FC870414
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870414 vs. ExPASy Swiss-Prot
Match: BADH2_ARATH (Betaine aldehyde dehydrogenase 2, mitochondrial OS=Arabidopsis thaliana GN=ALDH10A9 PE=2 SV=1) HSP 1 Score: 159.844 bits (403), Expect = 7.386e-39 Identity = 69/79 (87.34%), Postives = 74/79 (93.67%), Query Frame = 1 Query: 4 VISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSNEPWGWYKSPSKL 240 V+S DLERCDRVSKAFQAGIVW+NCSQPCF QAPWGG K SGFGRELGEWGL+NYLSVKQVTQY+S+EPWGWYK PSKL Sbjct: 425 VLSNDLERCDRVSKAFQAGIVWVNCSQPCFCQAPWGGTKRSGFGRELGEWGLENYLSVKQVTQYISDEPWGWYKPPSKL 503
BLAST of FC870414 vs. ExPASy Swiss-Prot
Match: BADH1_ARATH (Betaine aldehyde dehydrogenase 1, chloroplastic OS=Arabidopsis thaliana GN=ALDH10A8 PE=2 SV=1) HSP 1 Score: 152.14 bits (383), Expect = 1.540e-36 Identity = 65/77 (84.42%), Postives = 71/77 (92.21%), Query Frame = 1 Query: 4 VISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSNEPWGWYKSPS 234 VIS D ERCDR+S+AF+AGIVWINCSQPCF+QAPWGG K SGFGRELGEWGLDNYLSVKQVT Y SN+PWGWYKSP+ Sbjct: 425 VISNDTERCDRISEAFEAGIVWINCSQPCFTQAPWGGVKRSGFGRELGEWGLDNYLSVKQVTLYTSNDPWGWYKSPN 501
BLAST of FC870414 vs. ExPASy Swiss-Prot
Match: BADH_ORYSJ (Betaine aldehyde dehydrogenase OS=Oryza sativa subsp. japonica GN=Os04g0464200 PE=2 SV=1) HSP 1 Score: 148.288 bits (373), Expect = 2.224e-35 Identity = 64/79 (81.01%), Postives = 72/79 (91.14%), Query Frame = 1 Query: 4 VISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSNEPWGWYKSPSKL 240 VIS DLERC+R+SKA Q+GIVWINCSQPCF QAPWGG K SGFGRELG+WGLDNYLSVKQVT+Y S+EP+GWY+ PSKL Sbjct: 427 VISNDLERCERISKAIQSGIVWINCSQPCFVQAPWGGNKRSGFGRELGQWGLDNYLSVKQVTKYCSDEPYGWYRPPSKL 505
BLAST of FC870414 vs. ExPASy Swiss-Prot
Match: BADH_BETVU (Betaine aldehyde dehydrogenase, chloroplastic OS=Beta vulgaris PE=2 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 1.762e-32 Identity = 57/76 (75.00%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 4 VISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSNEPWGWYKSP 231 V SKDLERC+RVSK ++G VW+NCSQPCF APWGG K SGFGRELGEWG++NYL++KQVT +SNEPWGWYKSP Sbjct: 425 VFSKDLERCERVSKLLESGAVWVNCSQPCFVHAPWGGIKRSGFGRELGEWGIENYLNIKQVTSDISNEPWGWYKSP 500
BLAST of FC870414 vs. ExPASy Swiss-Prot
Match: BADH_SPIOL (Betaine aldehyde dehydrogenase, chloroplastic OS=Spinacia oleracea PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 3.006e-32 Identity = 56/76 (73.68%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 4 VISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSNEPWGWYKSP 231 V S DLERC+R++KA + G VW+NCSQPCF QAPWGG K SGFGRELGEWG+ NYL++KQVTQ +S+EPWGWYKSP Sbjct: 422 VFSNDLERCERITKALEVGAVWVNCSQPCFVQAPWGGIKRSGFGRELGEWGIQNYLNIKQVTQDISDEPWGWYKSP 497
BLAST of FC870414 vs. ExPASy Swiss-Prot
Match: BADH_ATRHO (Betaine aldehyde dehydrogenase, chloroplastic OS=Atriplex hortensis PE=2 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 3.926e-32 Identity = 56/76 (73.68%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 4 VISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSNEPWGWYKSP 231 V SKDLERC+RV+KA + G VW+NCSQPCF APWGG K SGFGRELGEWG++NYL++KQVT +S+EPWGWYKSP Sbjct: 427 VFSKDLERCERVTKALEVGAVWVNCSQPCFVHAPWGGVKRSGFGRELGEWGIENYLNIKQVTSDISDEPWGWYKSP 502
BLAST of FC870414 vs. ExPASy Swiss-Prot
Match: BADH_AMAHP (Betaine aldehyde dehydrogenase, chloroplastic OS=Amaranthus hypochondriacus GN=BADH4 PE=3 SV=1) HSP 1 Score: 134.806 bits (338), Expect = 2.544e-31 Identity = 55/77 (71.43%), Postives = 69/77 (89.61%), Query Frame = 1 Query: 4 VISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVS-NEPWGWYKSP 231 V+SKDL+RC+R++KA + G VW+NCSQPCF+QAPWGG K SGFGRELGEWG++NYL++KQVT+ S +EPWGWYKSP Sbjct: 425 VLSKDLDRCERITKALEVGAVWVNCSQPCFTQAPWGGTKRSGFGRELGEWGIENYLNIKQVTRDTSTDEPWGWYKSP 501
BLAST of FC870414 vs. ExPASy Swiss-Prot
Match: BADH_HORVU (Betaine aldehyde dehydrogenase OS=Hordeum vulgare PE=2 SV=1) HSP 1 Score: 130.568 bits (327), Expect = 4.799e-30 Identity = 57/80 (71.25%), Postives = 66/80 (82.50%), Query Frame = 1 Query: 1 GVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSNEPWGWYKSPSKL 240 GVIS DLERC+R++K +GIVW NCSQP QAPWGG K SGFGRELGEWGL+NYLSVKQVT+Y +E +GWY+ PSKL Sbjct: 426 GVISDDLERCERIAKVIHSGIVWKNCSQPTLVQAPWGGNKRSGFGRELGEWGLENYLSVKQVTRYCKDELYGWYQRPSKL 505
BLAST of FC870414 vs. ExPASy Swiss-Prot
Match: BETB_BACSU (Betaine aldehyde dehydrogenase OS=Bacillus subtilis GN=gbsA PE=1 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 1.499e-15 Identity = 38/75 (50.67%), Postives = 48/75 (64.00%), Query Frame = 1 Query: 4 VISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSNEPWGWYKS 228 V SKD+E+C+RV+ + G VWIN P F+QAPWGG K SGFGRELG+ GL+ Y VK V + W+ S Sbjct: 416 VWSKDIEKCERVAARLRMGTVWINDFHPYFAQAPWGGYKQSGFGRELGKIGLEEYTEVKHVYRNTKPAAVNWFNS 490
BLAST of FC870414 vs. ExPASy Swiss-Prot
Match: AL1A1_RABIT (Retinal dehydrogenase 1 OS=Oryctolagus cuniculus GN=ALDH1A1 PE=2 SV=1) HSP 1 Score: 73.9442 bits (180), Expect = 5.330e-13 Identity = 35/69 (50.72%), Postives = 45/69 (65.22%), Query Frame = 1 Query: 1 GVISKDLERCDRVSKAFQAGIVWINCSQPCFSQAPWGGKKHSGFGRELGEWGLDNYLSVKQVTQYVSNE 207 G+ +KDL++ VS A QAG VW+NC +Q P+GG K SG GRELGE+GL Y VK VT +S + Sbjct: 426 GIFTKDLDKAVTVSSALQAGTVWVNCYSVVSAQVPFGGFKMSGNGRELGEYGLQQYTEVKTVTVKISQK 494 The following BLAST results are available for this feature:
BLAST of FC870414 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 31
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870414 ID=FC870414; Name=FC870414; organism=Citrus clementina; type=EST; length=542bpback to top |