FC870418
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC870418 vs. ExPASy Swiss-Prot
Match: R35A3_ARATH (60S ribosomal protein L35a-3 OS=Arabidopsis thaliana GN=RPL35AC PE=2 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.955e-56 Identity = 103/112 (91.96%), Postives = 107/112 (95.54%), Query Frame = 2 Query: 83 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKAKVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 418 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+QIEGVNT+E+V+WY GKRMAYIYKAK KKNGSHYRCIWGKV RPHGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
BLAST of FC870418 vs. ExPASy Swiss-Prot
Match: R35A1_ARATH (60S ribosomal protein L35a-1 OS=Arabidopsis thaliana GN=RPL35AA PE=3 SV=1) HSP 1 Score: 218.779 bits (556), Expect = 1.955e-56 Identity = 103/112 (91.96%), Postives = 106/112 (94.64%), Query Frame = 2 Query: 83 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKAKVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 418 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSL+Q+EGVNT E+VSWY GKRMAYIYKAK KKNGSHYRCIWGKV RPHGNSGVVRAKF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MVKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLVQVEGVNTTEEVSWYKGKRMAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRAKFTSNLPPKSMGSRVRVFMYPSNI 112
BLAST of FC870418 vs. ExPASy Swiss-Prot
Match: R35A2_ARATH (60S ribosomal protein L35a-2 OS=Arabidopsis thaliana GN=RPL35AB PE=3 SV=1) HSP 1 Score: 212.616 bits (540), Expect = 1.401e-54 Identity = 99/111 (89.19%), Postives = 106/111 (95.50%), Query Frame = 2 Query: 86 VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKAKVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 418 +KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSLIQIEGVNT+E+V+WY GKR+AYIYKAK KKNGSHYRCIWGKV RPHGNSGVVR+KF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLIQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
BLAST of FC870418 vs. ExPASy Swiss-Prot
Match: R35A4_ARATH (60S ribosomal protein L35a-4 OS=Arabidopsis thaliana GN=RPL35AD PE=3 SV=2) HSP 1 Score: 212.231 bits (539), Expect = 1.830e-54 Identity = 98/111 (88.29%), Postives = 106/111 (95.50%), Query Frame = 2 Query: 86 VKGRQGERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKAKVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 418 +KGRQGERVRLYVRGT+LGYKRSKSNQYPNTSL+QIEGVNT+E+V+WY GKR+AYIYKAK KKNGSHYRCIWGKV RPHGNSGVVR+KF SNLPPKSMG RVRVFMYPSNI Sbjct: 1 MKGRQGERVRLYVRGTVLGYKRSKSNQYPNTSLVQIEGVNTQEEVNWYKGKRLAYIYKAKTKKNGSHYRCIWGKVTRPHGNSGVVRSKFTSNLPPKSMGARVRVFMYPSNI 111
BLAST of FC870418 vs. ExPASy Swiss-Prot
Match: RL33A_YEAST (60S ribosomal protein L33-A OS=Saccharomyces cerevisiae GN=RPL33A PE=1 SV=3) HSP 1 Score: 127.487 bits (319), Expect = 5.928e-29 Identity = 61/105 (58.10%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 104 ERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKAKVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 418 E RLYV+G L Y+RSK PN SLI+IEGV T +D +Y GKR+AY+Y+A + GS R +WGKV R HGNSGVVRA F++NLP K+ G VR+F+YPSNI Sbjct: 3 ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQDAQFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
BLAST of FC870418 vs. ExPASy Swiss-Prot
Match: RL33B_YEAST (60S ribosomal protein L33-B OS=Saccharomyces cerevisiae GN=RPL33B PE=1 SV=2) HSP 1 Score: 125.946 bits (315), Expect = 1.725e-28 Identity = 60/105 (57.14%), Postives = 76/105 (72.38%), Query Frame = 2 Query: 104 ERVRLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKAKVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 418 E RLYV+G L Y+RSK PN SLI+IEGV T ++ +Y GKR+AY+Y+A + GS R +WGKV R HGNSGVVRA F++NLP K+ G VR+F+YPSNI Sbjct: 3 ESHRLYVKGKHLSYQRSKRVNNPNVSLIKIEGVATPQEAQFYLGKRIAYVYRASKEVRGSKIRVMWGKVTRTHGNSGVVRATFRNNLPAKTFGASVRIFLYPSNI 107
BLAST of FC870418 vs. ExPASy Swiss-Prot
Match: RL33A_SCHPO (60S ribosomal protein L33-A OS=Schizosaccharomyces pombe GN=rpl33a PE=2 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.236e-26 Identity = 54/102 (52.94%), Postives = 74/102 (72.55%), Query Frame = 2 Query: 113 RLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKAKVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 418 RLYV+ L ++RSK +P TSL++IEG ++KE+ +Y GKR+ ++YK+ GS R IWG V+RPHGNSGVVRA+F NLPPK+ G +RV +YPSN+ Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSLVKIEGCDSKEEAQFYLGKRICFVYKSNKPVRGSKIRVIWGTVSRPHGNSGVVRARFTHNLPPKTFGASLRVMLYPSNV 108
BLAST of FC870418 vs. ExPASy Swiss-Prot
Match: RL33B_SCHPO (60S ribosomal protein L33-B OS=Schizosaccharomyces pombe GN=rpl33b PE=1 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 6.135e-26 Identity = 53/102 (51.96%), Postives = 72/102 (70.59%), Query Frame = 2 Query: 113 RLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKAKVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 418 RLYV+ L ++RSK +P TS+++IEG ++KE+ +Y GKR+ Y+YK+ GS R IWG +ARPHGNSG VRA+F NLP K+ G +RV +YPSNI Sbjct: 7 RLYVKAKHLSFQRSKHVIHPGTSIVKIEGCDSKEEAQFYLGKRVCYVYKSSKAVRGSKIRVIWGTIARPHGNSGAVRARFVHNLPAKTFGSSLRVMLYPSNI 108
BLAST of FC870418 vs. ExPASy Swiss-Prot
Match: RL35A_DICDI (60S ribosomal protein L35a OS=Dictyostelium discoideum GN=rpl35a PE=3 SV=1) HSP 1 Score: 117.087 bits (292), Expect = 8.012e-26 Identity = 53/103 (51.46%), Postives = 79/103 (76.70%), Query Frame = 2 Query: 113 RLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYK-AKVKKNGSHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 418 ++Y +G +LGY+RS++ QYPN SLI+IEGV ++ED ++Y GK++ + K +K KN + ++ WGK+ + HG+SGVV+A+F NLPPK+MG VRV +YPSNI Sbjct: 3 KIYSKGVVLGYRRSQATQYPNISLIKIEGVVSREDSTFYLGKKVCLVSKVSKSAKNPTGHKISWGKICKTHGSSGVVQARFARNLPPKAMGAPVRVMLYPSNI 105
BLAST of FC870418 vs. ExPASy Swiss-Prot
Match: RL35A_CAEEL (60S ribosomal protein L35a OS=Caenorhabditis elegans GN=rpl-33 PE=1 SV=3) HSP 1 Score: 117.087 bits (292), Expect = 8.012e-26 Identity = 56/108 (51.85%), Postives = 73/108 (67.59%), Query Frame = 2 Query: 113 RLYVRGTILGYKRSKSNQYPNTSLIQIEGVNTKEDVSWYCGKRMAYIYKA--KVKKNG----SHYRCIWGKVARPHGNSGVVRAKFKSNLPPKSMGDRVRVFMYPSNI 418 RLYV+ G+KR Q +TSL+++EGV KED +Y GKR+ Y+YKA K K G + R IWGK+ RPHGN+G VRAKF N+PP ++G R+RV +YPSNI Sbjct: 17 RLYVKAIFTGFKRGLRTQSEHTSLLKLEGVFNKEDAGFYAGKRVVYLYKAHNKTLKTGHTVATRTRAIWGKITRPHGNAGAVRAKFHHNIPPSALGKRIRVLLYPSNI 124 The following BLAST results are available for this feature:
BLAST of FC870418 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 18
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870418 ID=FC870418; Name=FC870418; organism=Citrus clementina; type=EST; length=646bpback to top |