FC870391

Overview
NameFC870391
Unique NameFC870391
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length660
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870391 vs. ExPASy Swiss-Prot
Match: A115_TOBAC (Auxin-induced protein PCNT115 OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 244.202 bits (622), Expect = 4.454e-64
Identity = 121/141 (85.82%), Postives = 126/141 (89.36%), Query Frame = 2
Query:   35 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGI-----SYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTV 442
            V RIKLGSQGLEVSAQGLGCMGMSAFYGPPKPE DMI LIHHAINSGITLLDTSD+YGPHTNEILLGKALKGG RERV LATKFGI       A+GKR + GDPAY RAACEASLKRLDIDCIDLYYQHR+DTRVPIE+TV
Sbjct:    8 VPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPEPDMIQLIHHAINSGITLLDTSDVYGPHTNEILLGKALKGGTRERVVLATKFGIVLGDEKKAEGKRAVHGDPAYVRAACEASLKRLDIDCIDLYYQHRVDTRVPIEITV 148          
BLAST of FC870391 vs. ExPASy Swiss-Prot
Match: IN22_MAIZE (IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1)

HSP 1 Score: 243.817 bits (621), Expect = 5.816e-64
Identity = 112/137 (81.75%), Postives = 127/137 (92.70%), Query Frame = 2
Query:   32 AVKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTV 442
            +V RIKLGSQGLEVSAQGLGCMGMSAFYGPPKPES+MI LIHHA+++G+T LDTSD+YGPHTNE+LLGKAL+GG+RE+VELATKFG+S+ADGKREI GDPAY R ACE S KRL +DCIDLYYQHRID RVPIEVT+
Sbjct:    7 SVPRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESEMIKLIHHAVDAGVTFLDTSDVYGPHTNEVLLGKALQGGVREKVELATKFGVSFADGKREIHGDPAYVRTACEGSFKRLGVDCIDLYYQHRIDKRVPIEVTI 143          
BLAST of FC870391 vs. ExPASy Swiss-Prot
Match: YAKC_SCHPO (Aldo-keto reductase yakc [NADP+] OS=Schizosaccharomyces pombe GN=yakc PE=1 SV=1)

HSP 1 Score: 99.3673 bits (246), Expect = 1.772e-20
Identity = 56/124 (45.16%), Postives = 72/124 (58.06%), Query Frame = 2
Query:   71 VSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISY--ADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIE 433
            V A G GCMG+ A YGP   E++  A++ HA + G T  D+SD+YG   NE  +G+  K  G R+ + LATKFG       G+  +  +P Y   A + SLKRL IDCIDLYY HR     PIE
Sbjct:   13 VPAIGFGCMGLHAMYGPSSEEANQ-AVLTHAADLGCTFWDSSDMYGFGANEECIGRWFKQTGRRKEIFLATKFGYEKNPETGELSLNNEPDYIEKALDLSLKRLGIDCIDLYYVHRFSGETPIE 135          
BLAST of FC870391 vs. ExPASy Swiss-Prot
Match: YQKF_BACSU (Uncharacterized oxidoreductase yqkF OS=Bacillus subtilis GN=yqkF PE=3 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.041e-12
Identity = 46/126 (36.51%), Postives = 69/126 (54.76%), Query Frame = 2
Query:   35 VKRIKLGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDP--AYARAACEASLKRLDIDCIDLYYQH 406
            +++ KLG+  L++S  GLGCM +         ++  ++++  AI  GI  LDT+D+Y    NE ++G A++   R  + LATK G  + DG      DP  AY + A + SL RL  D IDLY  H
Sbjct:    1 MRKRKLGTSDLDISEVGLGCMSLGT------EKNKALSILDEAIELGINYLDTADLYDRGRNEEIVGDAIQ-NRRHDIILATKAGNRWDDGSEGWYWDPSKAYIKEAVKKSLTRLKTDYIDLYQLH 119          
BLAST of FC870391 vs. ExPASy Swiss-Prot
Match: GS69_BACSU (General stress protein 69 OS=Bacillus subtilis GN=yhdN PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.360e-12
Identity = 49/131 (37.40%), Postives = 67/131 (51.15%), Query Frame = 2
Query:   50 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKG-GMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVT 439
            +   G+E S  GLG   +         E   I  I  A++ GITL+DT+  YG   +E ++GKA+K  G R++V LATK  + + + +     + A      E SLKRL  D IDLY  H  D  VPIE T
Sbjct:    6 IADTGIEASRIGLGTWAIGGTMWGGTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYGKRDQVILATKTALDWKNNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEET 136          
BLAST of FC870391 vs. ExPASy Swiss-Prot
Match: IOLS_BACSU (Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.748e-12
Identity = 49/138 (35.51%), Postives = 70/138 (50.72%), Query Frame = 2
Query:   35 VKRIKLGSQGLEVSAQGLG--CMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTNEILLGKALKGGMRERVELATKFGISYADGKREIRGDPAYARAACEASLKRLDIDCIDLYYQHRIDTRVPIEVTV 442
            +K+ KLG   L+V   GLG   +G    Y P   E     L+  AI +G+T+LDT+ IYG   +E L+G+ L+   RE V +ATK               P + + + + SLKRL+ D IDL+Y H  D   P +  V
Sbjct:    1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLY-PNLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDVVIATKAAHRKQGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAV 137          
BLAST of FC870391 vs. ExPASy Swiss-Prot
Match: YRPG_BACSU (Uncharacterized oxidoreductase yrpG OS=Bacillus subtilis GN=yrpG PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 5.713e-11
Identity = 53/136 (38.97%), Postives = 68/136 (50.00%), Query Frame = 2
Query:   50 LGSQGLEVSAQGLGCMGMSAFYGPPKPESDMIALIHHAINSGITLLDTSDIYGPHTN----EILLGK--ALKGGMRERVELATKFGISYAD---GKREIRGDPAYA-RAACEASLKRLDIDCIDLYYQHRIDTRVP 427
            LG  GL VS   LG M     +G    E     ++  A+++GI   DT++IYG   N    E ++GK  A  G  RE+V LATK     +D   G  ++RG   Y  R   E SLKRL  D I+LY  H ID R P
Sbjct:    6 LGRTGLRVSRLCLGTMN----FGVDTDEKTAFRIMDEALDNGIQFFDTANIYGWGKNAGLTESIIGKWFAQGGQRREKVVLATKVYEPISDPNDGPNDMRGLSLYKIRRHLEGSLKRLQTDHIELYQMHHIDRRTP 137          
The following BLAST results are available for this feature:
BLAST of FC870391 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 7
Match NameE-valueIdentityDescription
A115_TOBAC4.454e-6485.82Auxin-induced protein PCNT115 OS=Nicotiana tabacum... [more]
IN22_MAIZE5.816e-6481.75IN2-2 protein OS=Zea mays GN=IN2-2 PE=2 SV=1[more]
YAKC_SCHPO1.772e-2045.16Aldo-keto reductase yakc [NADP+] OS=Schizosaccharo... [more]
YQKF_BACSU1.041e-1236.51Uncharacterized oxidoreductase yqkF OS=Bacillus su... [more]
GS69_BACSU1.360e-1237.40General stress protein 69 OS=Bacillus subtilis GN=... [more]
IOLS_BACSU6.748e-1235.51Protein iolS OS=Bacillus subtilis GN=iolS PE=1 SV=... [more]
YRPG_BACSU5.713e-1138.97Uncharacterized oxidoreductase yrpG OS=Bacillus su... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA3BG09ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA3BG09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870391 ID=FC870391; Name=FC870391; organism=Citrus clementina; type=EST; length=660bp
GGGGATCAAAAAAAAAAAAAAAATGGCGGGGGCAGTGAAGAGAATCAAGC
TTGGTTCACAAGGTCTAGAGGTTTCAGCACAAGGCTTAGGATGCATGGGC
ATGTCCGCCTTCTACGGGCCCCCGAAGCCAGAATCCGACATGATCGCCTT
GATCCACCATGCCATTAACAGTGGCATCACTCTACTTGACACCTCCGATA
TTTACGGGCCCCACACCAATGAAATCCTTCTGGGAAAGGCTTTGAAGGGA
GGAATGAGGGAAAGAGTTGAATTGGCTACTAAATTTGGTATCAGCTATGC
GGATGGTAAAAGGGAAATTCGCGGTGACCCGGCTTATGCGAGAGCTGCAT
GTGAGGCCAGCTTGAAGCGTCTGGATATTGATTGTATTGATCTTTATTAC
CAACATCGCATTGATACACGAGTTCCCATTGAAGTCACGGTTTGCCCCCC
TTTTTTGTATATGTCTCAGTCTTGATTCATTATGAGATTTTTTTTTTTCC
TTTCCCCCTCTTCCATTGCTTAATTCTTTCATTTTTTTCACTTGCTTGTC
ATTTACATTTTTTGGCAATGTGCTGAACCCTGTTATTTACATCATCTGAT
TTATTGTTTGGTAAAAGTTAGTTAGAACCCTAAAAAAAAAAAAAAAAAAA
AAAAAAAAAA
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