FC870398
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870398 vs. ExPASy Swiss-Prot
Match: CHI1_GOSHI (Endochitinase 1 OS=Gossypium hirsutum PE=3 SV=1) HSP 1 Score: 85.5001 bits (210), Expect = 2.822e-16 Identity = 34/56 (60.71%), Postives = 43/56 (76.79%), Query Frame = 3 Query: 3 LPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFG 170 +PGYG+ TNIINGG+ECG+GWN V +RIGF+ +C G+ G NLDCY+Q PFG Sbjct: 261 VPGYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFG 316
BLAST of FC870398 vs. ExPASy Swiss-Prot
Match: CHI2_ORYSJ (Chitinase 2 OS=Oryza sativa subsp. japonica GN=Cht2 PE=1 SV=1) HSP 1 Score: 85.1149 bits (209), Expect = 3.686e-16 Identity = 35/54 (64.81%), Postives = 43/54 (79.63%), Query Frame = 3 Query: 6 PGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 167 PGYG+ TNI+NGG+ECG G +D V NRIGF+ +CG FGI G NLDCY+Q+PF Sbjct: 276 PGYGVITNIVNGGLECGHGPDDRVANRIGFYQRYCGAFGIGTGGNLDCYNQRPF 329
BLAST of FC870398 vs. ExPASy Swiss-Prot
Match: CHIQ_TOBAC (Acidic endochitinase Q OS=Nicotiana tabacum PE=1 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 6.287e-16 Identity = 35/56 (62.50%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 3 LPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFG 170 +PGYG+ TNIINGGIECG G NDAV +RIG++ +CG + PG NLDCY+Q+ FG Sbjct: 196 VPGYGVITNIINGGIECGIGRNDAVEDRIGYYRRYCGMLNVAPGENLDCYNQRNFG 251
BLAST of FC870398 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 1.829e-15 Identity = 33/56 (58.93%), Postives = 44/56 (78.57%), Query Frame = 3 Query: 3 LPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFG 170 LPGYG+ TN++NGG+ECG+G N V +R+GFF +CG G+ G NLDCY+Q+PFG Sbjct: 188 LPGYGVLTNLLNGGLECGKGPNPQVADRLGFFRRYCGLLGVGTGNNLDCYNQRPFG 243
BLAST of FC870398 vs. ExPASy Swiss-Prot
Match: CHIB_POPTR (Acidic endochitinase WIN6.2B OS=Populus trichocarpa PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.389e-15 Identity = 38/61 (62.30%), Postives = 45/61 (73.77%), Query Frame = 3 Query: 3 LPGYGLTTNIINGGIECGQGW-NDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFGLILM 182 +PGYG+ TNIINGGIECGQG N+A NRIGF+ T+C G G NLDCY Q+PFG L+ Sbjct: 237 VPGYGVITNIINGGIECGQGGPNNANENRIGFYKTYCDSLGTTYGSNLDCYQQRPFGYGLL 297
BLAST of FC870398 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 82.4185 bits (202), Expect = 2.389e-15 Identity = 33/54 (61.11%), Postives = 41/54 (75.93%), Query Frame = 3 Query: 9 GYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFG 170 GYG+ TNIINGG+ECG+GWN V +RIGF+ +C G+ G NLDCY+Q PFG Sbjct: 241 GYGVITNIINGGLECGKGWNAQVEDRIGFYKRYCDILGVSYGNNLDCYNQSPFG 294
BLAST of FC870398 vs. ExPASy Swiss-Prot
Match: CHI2_PEA (Endochitinase A2 OS=Pisum sativum GN=CHI2 PE=1 SV=2) HSP 1 Score: 82.0333 bits (201), Expect = 3.120e-15 Identity = 37/64 (57.81%), Postives = 46/64 (71.88%), Query Frame = 3 Query: 3 LPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFGLILMARSM 194 LPGYG TNIINGG+ECG+G + V++RIGF+ +C FGI G NLDCY Q+PFG L S+ Sbjct: 253 LPGYGTVTNIINGGLECGRGQDSRVQDRIGFYKRYCDIFGIGYGDNLDCYSQRPFGSSLPLSSI 316
BLAST of FC870398 vs. ExPASy Swiss-Prot
Match: CHIT_PHAVU (Endochitinase OS=Phaseolus vulgaris PE=1 SV=1) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 36/67 (53.73%), Postives = 46/67 (68.66%), Query Frame = 3 Query: 3 LPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPFGLILMARSM*SS 203 LPGYG TNIINGG+ECG+G + V++RIGFF +C G+ G NLDCY Q PFG L+ + +S Sbjct: 261 LPGYGTVTNIINGGLECGRGQDSRVQDRIGFFKRYCDLLGVGYGNNLDCYSQTPFGNSLLLSDLVTS 327
BLAST of FC870398 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 80.8777 bits (198), Expect = 6.952e-15 Identity = 33/55 (60.00%), Postives = 43/55 (78.18%), Query Frame = 3 Query: 3 LPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 167 LPGYG+ TNIINGG+ECG+G + V +RIGF+ +C FG+ PG NLDCY+Q+ F Sbjct: 272 LPGYGVITNIINGGLECGRGQDGRVADRIGFYQRYCNIFGVNPGGNLDCYNQRSF 326
BLAST of FC870398 vs. ExPASy Swiss-Prot
Match: CHI1_THECC (Endochitinase 1 OS=Theobroma cacao GN=CHIA1 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 9.079e-15 Identity = 32/55 (58.18%), Postives = 42/55 (76.36%), Query Frame = 3 Query: 3 LPGYGLTTNIINGGIECGQGWNDAVRNRIGFFSTFCGKFGIQPGYNLDCYHQQPF 167 +PG+GL TNIINGG+ECGQGWN V +RIGF+ +C G+ G NLDCY+Q+ + Sbjct: 258 VPGFGLITNIINGGLECGQGWNAKVEDRIGFYKRYCDTLGVGYGNNLDCYNQRSY 312 The following BLAST results are available for this feature:
BLAST of FC870398 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 39
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870398 ID=FC870398; Name=FC870398; organism=Citrus clementina; type=EST; length=682bpback to top |