FC870412
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 3.361e-36 Identity = 90/194 (46.39%), Postives = 117/194 (60.31%), Query Frame = 1 Query: 52 EESSILEFIRQFL----------LGDFTSLDDPNLSFLQPMESEFPVIKSEPDSPTFCEIIKPEP-------LDITCLGSSNWTESPQKRSEPKLADT---EERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRREKTLDLQESTIS 573 EESS L+ I++ L + DF D +S L +E PV K EP SP ++ P+ ++ SS+ T SP+ + T EE +HYRGVRRRPWGK+AAEIRDPA+KGSR+WLGTF+SD+DAA+AYD AAF++RGRKA+LNFPL+AG P + RKRRR Q +T S Sbjct: 5 EESSDLDVIQKHLFEDLMIPDGFIEDFVFDDTAFVSGLWSLEPFNPVPKLEPSSP----VLDPDSYVQEILQMEAESSSSSSTTTSPEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRRTDVPQPQGTTTS 194
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1) HSP 1 Score: 149.828 bits (377), Expect = 1.668e-35 Identity = 89/185 (48.11%), Postives = 114/185 (61.62%), Query Frame = 1 Query: 52 EESSILEFIRQFLLGDFTSLD------DPNLSFLQPMESEFP-VIKSEPDSPTFCEIIKPEPLDITCL---GSSNWTESPQKRSEPKLADTEER-------------KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRR 537 EESS LE I+ LL D D D + SF+ + P V K EPDSP ++ P+ L G S+ + SP+ S +T++ +HYRGVRRRPWGK+AAEIRDPA+KGSR+WLGTF+SDVDAA+AYD AAF++RGRKA+LNFPL+AG PA + RKR+R Sbjct: 5 EESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWCIEPHVPKQEPDSP----VLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAPANSGRKRKR 185
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 3.256e-31 Identity = 79/194 (40.72%), Postives = 110/194 (56.70%), Query Frame = 1 Query: 4 DFSSILINMSNMTTLEEESSILEFIRQFLLGDFTSLDDP-NLSFLQ-PMESEFPVIKSEPD-----------SPTFCEIIKPEPLDITCLGSSNWTESPQKRSEPKLA---DTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRR 537 D SSI+ S+ + ++F + LD P ++ FL P E + V S+ D P I+ PL I+ + W + + ++P++ EE+KHYRGVR+RPWGK+AAEIRDP ++GSRVWLGTFD+ ++AA+AYD AAFR+RG KAILNFPLE G P A K+R+ Sbjct: 43 DSSSIIFGSSSSSFAP-----IDFSESVCKPEIIDLDTPRSMEFLSIPFEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKPRADEGEKKRK 231
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 1.512e-28 Identity = 74/196 (37.76%), Postives = 104/196 (53.06%), Query Frame = 1 Query: 91 LGDFTSLDDPNLSFLQ--------------------PMESEFP-------VIKSEPDSPTFCEIIKPEPLDITCLGSSNWTESPQKRSEPKL----ADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRREKTLDLQESTISII*K 585 + DFTS D F + ++SE P +S P T KP PL I + W + +P+L EE++HYRGVR RPWGK+AAEIRDP R+G+RVWLGTF++ ++AA+AYD AFR+RG KAILNFPLE +P A++ R ++ D +E ++++ K Sbjct: 34 MNDFTSFDQTGFEFSEFETKPEIIDLVTPKPEIFDFDVKSEIPSESNDSFTFQSNPPRVTVQSNRKP-PLKIAPPNRTKWIQFATGNPKPELPVPVVAAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEVDKWNPRAEDGRGLYNKRKRDGEEEEVTVVEK 228
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1) HSP 1 Score: 122.479 bits (306), Expect = 2.852e-27 Identity = 74/176 (42.05%), Postives = 103/176 (58.52%), Query Frame = 1 Query: 49 EEESSILEFIRQFLLGDFTSL--DDPNL--SFLQPMESEFP--VIKSEPDSPTFCEIIKPEPLDITCLGSSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNS-----RKRRREK 543 ++E+ ++FI Q LL DF S+ D P+L + L SE I ++ P + PL + + T++ ++ EE +HYRGVRRRPWGKYAAEIRDP +KG R+WLGT+D+ V+A +AYD AAF++RGRKAILNFPL+ S KR+R+K Sbjct: 4 KQEALAIDFISQHLLTDFVSMETDHPSLFTNQLHNFHSETGPRTITNQSPKPNSTLNQRKPPLPNLSVSRTVSTKTEKE---------EEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLDVRVTSETCSGEGVIGLGKRKRDK 170
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1) HSP 1 Score: 121.709 bits (304), Expect = 4.865e-27 Identity = 76/180 (42.22%), Postives = 96/180 (53.33%), Query Frame = 1 Query: 31 SNMTTLEEESSILEFIRQFLLGDFTSLDDPNLSFLQPMESEFPVIKSEPDSPTFCEIIKPEPLDITCLGSSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSR------KRRREKTLD 552 S+ E++ S L+ I Q LL DF SLD + S K P I P T +P + +++HYRGVRRRPWGKYAAEIRDP +KG RVWLGTFD+ ++AA+ YD AAF++RG KAILNFPLEAG N + KR+R+ T D Sbjct: 4 SHQQQQEQDQSALDLITQHLLTDFPSLDTFASTIHHCTTSTLSQRK-----PPLATIAVP-------------TTAP-------VVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAGKHEDLGDNKKTISLKAKRKRQVTED 158
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1) HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26 Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = 1 Query: 298 ERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADS-------PPAKNSRKRRRE 540 E+KHYRGVR+RPWGK+AAEIRDP RKG+RVWLGTFD+ ++AAKAYD AAF++RG KAI+NFPLE PA + RKR RE Sbjct: 141 EKKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEVANFKQQDNEILQPANSGRKRMRE 228
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 1.198e-25 Identity = 58/105 (55.24%), Postives = 79/105 (75.24%), Query Frame = 1 Query: 280 KLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEA-------GADSPPAKNSRKRRREKTLDLQESTIS 573 +LA TE +KHYRGVR+RPWGK+AAEIRDP RKG+RVWLGTFD+ ++AAKAYD AA+++RG KAI+NFPLE + P NS ++R +T++ ++ I+ Sbjct: 129 ELAPTE-KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLEVANFKQEFNNEIRPLVNSSRKRVRETVNEEQLVIN 232
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25 Identity = 64/144 (44.44%), Postives = 83/144 (57.64%), Query Frame = 1 Query: 151 EFPVIKSEPDSPTFCEIIKPEPLDITCLGSSNWT--ESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSP-PAKNSRKRRREKTLDLQESTIS 573 +FP +K EP + N+T E K++ P + KHYRGVR+RPWGK+AAEIRDPA+ G+RVWLGTF++ DAA AYD AAFRMRG +A+LNFPL + P P + + KR + ST S Sbjct: 82 DFPAVKVEP--------------------TENFTAMEEKPKKAIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSS 205
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.325e-24 Identity = 54/94 (57.45%), Postives = 69/94 (73.40%), Query Frame = 1 Query: 256 SPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSP-PAKNSRKRR 534 SP + + A+ +HYRGVRRRPWGK+AAEIRDPA+ G+RVWLGT+++D +AA AYD AA+RMRG KA LNFP G + P P + + KRR Sbjct: 87 SPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKRR 180 The following BLAST results are available for this feature:
BLAST of FC870412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 111
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870412 ID=FC870412; Name=FC870412; organism=Citrus clementina; type=EST; length=814bpback to top |