FC870419

Overview
NameFC870419
Unique NameFC870419
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length933
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC870419 vs. ExPASy Swiss-Prot
Match: AAPC_CENCI (Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris PE=2 SV=1)

HSP 1 Score: 147.517 bits (371), Expect = 1.021e-34
Identity = 98/259 (37.84%), Postives = 137/259 (52.90%), Query Frame = 1
Query:  202 LPKVVLTSAGGSEAELYLFGGCVTSWKASNDKDLLFVRPDAVFNKKKPISGGVPHCFPQFGP-GPMQQHGFARNMDWSI-LDSENVEGNPVI----TLELKDGPYSRAMWDFSFRALFKVILNTK---SISTELTITNTDNKPFSFSSALHTYFRASVTGASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAPS-VVHLDNGLGDTITIRNTNWSDAVLWNPHLQM--------EACYKDFVCVENA 924
            L KVVL  A    AE+YL+GG VTSWK  N ++LLF+   A+F   K I GG+P C PQFG  G ++QHGFARN  WSI  D   +  NP I     L L+       +W  SF    +V L      S+++ +  TNTD +PFS++ A HTYF   V+  S   ++G +T++   + K      E+ D + F   VD +YL APS +  +D+    T  +      DAV+WNP  +         +A YK+ +CVE A
Sbjct:   33 LEKVVLRGARNCCAEIYLYGGQVTSWKNDNGEELLFLSSKAIFKPPKAIRGGIPICLPQFGTHGNLEQHGFARNRFWSIDNDPPPLPVNPAIKAFVDLILRPAEEDLKIWPHSFEFRLRVALGPSGDLSLTSRIRNTNTDGRPFSYTFAYHTYF--FVSDISEVRVEGLETMDYLDNLKAKERFTEQGDAIVFESEVDKVYLAAPSKIAIIDHEKKKTFVVTKEGLPDAVVWNPWDKKAKAMQDFGDAEYKNMLCVEPA 289          
BLAST of FC870419 vs. ExPASy Swiss-Prot
Match: YEAD_ECOLI (Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli (strain K12) GN=yeaD PE=1 SV=2)

HSP 1 Score: 94.7449 bits (234), Expect = 7.853e-19
Identity = 77/245 (31.43%), Postives = 113/245 (46.12%), Query Frame = 1
Query:  238 EAELYLFGGCVTSWKASNDKDLLFVRPDAVFNKKKPISGGVPHCFPQFGPGPMQ---QHGFARNMDWSILDSENVEGNPVITLELKDGPYSRAMW--DFSFRALFKVILNTKSISTELTITNTDNKPFSFSSALHTYFR-ASVTGASVKGLKGCKTLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAP--SVVHLDNGLGDTITIRNTNWSDAVLWNPHLQMEAC--------YKDFVCVENA 924
            +A   L G  + SWK + ++++L++  +  F     I GGVP C+P FGP   Q    HGFARN+ W++           +T EL     ++  W  DF+  A F+V    K+   +L      +  F  +SALHTYF    +   SV GL G + ++K  D K   E        TFP   D +YL+    SV++ D  L   I + + +  + V WNP   +           YK FVCVE A
Sbjct:   37 KASFALQGAHLLSWKPAGEEEVLWLSNNTPFKNGVAIRGGVPVCWPWFGPAAQQGLPAHGFARNLPWTLKSHHEDADGVALTFELTQSEETKKFWPHDFTLLAHFRV---GKTCEIDL----ESHGEFETTSALHTYFNVGDIAKVSVSGL-GDRFIDKVNDAK---ENVLTDGIQTFPDRTDRVYLNPQDCSVIN-DEALNRIIAVGHQHHLNVVGWNPGPALSISMGDMPDDGYKTFVCVETA 269          
BLAST of FC870419 vs. ExPASy Swiss-Prot
Match: YMY9_YEAST (Glucose-6-phosphate 1-epimerase OS=Saccharomyces cerevisiae GN=YMR099C PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.637e-16
Identity = 71/254 (27.95%), Postives = 110/254 (43.31%), Query Frame = 1
Query:  208 KVVLTSAGGSEAELYL--FGGCVTSWKASNDKDLLFVRPDAVFNKKKPISGGVPHCFPQFGP-------GPMQQHGFARNMDWSILDSENVEGNPVITLELKD---GPYSRAMWDFSFRALFKVILNTKSISTELTITNT-DNKPFSFSSALHTYFR-ASVTGASVKGLKGCK----TLNKDPDPKNPMEGKEERDRVTFPGFVDCIYLDAP---SVVHLDNGLGDTITIRNTNWSDAVLWNPHLQMEACYKDF 906
            +VVLT        +++  +G  V SWK  +++ L ++   A  +  KP+ GG+P  FP FG          + QHG ARN  W  L  +  E  P +   LK     P    +W   +  +  V L +  + T + + NT  +K   F+   HTYFR   + G  V  L G K     L +    K+P+        VTF    D IY +     ++  +D G+    T++  N  D V+WNP ++      DF
Sbjct:    9 EVVLTHPADETTSVHILKYGATVYSWKLKSEEQL-WLSTAAKLDGSKPVRGGIPLVFPVFGKNSTDEHLSKLPQHGLARNSTWEFL-GQTKENPPTVQFGLKPEIANPELTKLWPMDYLLILTVELGSDYLKTAIEVENTSSSKELKFNWLFHTYFRIEDIEGTMVSNLAGMKLYDQLLKESYVDKHPV--------VTFNQETDVIYQNVSAERAIQIVDKGV-QIHTLKRYNLPDTVVWNPWIEKSQGMADF 251          
The following BLAST results are available for this feature:
BLAST of FC870419 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 3
Match NameE-valueIdentityDescription
AAPC_CENCI1.021e-3437.84Putative glucose-6-phosphate 1-epimerase OS=Cenchr... [more]
YEAD_ECOLI7.853e-1931.43Putative glucose-6-phosphate 1-epimerase OS=Escher... [more]
YMY9_YEAST1.637e-1627.95Glucose-6-phosphate 1-epimerase OS=Saccharomyces c... [more]
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Properties
Property NameValue
Genbank descriptionKN0AAA1DB08ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA1DB08, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870419 ID=FC870419; Name=FC870419; organism=Citrus clementina; type=EST; length=933bp
GGGGAGAAAATAGCCGATCGTTAAGTTGAAGCGCCAGAATCAATCGAATT
TTTAATGGCAACGGCTTCAATGCCCTTTTCGCTCCCCAGCCTAAACTACC
GGGCTGTACGAGTAGGACGAGTCAATCGAAAACAAGGTGTGGCCTTTGCA
ACAATGAATAAAGAAACTTTAGGAGTGCGAGTGACAGAAGGTGAAGGCAG
TTTGCCCAAGGTTGTGCTTACTTCTGCTGGCGGTAGTGAAGCTGAGCTAT
ATCTGTTTGGAGGATGTGTTACATCGTGGAAAGCTTCTAATGACAAAGAT
CTCCTTTTTGTTAGACCTGATGCTGTTTTTAACAAGAAAAAACCTATCAG
TGGAGGAGTTCCACATTGCTTCCCACAGTTTGGACCTGGCCCAATGCAGC
AGCATGGATTTGCAAGGAATATGGATTGGTCCATTCTTGACTCAGAAAAT
GTGGAAGGAAATCCTGTTATAACTCTGGAGCTAAAGGATGGTCCTTACAG
TCGTGCCATGTGGGATTTCAGTTTTCGAGCTTTATTCAAGGTCATTCTAA
ATACCAAGAGTATTTCTACAGAGTTGACCATCACAAACACAGACAACAAG
CCATTTTCGTTTAGTTCTGCTTTGCACACATACTTCAGGGCTTCTGTCAC
AGGAGCATCTGTGAAAGGTTTGAAAGGTTGCAAAACTTTAAATAAAGACC
CAGATCCTAAAAATCCAATGGAGGGAAAGGAGGAAAGGGATAGGGTCACT
TTTCCTGGATTTGTAGATTGCATTTACCTTGATGCCCCGAGTGTGGTACA
CCTTGACAATGGCTTGGGTGATACAATAACTATCCGCAATACAAATTGGT
CAGATGCTGTTTTATGGAACCCACATCTGCAGATGGAAGCATGCTACAAA
GATTTTGTTTGCGTTGAAAATGCTAAGAATGGA
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