FC870827
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC870827 vs. ExPASy Swiss-Prot
Match: RS272_ARATH (40S ribosomal protein S27-2 OS=Arabidopsis thaliana GN=RPS27B PE=2 SV=2) HSP 1 Score: 152.14 bits (383), Expect = 1.309e-36 Identity = 70/85 (82.35%), Postives = 75/85 (88.24%), Query Frame = 2 Query: 5 VLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRAKLTEGCSFKKKGD 259 VLQNDIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ++LCQPTGG+AKLTEGCSF++KGD Sbjct: 2 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTILCQPTGGKAKLTEGCSFRRKGD 86
BLAST of FC870827 vs. ExPASy Swiss-Prot
Match: RS27_HORVU (40S ribosomal protein S27 OS=Hordeum vulgare GN=RPS27 PE=3 SV=2) HSP 1 Score: 145.976 bits (367), Expect = 9.380e-35 Identity = 68/85 (80.00%), Postives = 73/85 (85.88%), Query Frame = 2 Query: 5 VLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRAKLTEGCSFKKKGD 259 VLQNDIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVC CQ+VLCQPTGG+A+LTEGCSF++KGD Sbjct: 2 VLQNDIDLLNPPAELEKLKHKKKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCPGCQTVLCQPTGGKARLTEGCSFRRKGD 86
BLAST of FC870827 vs. ExPASy Swiss-Prot
Match: RS271_ARATH (40S ribosomal protein S27-1 OS=Arabidopsis thaliana GN=RPS27A PE=2 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 2.729e-34 Identity = 67/83 (80.72%), Postives = 72/83 (86.75%), Query Frame = 2 Query: 5 VLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRAKLTEGCSFKKK 253 VLQNDIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CGNCQ++LC PTGG+AKLTEGCSF+KK Sbjct: 2 VLQNDIDLLNPPAELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGNCQTLLCTPTGGKAKLTEGCSFRKK 84
BLAST of FC870827 vs. ExPASy Swiss-Prot
Match: RS273_ARATH (40S ribosomal protein S27-3 OS=Arabidopsis thaliana GN=RPS27D PE=1 SV=2) HSP 1 Score: 141.739 bits (356), Expect = 1.769e-33 Identity = 66/83 (79.52%), Postives = 71/83 (85.54%), Query Frame = 2 Query: 5 VLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRAKLTEGCSFKKK 253 VLQNDIDLL+PP RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQ+VLCQPTGG+A+L EGCSF+KK Sbjct: 2 VLQNDIDLLHPPPELEKRKHKLKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQTVLCQPTGGKARLQEGCSFRKK 84
BLAST of FC870827 vs. ExPASy Swiss-Prot
Match: RS27_CHLRE (40S ribosomal protein S27 OS=Chlamydomonas reinhardtii GN=RPS27 PE=3 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 1.073e-30 Identity = 62/85 (72.94%), Postives = 68/85 (80.00%), Query Frame = 2 Query: 5 VLQNDIDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRAKLTEGCSFKKKGD 259 VL +DIDLLNPPA RLVQSPNSFFMDVKCQGCFNITTVFSHSQTVV+CG+C SVLC PTG +LTEGCSF++K D Sbjct: 2 VLSSDIDLLNPPAELEKTKHKRKRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVMCGSCSSVLCTPTGWPRRLTEGCSFRRKSD 86
BLAST of FC870827 vs. ExPASy Swiss-Prot
Match: RS27_SCHPO (40S ribosomal protein S27 OS=Schizosaccharomyces pombe GN=rps27 PE=2 SV=1) HSP 1 Score: 116.701 bits (291), Expect = 6.094e-26 Identity = 52/78 (66.67%), Postives = 61/78 (78.21%), Query Frame = 2 Query: 20 IDLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRAKLTEGCSFKKK 253 +DLLNP +LVQ P SFFMDVKC GCFNITTVFSH+QTVV+CG+C SVLCQPTGG+A+L EGCSF++K Sbjct: 5 VDLLNPSHESEMRKHKLKQLVQGPRSFFMDVKCPGCFNITTVFSHAQTVVICGSCASVLCQPTGGKARLMEGCSFRRK 82
BLAST of FC870827 vs. ExPASy Swiss-Prot
Match: RS27_XENLA (40S ribosomal protein S27 OS=Xenopus laevis GN=rps27 PE=3 SV=2) HSP 1 Score: 111.694 bits (278), Expect = 1.960e-24 Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 23 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRAKLTEGCSFKKK 253 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+A+LTEGCSF++K Sbjct: 6 DLLHPTPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of FC870827 vs. ExPASy Swiss-Prot
Match: RS27_RAT (40S ribosomal protein S27 OS=Rattus norvegicus GN=Rps27 PE=2 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 1.960e-24 Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 23 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRAKLTEGCSFKKK 253 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+A+LTEGCSF++K Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of FC870827 vs. ExPASy Swiss-Prot
Match: RS27_MOUSE (40S ribosomal protein S27 OS=Mus musculus GN=Rps27 PE=1 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 1.960e-24 Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 23 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRAKLTEGCSFKKK 253 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+A+LTEGCSF++K Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82
BLAST of FC870827 vs. ExPASy Swiss-Prot
Match: RS27_HUMAN (40S ribosomal protein S27 OS=Homo sapiens GN=RPS27 PE=1 SV=3) HSP 1 Score: 111.694 bits (278), Expect = 1.960e-24 Identity = 50/77 (64.94%), Postives = 60/77 (77.92%), Query Frame = 2 Query: 23 DLLNPPAXXXXXXXXXXRLVQSPNSFFMDVKCQGCFNITTVFSHSQTVVVCGNCQSVLCQPTGGRAKLTEGCSFKKK 253 DLL+P RLVQSPNS+FMDVKC GC+ ITTVFSH+QTVV+C C +VLCQPTGG+A+LTEGCSF++K Sbjct: 6 DLLHPSPEEEKRKHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRRK 82 The following BLAST results are available for this feature:
BLAST of FC870827 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 23
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Sequences
The
following sequences are available for this feature:
EST sequence >FC870827 ID=FC870827; Name=FC870827; organism=Citrus clementina; type=EST; length=504bpback to top |