FC870401

Overview
NameFC870401
Unique NameFC870401
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length667
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC870401 vs. ExPASy Swiss-Prot
Match: MPPB_ARATH (Probable mitochondrial-processing peptidase subunit beta OS=Arabidopsis thaliana GN=At3g02090 PE=1 SV=2)

HSP 1 Score: 105.916 bits (263), Expect = 1.947e-22
Identity = 48/60 (80.00%), Postives = 56/60 (93.33%), Query Frame = 1 
Query:    4 GRRIPFVELFARIDSVDASTVKRVANRFIYDRDIAIAAMGPIQGLPDYNWFKRKTYWNRY 183
            GRRIP  ELFARID+VDASTVKRVAN++IYD+DIAI+A+GPIQ LPDYN F+R+TYWNRY
Sbjct:  472 GRRIPTAELFARIDAVDASTVKRVANKYIYDKDIAISAIGPIQDLPDYNKFRRRTYWNRY 531
The following BLAST results are available for this feature:
BLAST of FC870401 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
MPPB_ARATH1.947e-2280.00Probable mitochondrial-processing peptidase subuni... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA3BH08ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA3BH08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870401 ID=FC870401; Name=FC870401; organism=Citrus clementina; type=EST; length=667bp
GGGGGTCGAAGAATCCCATTTGTTGAATTGTTTGCTAGGATAGACTCCGT
AGATGCAAGCACTGTCAAGCGCGTTGCAAACAGATTTATTTACGACAGGG
ATATCGCAATTGCTGCAATGGGTCCAATTCAAGGTTTACCCGACTACAAC
TGGTTCAAACGCAAAACCTACTGGAATAGATACTAAGTTATCTCATGGTT
GTTCATTACTGCATCCCCGCCTTCCTGGGCGGAGATTTCAAACAATTTTT
GGGTTGCAATTTACACAATCAATGCCCTTGGGAGAGGCTTCAGGGCTATG
GTATTTTATTGAATTCTTTTCTAGCTCTTGCTTCTGTAACTTCATAATTT
GTTCAGGAAATAAGTAAGCTGTCTTCAGTGATTTGGCCCTCGGATTTTCA
TTGCTTTGAGCTGAACAGCTCAAGCAACAGCTTTGAATGATGATAAATTT
TCAGCTGCATCACATCATATTGCCTTTCGTTTTCAAGGCATTAAAGTTTC
TGGTTGGCTGCATTGGTGGCTCAACTGCCTGCCTGCGATTTGATTGATAA
ATAATAATTAAGTGTTACTGTTGAATTAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAATTTAAAAAAAAAA
AAAAAAAAAAAAAAAAA
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