FC870674

Overview
NameFC870674
Unique NameFC870674
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length787
Libraries
Library NameType
AbsAOv1cdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig11231 contig Ccv1_Contig11231:231..1017. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: CHKB_MOUSE (Choline/ethanolamine kinase OS=Mus musculus GN=Chkb PE=1 SV=3)

HSP 1 Score: 94.7449 bits (234), Expect = 6.001e-19
Identity = 55/184 (29.89%), Postives = 101/184 (54.89%), Query Frame = 1
Query:  214 DALQVIPLKGAMTNEVYQIAWP---AKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRK-ALLWDRLRRWVSVAKSF--CSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMI 747
            + L V P+ G ++N +++ + P       G  R VL+R+YG  ++   +   E   F  ++ +  GP+L G F +GR+E+++ +R L   ++RDP +S  +A +M  FH ++MP  ++   L+  + R++   +     S        +Y+LKDE++ L K L +    + FCHND+Q GNI++
Sbjct:   67 EELSVCPVSGGLSNLLFRCSLPNHVPSVGGEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYLPSRPLKTQELRDPVLSGAIATRMARFHGMEMPFTKEPRWLFGTMERYLKQIQDLPSTSLPQMNLVEMYSLKDEMNSLRKLLDDTPSPVVFCHNDIQEGNILL 250          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: CHKB_HUMAN (Choline/ethanolamine kinase OS=Homo sapiens GN=CHKB PE=1 SV=3)

HSP 1 Score: 93.2041 bits (230), Expect = 1.746e-18
Identity = 54/184 (29.35%), Postives = 102/184 (55.43%), Query Frame = 1
Query:  214 DALQVIPLKGAMTNEVYQIAWPAKNNGL---VRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKA-LLWDRLRRWVSVAKSF--CSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMI 747
            + L+V P+ G ++N +++ + P     +    R VL+R+YG  ++   +   E   F  ++ +  GP+L G F +GR+E++I +R L   ++R+P +S  +A KM +FH ++MP  ++   L+  + R++   +        +     +Y+LKDE+  L K L +    + FCHND+Q GNI++
Sbjct:   67 EELRVYPVSGGLSNLLFRCSLPDHLPSVGEEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYIPSRPLKTQELREPVLSAAIATKMAQFHGMEMPFTKEPHWLFGTMERYLKQIQDLPPTGLPEMNLLEMYSLKDEMGNLRKLLESTPSPVVFCHNDIQEGNILL 250          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: CHKB_RAT (Choline/ethanolamine kinase OS=Rattus norvegicus GN=Chkb PE=1 SV=3)

HSP 1 Score: 92.4337 bits (228), Expect = 2.978e-18
Identity = 55/184 (29.89%), Postives = 99/184 (53.80%), Query Frame = 1
Query:  214 DALQVIPLKGAMTNEVYQIAWP---AKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRK-ALLWDRLRRWVSVAKSF--CSAKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMI 747
            + L V P+ G ++N +++ + P       G  R VL+R+YG  ++   +   E   F  ++ +  GP+L G F +GR+E+++ +R L   ++RDP +S  +A KM  FH ++MP  ++   L+  + R++   +     S        +Y+LKDE++ L   L      + FCHND+Q GNI++
Sbjct:   67 EELSVCPVSGGLSNLLFRCSLPNHVPSMGGEPREVLLRLYGAILQGVDSLVLESVMFAILAERSLGPQLYGVFPEGRLEQYLPSRPLKTQELRDPVLSGAIATKMARFHGMEMPFTKEPRWLFGTMERYLKQIQDLPSTSLPQMNLVEMYSLKDEMNHLRTLLDATPSPVVFCHNDIQEGNILL 250          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: KICH_SCHPO (Putative choline kinase OS=Schizosaccharomyces pombe GN=SPAC13G7.12c PE=2 SV=1)

HSP 1 Score: 89.3521 bits (220), Expect = 2.521e-17
Identity = 64/203 (31.53%), Postives = 102/203 (50.25%), Query Frame = 1
Query:  220 LQVIPLKGAMTNEVYQIAWPAKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKAL----LWDRLRRWVSVAKSFC-----SAKDAKEFCLYTLKDEISMLEK---ELPNDHQE-----IGFCHNDLQYGNIM-IDEKTSSITI 774
            L +  + GA+TN VY +A P   +     +L+RIYG  VE+F NR  E+   + ++    GP L+G F +GR E+++ + TL+   IRDPK+S  V  ++ E H+  +  P + L     W     W+  AK+       S     EF + TL+++ +       E   D ++     + F HND QYGN++ I  K  SI +
Sbjct:   63 LHIKRISGALTNAVYYVAPPEGYHA--PKLLLRIYGPHVELFINRQVELENLKRLARHNIGPYLIGEFSNGRFEQYMESTTLTCKTIRDPKLSIYVGRRLCELHNFILLHPHEVLEMPAAWKNCLVWLPKAKAKILGRKHSLAITSEF-MKTLEEDFNAYYNWFVEWSRDKKDWFGLKMVFSHNDTQYGNLLKIKAKKRSIPL 262          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: KICH_YEAST (Choline kinase OS=Saccharomyces cerevisiae GN=CKI1 PE=1 SV=1)

HSP 1 Score: 80.8777 bits (198), Expect = 8.968e-15
Identity = 61/214 (28.50%), Postives = 106/214 (49.53%), Query Frame = 1
Query:  163 KVLQSVASDWGDVIDDSDALQVIPLKGAMTNEVYQIAWPAKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFI-HARTLSAADIRDPKISELVAAKMREFHD----LKMPGPRKALLWDRLRRWV-SVAKSFCSAKDAKE-----FCLYTLK--DEISMLEKELPNDHQEIG-------FCHNDLQYGNIM 744
            K +Q VA D          + ++ + GAMTN ++++ +P      + ++L+RIYG  ++   +R+ E++    +S +  GP L G F +GR E+F+ +++TL+  DIR+ K S+ +A +M+E H     L       +  W ++ +W+ ++ K      D K       C    K  D +    K L +  Q I        FCHND QYGN++
Sbjct:  139 KKIQPVAQD----------MNLVKISGAMTNAIFKVEYPK-----LPSLLLRIYGPNIDNIIDREYELQILARLSLKNIGPSLYGCFVNGRFEQFLENSKTLTKDDIRNWKNSQRIARRMKELHVGVPLLSSERKNGSACWQKINQWLRTIEKVDQWVGDPKNIENSLLCENWSKFMDIVDRYHKWLISQEQGIEQVNKNLIFCHNDAQYGNLL 337          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: EKIA_DICDI (Probable ethanolamine kinase A OS=Dictyostelium discoideum GN=etnkA PE=3 SV=1)

HSP 1 Score: 80.4925 bits (197), Expect = 1.171e-14
Identity = 50/191 (26.18%), Postives = 89/191 (46.60%), Query Frame = 1
Query:  220 LQVIPLKGAMTNEVYQIAWP-AKNNGLVRNVLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGPRKALLWDRLRRWVSVAKSFCSAKDAKEFC----LYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEKTSSITII 777
            L +  L G +TN +Y +     +       V++R+YG   E   +R +E+         G G +  G F +G +  FI    L+  DI  P +   +A ++ ++H ++MP  +   LW  +++W ++A       +  E+     +  + +E  MLE+ L   +  I FCHNDL  GNI+ D   +  + I
Sbjct:   44 LTIQKLNGGITNVLYLVEDKNIEQKYRYLPVVIRLYGYKSEEIIDRKNELIIQTEADQNGLGAKFYGLFDNGCIYGFIKGEPLAYEDISKPTMQTCIAKEIAQWHSIEMPTRKNPSLWPTIKKWAALAPDVYPVPEKNEYYQSINVKKMIEEGKMLEQRLAQLNSPIVFCHNDLLSGNIIYDPSQNCASFI 234          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: CHKA_MOUSE (Choline kinase alpha OS=Mus musculus GN=Chka PE=1 SV=2)

HSP 1 Score: 80.4925 bits (197), Expect = 1.171e-14
Identity = 59/208 (28.37%), Postives = 97/208 (46.63%), Query Frame = 1
Query:  214 DALQVIPLKGAMTNEVYQIAWP---AKNNGLVRNVLVRIYG----------EGVEVFFNRDD---------EIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMP-GPRKALLWDRLRRWVSVAKSFCSAKDAK-----EFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDE 753
            D   +  ++G ++N ++Q + P   A      R VL+R+YG          EG E   N ++         E   F  ++ +  GP+L G F  GR+E+FI +R L   ++R P IS  +A KM  FH +KMP       L+  + ++++       +++A+     +   Y L  E+  L   L      + FCHND Q GNI++ E
Sbjct:  105 DQFHISVIRGGLSNMLFQCSLPDSIASVGDEPRKVLLRLYGAILKMRSCNKEGSEQAQNENEFQGAEAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELRLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLNQVLRLKFSREARVQQLHKILSYNLPLELENLRSLLQYTRSPVVFCHNDCQEGNILLLE 312          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: EKI2_HUMAN (Ethanolamine kinase 2 OS=Homo sapiens GN=ETNK2 PE=2 SV=2)

HSP 1 Score: 80.1073 bits (196), Expect = 1.530e-14
Identity = 45/159 (28.30%), Postives = 83/159 (52.20%), Query Frame = 1
Query:  307 VLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGP-RKALLWDRLRRWVSVAKSFCS-AKDAKEFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEKTSSITII 777
            VLVR+YGE  E+  +R++E+R F+ + +    P+L   F +G   E++    L    IR+P++  L+A +M + H +   G   K +LW ++  + ++ K+  + +  A    +  L+ E++ L++ L      + FCHNDL   NI+ D     +  I
Sbjct:  109 VLVRVYGERTELLVDRENEVRNFQLLRAHSCAPKLYCTFQNGLCYEYMQGVALEPEHIREPRLFRLIALEMAKIHTIHANGSLPKPILWHKMHNYFTLVKNEINPSLSADVPKVEVLERELAWLKEHLSQLESPVVFCHNDLLCKNIIYDSIKGHVRFI 267          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: CHKA_RAT (Choline kinase alpha OS=Rattus norvegicus GN=Chka PE=2 SV=2)

HSP 1 Score: 79.7221 bits (195), Expect = 1.998e-14
Identity = 59/208 (28.37%), Postives = 97/208 (46.63%), Query Frame = 1
Query:  214 DALQVIPLKGAMTNEVYQIAWP---AKNNGLVRNVLVRIYG----------EGVEVFFNRDD---------EIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMP-GPRKALLWDRLRRWVSVAKSFCSAKDAK-----EFCLYTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDE 753
            D   +  ++G ++N ++Q + P   A      R VL+R+YG          EG E   N ++         E   F  ++ +  GP+L G F  GR+E+FI +R L   ++  P IS  +A KM  FH +KMP       L+  + ++++       +++A+     +F  Y L  E+  L   L      + FCHND Q GNI++ E
Sbjct:  105 DQFHISVIRGGLSNMLFQCSLPDSIASVGDEPRKVLLRLYGAILKMRSCNKEGSEQAQNENEFQGAEAMVLESVMFAILAERSLGPKLYGIFPQGRLEQFIPSRRLDTEELCLPDISAEIAEKMATFHGMKMPFNKEPKWLFGTMEKYLNQVLRLKFSREARVQQLHKFLSYNLPLELENLRSLLQYTRSPVVFCHNDCQEGNILLLE 312          
BLAST of FC870674 vs. ExPASy Swiss-Prot
Match: EKI1_HUMAN (Ethanolamine kinase 1 OS=Homo sapiens GN=ETNK1 PE=1 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 2.209e-13
Identity = 46/165 (27.88%), Postives = 84/165 (50.91%), Query Frame = 1
Query:  307 VLVRIYGEGVEVFFNRDDEIRTFECMSSQGQGPRLLGRFGDGRVEEFIHARTLSAADIRDPKISELVAAKMREFHDLKMPGP--RKALLWDRLRRWVSVAKSFCSAKDAKEFCL------YTLKDEISMLEKELPNDHQEIGFCHNDLQYGNIMIDEKTSSITII 777
            VLVRIYG   E+  +RD+E+++F  + + G  P+L   F +G   EFI    L    + +P I  L+A ++ + H +        K+ LW ++ ++ S+  +  + +D  +  L        L++E++ +++ L N    +  CHNDL   NI+ +EK   +  I
Sbjct:  164 VLVRIYGNKTELLVDRDEEVKSFRVLQAHGCAPQLYCTFNNGLCYEFIQGEALDPKHVCNPAIFRLIARQLAKIHAIHAHNGWIPKSNLWLKMGKYFSLIPTGFADEDINKRFLSDIPSSQILQEEMTWMKEILSNLGSPVVLCHNDLLCKNIIYNEKQGDVQFI 328          
The following BLAST results are available for this feature:
BLAST of FC870674 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 14
Match NameE-valueIdentityDescription
CHKB_MOUSE6.001e-1929.89Choline/ethanolamine kinase OS=Mus musculus GN=Chk... [more]
CHKB_HUMAN1.746e-1829.35Choline/ethanolamine kinase OS=Homo sapiens GN=CHK... [more]
CHKB_RAT2.978e-1829.89Choline/ethanolamine kinase OS=Rattus norvegicus G... [more]
KICH_SCHPO2.521e-1731.53Putative choline kinase OS=Schizosaccharomyces pom... [more]
KICH_YEAST8.968e-1528.50Choline kinase OS=Saccharomyces cerevisiae GN=CKI1... [more]
EKIA_DICDI1.171e-1426.18Probable ethanolamine kinase A OS=Dictyostelium di... [more]
CHKA_MOUSE1.171e-1428.37Choline kinase alpha OS=Mus musculus GN=Chka PE=1 ... [more]
EKI2_HUMAN1.530e-1428.30Ethanolamine kinase 2 OS=Homo sapiens GN=ETNK2 PE=... [more]
CHKA_RAT1.998e-1428.37Choline kinase alpha OS=Rattus norvegicus GN=Chka ... [more]
EKI1_HUMAN2.209e-1327.88Ethanolamine kinase 1 OS=Homo sapiens GN=ETNK1 PE=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAA2AH12ZM1 AbsAOv1 Citrus clementina cDNA clone KN0AAA2AH12, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC870674 ID=FC870674; Name=FC870674; organism=Citrus clementina; type=EST; length=787bp
GGGGGGCCTTGCTTTCATCCTTCTTGACAACTCAGTTTTTCTCTTCCTCT
TAGGTGAAGTTTTTAATTTTCGTTGCAATCACCACTTTGTGCTGAGCTGA
CTACAAGAAAGGCTATAAAGACAACTGAATTGTTACCAAGTTCTTCTCCA
GAAGAATTAAAGAAAGTTCTTCAATCAGTTGCTTCCGACTGGGGAGATGT
TATCGATGATTCGGATGCATTGCAGGTGATTCCATTAAAAGGTGCAATGA
CTAATGAGGTTTACCAAATAGCGTGGCCTGCAAAAAATAATGGTCTTGTT
AGAAACGTTTTGGTCCGGATTTATGGAGAAGGCGTCGAGGTTTTCTTCAA
TAGGGATGATGAAATTAGAACCTTTGAGTGCATGTCAAGCCAAGGCCAGG
GGCCCAGGCTTCTCGGGCGGTTCGGTGATGGAAGAGTTGAGGAGTTCATT
CATGCCAGGACACTGTCGGCTGCTGACATCCGTGACCCCAAAATCTCTGA
GTTGGTAGCGGCAAAGATGAGAGAATTTCATGATCTCAAAATGCCTGGTC
CAAGGAAAGCACTACTATGGGACAGACTGAGGAGATGGGTTAGTGTGGCC
AAAAGTTTCTGTTCTGCTAAAGATGCAAAGGAATTCTGCTTGTATACTCT
GAAGGATGAAATCAGTATGCTGGAGAAAGAGTTGCCAAATGACCATCAAG
AGATTGGCTTTTGTCACAATGATCTTCAGTATGGAAACATTATGATTGAC
GAAAAGACCAGCTCAATTACTATAATTGTAAGTTTTA
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