (Auxin-repressed 12.5 kDa protein OS=Fragaria ananassa PE=2 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 1.736e-13
Identity = 33/44 (75.00%), Postives = 39/44 (88.64%), Query Frame = 1 
Query:   31 SVFHPGSNLATRGIGAEVFDKPTHPNSPTVYDWLYSGETRSKHH 162
            SVFHPGSNL+++ +G +VFD P  PNSPTVYDW+YSGETRSKHH
Sbjct:   68 SVFHPGSNLSSKTMGNQVFDSP-QPNSPTVYDWMYSGETRSKHH 110
The following BLAST results are available for this feature:
BLAST of FC870378 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
12KD_FRAAN1.736e-1375.00Auxin-repressed 12.5 kDa protein OS=Fragaria anana... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA3BF07ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA3BF07, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870378 ID=FC870378; Name=FC870378; organism=Citrus clementina; type=EST; length=596bp
CGCGCCGGGGTAAGGACAACGTGTGGGATGAGCGTGTTTCACCCCGGTAG
CAACCTTGCTACTAGGGGTATCGGTGCAGAGGTCTTTGACAAGCCCACAC
ATCCTAACTCTCCCACTGTTTATGACTGGCTTTACAGTGGGGAGACTAGG
AGCAAGCATCATCACTGAGTGGATGATACGCTCCAGCGATGTAAATGAAT
GTGATGGGTCACCAACTCACCGGATGAGTTGCCTGCAGTCTGTAGATAGT
GTCGTTTCGTTTTGGATTTCGCAACGTGTCCTTGTCGTTTTTGTTAATGC
TATTTGTATTACGTGTCCTTCCTATCTAAAGTTTGGTTTTAAATGCTGCT
GACTAAAAAGTAAACCAAAGACTGTGTGATGTTTTATATCATATAATTGT
ATGTGACGTGAGGATTGCCTAAGCTTGTGGGCGGAGATGAAAGGTTACTG
GTTTTTGGGTTTAGGACATGTTTTTGATTGTCATTTTGTAAGAGCCAAGA
TCATCCCTTCGTGGACGGTCGTGATGAGCATATATGTTTTATTATTAATA
AATAAGTTGCTTCTCTGAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
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