FC870412

Overview
NameFC870412
Unique NameFC870412
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length814
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF107_ARATH (Ethylene-responsive transcription factor ERF107 OS=Arabidopsis thaliana GN=ERF107 PE=2 SV=1)

HSP 1 Score: 152.14 bits (383), Expect = 3.361e-36
Identity = 90/194 (46.39%), Postives = 117/194 (60.31%), Query Frame = 1
Query:   52 EESSILEFIRQFL----------LGDFTSLDDPNLSFLQPMESEFPVIKSEPDSPTFCEIIKPEP-------LDITCLGSSNWTESPQKRSEPKLADT---EERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRREKTLDLQESTIS 573
            EESS L+ I++ L          + DF   D   +S L  +E   PV K EP SP    ++ P+        ++     SS+ T SP+  +      T   EE +HYRGVRRRPWGK+AAEIRDPA+KGSR+WLGTF+SD+DAA+AYD AAF++RGRKA+LNFPL+AG    P  + RKRRR      Q +T S
Sbjct:    5 EESSDLDVIQKHLFEDLMIPDGFIEDFVFDDTAFVSGLWSLEPFNPVPKLEPSSP----VLDPDSYVQEILQMEAESSSSSSTTTSPEVETVSNRKKTKRFEETRHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDIDAARAYDYAAFKLRGRKAVLNFPLDAGKYDAPVNSCRKRRRTDVPQPQGTTTS 194          
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF106_ARATH (Ethylene-responsive transcription factor ERF106 OS=Arabidopsis thaliana GN=ERF106 PE=2 SV=1)

HSP 1 Score: 149.828 bits (377), Expect = 1.668e-35
Identity = 89/185 (48.11%), Postives = 114/185 (61.62%), Query Frame = 1
Query:   52 EESSILEFIRQFLLGDFTSLD------DPNLSFLQPMESEFP-VIKSEPDSPTFCEIIKPEPLDITCL---GSSNWTESPQKRSEPKLADTEER-------------KHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRR 537
            EESS LE I+  LL D    D      D + SF+  +    P V K EPDSP    ++ P+      L   G S+ + SP+  S     +T++              +HYRGVRRRPWGK+AAEIRDPA+KGSR+WLGTF+SDVDAA+AYD AAF++RGRKA+LNFPL+AG    PA + RKR+R
Sbjct:    5 EESSDLEAIQSHLLEDLLVCDGFMGDFDFDASFVSGLWCIEPHVPKQEPDSP----VLDPDSFVNEFLQVEGESSSSSSPELNSSSSTYETDQSVKKAERFEEEVDARHYRGVRRRPWGKFAAEIRDPAKKGSRIWLGTFESDVDAARAYDCAAFKLRGRKAVLNFPLDAGKYEAPANSGRKRKR 185          
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF102_ARATH (Ethylene-responsive transcription factor 5 OS=Arabidopsis thaliana GN=ERF5 PE=2 SV=1)

HSP 1 Score: 135.576 bits (340), Expect = 3.256e-31
Identity = 79/194 (40.72%), Postives = 110/194 (56.70%), Query Frame = 1
Query:    4 DFSSILINMSNMTTLEEESSILEFIRQFLLGDFTSLDDP-NLSFLQ-PMESEFPVIKSEPD-----------SPTFCEIIKPEPLDITCLGSSNWTESPQKRSEPKLA---DTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRR 537
            D SSI+   S+ +        ++F       +   LD P ++ FL  P E +  V  S+ D            P     I+  PL I+    + W +   + ++P++      EE+KHYRGVR+RPWGK+AAEIRDP ++GSRVWLGTFD+ ++AA+AYD AAFR+RG KAILNFPLE G   P A    K+R+
Sbjct:   43 DSSSIIFGSSSSSFAP-----IDFSESVCKPEIIDLDTPRSMEFLSIPFEFDSEVSVSDFDFKPSNQNQNQFEPELKSQIRKPPLKISLPAKTEWIQFAAENTKPEVTKPVSEEEKKHYRGVRQRPWGKFAAEIRDPNKRGSRVWLGTFDTAIEAARAYDEAAFRLRGSKAILNFPLEVGKWKPRADEGEKKRK 231          
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF103_ARATH (Ethylene-responsive transcription factor 6 OS=Arabidopsis thaliana GN=ERF6 PE=2 SV=2)

HSP 1 Score: 126.716 bits (317), Expect = 1.512e-28
Identity = 74/196 (37.76%), Postives = 104/196 (53.06%), Query Frame = 1
Query:   91 LGDFTSLDDPNLSFLQ--------------------PMESEFP-------VIKSEPDSPTFCEIIKPEPLDITCLGSSNWTESPQKRSEPKL----ADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSRKRRREKTLDLQESTISII*K 585
            + DFTS D     F +                     ++SE P         +S P   T     KP PL I     + W +      +P+L       EE++HYRGVR RPWGK+AAEIRDP R+G+RVWLGTF++ ++AA+AYD  AFR+RG KAILNFPLE    +P A++ R    ++  D +E  ++++ K
Sbjct:   34 MNDFTSFDQTGFEFSEFETKPEIIDLVTPKPEIFDFDVKSEIPSESNDSFTFQSNPPRVTVQSNRKP-PLKIAPPNRTKWIQFATGNPKPELPVPVVAAEEKRHYRGVRMRPWGKFAAEIRDPTRRGTRVWLGTFETAIEAARAYDKEAFRLRGSKAILNFPLEVDKWNPRAEDGRGLYNKRKRDGEEEEVTVVEK 228          
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF104_ARATH (Ethylene-responsive transcription factor ERF104 OS=Arabidopsis thaliana GN=ERF104 PE=1 SV=1)

HSP 1 Score: 122.479 bits (306), Expect = 2.852e-27
Identity = 74/176 (42.05%), Postives = 103/176 (58.52%), Query Frame = 1
Query:   49 EEESSILEFIRQFLLGDFTSL--DDPNL--SFLQPMESEFP--VIKSEPDSPTFCEIIKPEPLDITCLGSSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNS-----RKRRREK 543
            ++E+  ++FI Q LL DF S+  D P+L  + L    SE     I ++   P      +  PL    +  +  T++ ++         EE +HYRGVRRRPWGKYAAEIRDP +KG R+WLGT+D+ V+A +AYD AAF++RGRKAILNFPL+    S            KR+R+K
Sbjct:    4 KQEALAIDFISQHLLTDFVSMETDHPSLFTNQLHNFHSETGPRTITNQSPKPNSTLNQRKPPLPNLSVSRTVSTKTEKE---------EEERHYRGVRRRPWGKYAAEIRDPNKKGCRIWLGTYDTAVEAGRAYDQAAFQLRGRKAILNFPLDVRVTSETCSGEGVIGLGKRKRDK 170          
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF105_ARATH (Ethylene-responsive transcription factor ERF105 OS=Arabidopsis thaliana GN=ERF105 PE=2 SV=1)

HSP 1 Score: 121.709 bits (304), Expect = 4.865e-27
Identity = 76/180 (42.22%), Postives = 96/180 (53.33%), Query Frame = 1
Query:   31 SNMTTLEEESSILEFIRQFLLGDFTSLDDPNLSFLQPMESEFPVIKSEPDSPTFCEIIKPEPLDITCLGSSNWTESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSPPAKNSR------KRRREKTLD 552
            S+    E++ S L+ I Q LL DF SLD    +      S     K     P    I  P             T +P       +    +++HYRGVRRRPWGKYAAEIRDP +KG RVWLGTFD+ ++AA+ YD AAF++RG KAILNFPLEAG       N +      KR+R+ T D
Sbjct:    4 SHQQQQEQDQSALDLITQHLLTDFPSLDTFASTIHHCTTSTLSQRK-----PPLATIAVP-------------TTAP-------VVQENDQRHYRGVRRRPWGKYAAEIRDPNKKGVRVWLGTFDTAMEAARGYDKAAFKLRGSKAILNFPLEAGKHEDLGDNKKTISLKAKRKRQVTED 158          
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: ERF5_TOBAC (Ethylene-responsive transcription factor 5 OS=Nicotiana tabacum GN=ERF5 PE=2 SV=1)

HSP 1 Score: 119.013 bits (297), Expect = 3.153e-26
Identity = 57/88 (64.77%), Postives = 68/88 (77.27%), Query Frame = 1
Query:  298 ERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADS-------PPAKNSRKRRRE 540
            E+KHYRGVR+RPWGK+AAEIRDP RKG+RVWLGTFD+ ++AAKAYD AAF++RG KAI+NFPLE             PA + RKR RE
Sbjct:  141 EKKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAFKLRGSKAIVNFPLEVANFKQQDNEILQPANSGRKRMRE 228          
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: ERF5_NICSY (Ethylene-responsive transcription factor 5 OS=Nicotiana sylvestris GN=ERF5 PE=2 SV=1)

HSP 1 Score: 117.087 bits (292), Expect = 1.198e-25
Identity = 58/105 (55.24%), Postives = 79/105 (75.24%), Query Frame = 1
Query:  280 KLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEA-------GADSPPAKNSRKRRREKTLDLQESTIS 573
            +LA TE +KHYRGVR+RPWGK+AAEIRDP RKG+RVWLGTFD+ ++AAKAYD AA+++RG KAI+NFPLE          +  P  NS ++R  +T++ ++  I+
Sbjct:  129 ELAPTE-KKHYRGVRQRPWGKFAAEIRDPNRKGTRVWLGTFDTAIEAAKAYDRAAYKLRGSKAIVNFPLEVANFKQEFNNEIRPLVNSSRKRVRETVNEEQLVIN 232          
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: EF101_ARATH (Ethylene-responsive transcription factor 2 OS=Arabidopsis thaliana GN=ERF2 PE=2 SV=1)

HSP 1 Score: 115.931 bits (289), Expect = 2.669e-25
Identity = 64/144 (44.44%), Postives = 83/144 (57.64%), Query Frame = 1
Query:  151 EFPVIKSEPDSPTFCEIIKPEPLDITCLGSSNWT--ESPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSP-PAKNSRKRRREKTLDLQESTIS 573
            +FP +K EP                    + N+T  E   K++ P      + KHYRGVR+RPWGK+AAEIRDPA+ G+RVWLGTF++  DAA AYD AAFRMRG +A+LNFPL   +  P P + + KR    +     ST S
Sbjct:   82 DFPAVKVEP--------------------TENFTAMEEKPKKAIPVTETAVKAKHYRGVRQRPWGKFAAEIRDPAKNGARVWLGTFETAEDAALAYDIAAFRMRGSRALLNFPLRVNSGEPDPVRITSKRSSSSSSSSSSSTSS 205          
BLAST of FC870412 vs. ExPASy Swiss-Prot
Match: ERF1_TOBAC (Ethylene-responsive transcription factor 1 OS=Nicotiana tabacum GN=ERF1 PE=2 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.325e-24
Identity = 54/94 (57.45%), Postives = 69/94 (73.40%), Query Frame = 1
Query:  256 SPQKRSEPKLADTEERKHYRGVRRRPWGKYAAEIRDPARKGSRVWLGTFDSDVDAAKAYDSAAFRMRGRKAILNFPLEAGADSP-PAKNSRKRR 534
            SP + +    A+    +HYRGVRRRPWGK+AAEIRDPA+ G+RVWLGT+++D +AA AYD AA+RMRG KA LNFP   G + P P + + KRR
Sbjct:   87 SPAETTAAPAAELPRGRHYRGVRRRPWGKFAAEIRDPAKNGARVWLGTYETDEEAAIAYDKAAYRMRGSKAHLNFPHRIGLNEPEPVRVTAKRR 180          
The following BLAST results are available for this feature:
BLAST of FC870412 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 111
Match NameE-valueIdentityDescription
EF107_ARATH3.361e-3646.39Ethylene-responsive transcription factor ERF107 OS... [more]
EF106_ARATH1.668e-3548.11Ethylene-responsive transcription factor ERF106 OS... [more]
EF102_ARATH3.256e-3140.72Ethylene-responsive transcription factor 5 OS=Arab... [more]
EF103_ARATH1.512e-2837.76Ethylene-responsive transcription factor 6 OS=Arab... [more]
EF104_ARATH2.852e-2742.05Ethylene-responsive transcription factor ERF104 OS... [more]
EF105_ARATH4.865e-2742.22Ethylene-responsive transcription factor ERF105 OS... [more]
ERF5_TOBAC3.153e-2664.77Ethylene-responsive transcription factor 5 OS=Nico... [more]
ERF5_NICSY1.198e-2555.24Ethylene-responsive transcription factor 5 OS=Nico... [more]
EF101_ARATH2.669e-2544.44Ethylene-responsive transcription factor 2 OS=Arab... [more]
ERF1_TOBAC1.325e-2457.45Ethylene-responsive transcription factor 1 OS=Nico... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA1DA11ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA1DA11, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870412 ID=FC870412; Name=FC870412; organism=Citrus clementina; type=EST; length=814bp
GGGGATTTCAGTTCCATTCTCATTAACATGTCCAACATGACAACGTTGGA
AGAAGAATCATCCATCCTGGAATTCATTCGCCAGTTTCTTCTCGGAGACT
TTACCTCCTTAGACGACCCAAATCTCTCTTTTCTCCAGCCTATGGAGTCA
GAATTCCCTGTGATCAAATCCGAACCCGACTCCCCCACCTTTTGTGAAAT
AATAAAACCTGAACCATTGGACATAACGTGTTTGGGTTCCAGTAATTGGA
CAGAATCACCTCAAAAGCGTTCGGAGCCGAAGCTGGCGGACACTGAAGAG
AGGAAGCATTACAGGGGAGTAAGAAGAAGGCCGTGGGGCAAGTATGCGGC
TGAAATCCGGGACCCGGCAAGAAAGGGCAGCAGGGTTTGGTTGGGAACTT
TTGATAGTGATGTTGATGCTGCTAAAGCTTATGATTCTGCTGCCTTCCGG
ATGAGGGGTCGCAAAGCAATCTTGAATTTCCCTCTGGAGGCTGGAGCTGA
TAGCCCTCCAGCAAAGAACAGTAGGAAAAGAAGAAGAGAGAAGACACTGG
ATTTGCAAGAATCAACCATCTCAATTATCTAGAAAAATAAGACCCTTCTC
AGATTCAGGACCCTCAAATGTATATGTGCTGTTATTACTCTTAGGAAATA
TGTAATTTGCTCCCAAGAAAAAAAAAGTGTCTTGGTTTCCAGTTATAAAG
TTGACTGGGTGCCAGCTCAAAACTCAGATCCGGTAATATTCCGGTTAATC
GGAAGCAAAATATATATGTAACTTGTACATTAGTCAAAAAAAAAAAAAAA
AAAAAAAAAAAAAA
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