FC870565

Overview
NameFC870565
Unique NameFC870565
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length590
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig9613 contig Ccv1_Contig9613:1..590. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC870565 vs. ExPASy Swiss-Prot
Match: Y1754_ARATH (Uncharacterized protein At1g77540 OS=Arabidopsis thaliana GN=At1g77540 PE=1 SV=2)

HSP 1 Score: 161.77 bits (408), Expect = 2.350e-39
Identity = 77/104 (74.04%), Postives = 87/104 (83.65%), Query Frame = 3 
Query:   24 KSEKEIPKIVWNESKRRFETEDKEAYVEYVVRENRKVMDLVHTYVPSSKRGLGLASHLCRAAFNHAKSHSMSIIPTCSYVSDTYLPRNPTWNSIIYSEDPRSSI 335
            K   E PKIVWNE KRRFETED EA++EY +R N KVMDLVHTYVPS KRGLGLASHLC AAF HA SHS+SIIP+CSYVSDT+LPRNP+W  +I+SE  +SSI
Sbjct:   11 KMATEPPKIVWNEGKRRFETEDHEAFIEYKMRNNGKVMDLVHTYVPSFKRGLGLASHLCVAAFEHASSHSISIIPSCSYVSDTFLPRNPSWKPLIHSEVFKSSI 114
The following BLAST results are available for this feature:
BLAST of FC870565 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 1
Match NameE-valueIdentityDescription
Y1754_ARATH2.350e-3974.04Uncharacterized protein At1g77540 OS=Arabidopsis t... [more]
back to top
Properties
Property NameValue
Genbank descriptionKN0AAA2AB09ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA2AB09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870565 ID=FC870565; Name=FC870565; organism=Citrus clementina; type=EST; length=590bp
GGGGGAGAGGGGAGATGGCAACGAAATCAGAGAAGGAGATACCAAAGATC
GTGTGGAACGAGAGCAAGCGGAGGTTCGAAACGGAAGACAAAGAAGCTTA
CGTTGAATATGTGGTAAGAGAAAATAGAAAAGTGATGGACTTGGTTCACA
CATACGTGCCAAGTTCAAAAAGAGGCTTAGGCTTGGCTTCTCATCTCTGT
CGTGCTGCCTTCAATCATGCCAAATCTCACTCCATGTCCATCATCCCCAC
TTGCTCTTACGTCTCTGACACTTATCTTCCTCGGAATCCAACCTGGAATT
CTATCATATACTCAGAAGATCCCAGATCTAGCATATAAATGTCGCCATCT
TTAACTTTTCAGGTGCCTGTGTAATTGTTTGTGATCCAAGTGAAGGTTCT
GTTCTCTTATCTCTCAGGCTCACACTATTGAGGCCTATAATTATTGCAGA
TACAGAATAGCCATTTTCCTTTGCCTATTGCAAATAATATGCACTCACTG
TATTTAAAAAAGTGCACATCCCTGTGATATCATAATTTATGTTGGGTTGC
CATTTGCTCTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
back to top